Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060719
CDS Infomation

pacid=37474429 polypeptide=PGSC0003DMP400040858 locus=PGSC0003DMG400023614 ID=PGSC0003DMT400060719.v4.03 annot-version=v4.03
Sequence

ATGCCTAGAAATATTGGTTGTTTATCCAAGCTCGAGAAGTTCTTGATTGGCAATAACCCA
ATAAAAGGGACTATTCCCACTTCATTGGGAAATATTTCCACTCTGCAATATATTTATTGT
GGAAGCAGTCGCATAGTGGGGCGAATTCCTCCGGAATTAGGGAAGCTATCAAATTTGAGG
CAATTAAGCTTTGACAACAATTCTAATCTTATTGGTCAAATTCCAGAGGCTATTTTCAAC
ATTTCTTCTTTGGAACTGATTGGATTTGCTTTCAACAACCTCTCCGGGAGAATTCAAGCT
ACTACAGCTATTCATCTTCCGAACCTTAAAGAACTTTTCTTGGGAGTCAATCAGCTGGAA
GGGGAAATTCCATTGTTCATAACAAATGCTTCCAAGCTTGAGACACTGTCGCTAGCACGG
AGCTTTCTGACAGGAACTATTCCCACTAATTTGGGAAATCTTCGTGAGCTACGAAATCTG
TTCCTATATGATAATCAACTTACCAATGAACCAACAGAGCGTGAGTTGAGATTCTTCAAT
TCTTTGGCGGACTGTTGGATGTTGCGATATATATCAGTGGGTTCCAATCCGTTGAATAGC
GTTCTGCCCAATTCTATTGGGAATCTTTCATCTACTATTGAATACATTTATATAGGAGAT
GCACACATCAACGGCCCCATCCCCACAAGTATAGGCAACATGAGCGGTCTTACATCCCTA
GTCTTTAATGAAAACAACTTGATGGGGAGTATTCCTCCTGAGATTGGTAGTATTCCTAAG
TCTTTGGAAAAACTCTACTACCTTAAAAGCATTAATGTTTCATTTAATGATTTAGAAGGT
GAAATACCGAGTGGTGGCGTGTTTGCAAATTCCACTCTGCAATCATTTCTTGGGAACAAA
GGTCTATGTGGAATGCACATATTGGAGATTCCTGCTTGCGCTATCAATAATCCTGGAAAA
CAATCAAAGCTAAAGGAGGTTCTGCTAAAAATTGTTACTCCGGTGGTTATATCATCCTTT
CTGATATTCTTGTTGGTTTCAATTTGGATAATGAAACGACAAAAGAAAGGGAGGTCCAAA
GATGTGGAGAAGGTACTGGAGATCGGGACTCATCAATTAGTTTCTTATCACGAGATTCAA
CGAGCAACAAATAATTTTGATGAATCCAATTTAATTGGTGAGGGAAGCTCTGGCTCTGTG
TACAAAGGCACATTGTTTGGTGGAACTGCAGTGGCCATAAAGGTTCTCGATTTGGAAAAT
GAGCAAGTATCCAAAAGGTTTGATACCGAATGCGAAGTGATGAGAAATGTTAGACACAGA
AATCTTGTTTCAGTGATTACTACGTGTTCTAGTGACTATATAAGAGCCTTTGTTCTGCGA
TATATGCCCAATGGAAGTCTTGAGAATTGGCTGTACGAAGAAGATCGCCACTTGAACCTT
CATCAGAGAGTCACTGTAATGATTGATGCAGCTATGGCAGTTGAATATCTACATCATGGT
CATGTCACTTCAATAGTTCATTGCGACTTAAAGCCAGCCAACATTCTTTTGGATGAAGCT
ATGGTGGTTCATGTTGGTGATTTTGGAATCTCTAAAATTTTAGCCATAAGCAAGTCCATA
GCTTATACGGAGACATTGGGCACTCTTGGATACATAGCACCAGAATATGGCTCAGAGGGA
ATAGTGTCTACTTGTGGTGATGTTTATAGCTATGGCATCATGTTGATGGAGGTTTTGACC
AAAAGAAGGCCAACAGATGAAGAGATATGCAATGAAAATCTTGACTTGAGGAAATGGATC
ACACAATCATTTTCAGGGACTATGATGGACGTTGTGGATGCCAATATGTTTTCTGAGGAA
GAACAAATCACTTGTAAAAGTGAAATATGCATAGCCTCCATGATAGAATTGGCTTTGGAC
TGCACTAAGGAAACGCCAGAATCAAGAGTGACCATGAAAGAAGTAGTGAAGAGGCTTAAC
AAAATCAACAACACATTTCAAGAATCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400040858
PEP Infomation

pacid=37474429 transcript=PGSC0003DMT400060719 locus=PGSC0003DMG400023614 ID=PGSC0003DMT400060719.v4.03 annot-version=v4.03
Sequence

MPRNIGCLSKLEKFLIGNNPIKGTIPTSLGNISTLQYIYCGSSRIVGRIPPELGKLSNLR
QLSFDNNSNLIGQIPEAIFNISSLELIGFAFNNLSGRIQATTAIHLPNLKELFLGVNQLE
GEIPLFITNASKLETLSLARSFLTGTIPTNLGNLRELRNLFLYDNQLTNEPTERELRFFN
SLADCWMLRYISVGSNPLNSVLPNSIGNLSSTIEYIYIGDAHINGPIPTSIGNMSGLTSL
VFNENNLMGSIPPEIGSIPKSLEKLYYLKSINVSFNDLEGEIPSGGVFANSTLQSFLGNK
GLCGMHILEIPACAINNPGKQSKLKEVLLKIVTPVVISSFLIFLLVSIWIMKRQKKGRSK
DVEKVLEIGTHQLVSYHEIQRATNNFDESNLIGEGSSGSVYKGTLFGGTAVAIKVLDLEN
EQVSKRFDTECEVMRNVRHRNLVSVITTCSSDYIRAFVLRYMPNGSLENWLYEEDRHLNL
HQRVTVMIDAAMAVEYLHHGHVTSIVHCDLKPANILLDEAMVVHVGDFGISKILAISKSI
AYTETLGTLGYIAPEYGSEGIVSTCGDVYSYGIMLMEVLTKRRPTDEEICNENLDLRKWI
TQSFSGTMMDVVDANMFSEEEQITCKSEICIASMIELALDCTKETPESRVTMKEVVKRLN
KINNTFQES*

Transcript Sequence

Transcript ID

PGSC0003DMT400060719
Transcript Infomation

pacid=37474429 locus=PGSC0003DMG400023614 ID=PGSC0003DMT400060719.v4.03 annot-version=v4.03
Sequence

ATGCCTAGAAATATTGGTTGTTTATCCAAGCTCGAGAAGTTCTTGATTGGCAATAACCCA
ATAAAAGGGACTATTCCCACTTCATTGGGAAATATTTCCACTCTGCAATATATTTATTGT
GGAAGCAGTCGCATAGTGGGGCGAATTCCTCCGGAATTAGGGAAGCTATCAAATTTGAGG
CAATTAAGCTTTGACAACAATTCTAATCTTATTGGTCAAATTCCAGAGGCTATTTTCAAC
ATTTCTTCTTTGGAACTGATTGGATTTGCTTTCAACAACCTCTCCGGGAGAATTCAAGCT
ACTACAGCTATTCATCTTCCGAACCTTAAAGAACTTTTCTTGGGAGTCAATCAGCTGGAA
GGGGAAATTCCATTGTTCATAACAAATGCTTCCAAGCTTGAGACACTGTCGCTAGCACGG
AGCTTTCTGACAGGAACTATTCCCACTAATTTGGGAAATCTTCGTGAGCTACGAAATCTG
TTCCTATATGATAATCAACTTACCAATGAACCAACAGAGCGTGAGTTGAGATTCTTCAAT
TCTTTGGCGGACTGTTGGATGTTGCGATATATATCAGTGGGTTCCAATCCGTTGAATAGC
GTTCTGCCCAATTCTATTGGGAATCTTTCATCTACTATTGAATACATTTATATAGGAGAT
GCACACATCAACGGCCCCATCCCCACAAGTATAGGCAACATGAGCGGTCTTACATCCCTA
GTCTTTAATGAAAACAACTTGATGGGGAGTATTCCTCCTGAGATTGGTAGTATTCCTAAG
TCTTTGGAAAAACTCTACTACCTTAAAAGCATTAATGTTTCATTTAATGATTTAGAAGGT
GAAATACCGAGTGGTGGCGTGTTTGCAAATTCCACTCTGCAATCATTTCTTGGGAACAAA
GGTCTATGTGGAATGCACATATTGGAGATTCCTGCTTGCGCTATCAATAATCCTGGAAAA
CAATCAAAGCTAAAGGAGGTTCTGCTAAAAATTGTTACTCCGGTGGTTATATCATCCTTT
CTGATATTCTTGTTGGTTTCAATTTGGATAATGAAACGACAAAAGAAAGGGAGGTCCAAA
GATGTGGAGAAGGTACTGGAGATCGGGACTCATCAATTAGTTTCTTATCACGAGATTCAA
CGAGCAACAAATAATTTTGATGAATCCAATTTAATTGGTGAGGGAAGCTCTGGCTCTGTG
TACAAAGGCACATTGTTTGGTGGAACTGCAGTGGCCATAAAGGTTCTCGATTTGGAAAAT
GAGCAAGTATCCAAAAGGTTTGATACCGAATGCGAAGTGATGAGAAATGTTAGACACAGA
AATCTTGTTTCAGTGATTACTACGTGTTCTAGTGACTATATAAGAGCCTTTGTTCTGCGA
TATATGCCCAATGGAAGTCTTGAGAATTGGCTGTACGAAGAAGATCGCCACTTGAACCTT
CATCAGAGAGTCACTGTAATGATTGATGCAGCTATGGCAGTTGAATATCTACATCATGGT
CATGTCACTTCAATAGTTCATTGCGACTTAAAGCCAGCCAACATTCTTTTGGATGAAGCT
ATGGTGGTTCATGTTGGTGATTTTGGAATCTCTAAAATTTTAGCCATAAGCAAGTCCATA
GCTTATACGGAGACATTGGGCACTCTTGGATACATAGCACCAGAATATGGCTCAGAGGGA
ATAGTGTCTACTTGTGGTGATGTTTATAGCTATGGCATCATGTTGATGGAGGTTTTGACC
AAAAGAAGGCCAACAGATGAAGAGATATGCAATGAAAATCTTGACTTGAGGAAATGGATC
ACACAATCATTTTCAGGGACTATGATGGACGTTGTGGATGCCAATATGTTTTCTGAGGAA
GAACAAATCACTTGTAAAAGTGAAATATGCATAGCCTCCATGATAGAATTGGCTTTGGAC
TGCACTAAGGAAACGCCAGAATCAAGAGTGACCATGAAAGAAGTAGTGAAGAGGCTTAAC
AAAATCAACAACACATTTCAAGAATCATAG