Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060674
CDS Infomation

pacid=37473621 polypeptide=PGSC0003DMP400040838 locus=PGSC0003DMG400023602 ID=PGSC0003DMT400060674.v4.03 annot-version=v4.03
Sequence

ATGGTTTCGCTAGAAAATTCTCATTCTCATGTTTCTTCTACTACCCATTACTCCCAAACA
CGGCCTTATTACTATACTCCACCGCCGTCCTCCGCCAAAGTTCACCGACGTTCAATCGGC
CGGTCCATGCGCACTATCCGGTCCAATTTGTACCAAACCGACTACGAAAACTCCGGTCCG
GTTTATGAGAACCTTACAGATTCCGTCGTTGATTTTCGCCTTACTGAGCTAGCGAAGAAG
CCGCCGGTTGATAAATCTTCTTTTTCCGATGTGGAATTTCTGGACATTTCCCATACTTTC
AGTGATTTCTCGGCGTATAGCAGTGATATTTCCGGCGAGTTGGAACGTTTAGCTTACATC
CCAAATTCGGATCCGAATCAGAGTTCCGTTAGTGAACCCGAACCGGAACCGGAACCTTGT
GTAGGGTTTCTGCAGCGGGAGACATTTTCGACAGAGATAATGGAAAGCATTGAGCCGGAG
GATCTTCAGCCGACGGTGAAACTCTGCGTCGACAGTTTACAGTCACCGTCGGTTGCCGTG
AAAAGATCGGCGGCGGAGAAATTGAGGTTTTTAGCTAAAAATCGAGCTGATAATCGTGCT
TTAATCGGAGAGTCTGGTGCTATTCCGGCATTGTTACCACTTCTCCGGTGCTCCGATCCA
CGGACTCAGGAACACGCTGTAACAGCTCTTCTCAATCTGTCGCTTCACGAACCGAATAAA
ACCTTAATTACAAACTCCGGGGCGATAAAATCTTTGATTTACGTGTTGAAAACGGGCACT
GAAACTTCGAAACAGAATGCAGCTTGTGGGTTGCTAAGCTTAGCTTTGATAGATGAGAAT
AAGTTATCCATTGGTGCTTGTGGTGCTATTGCCCCATTAGTGGCACTGTTAATAAACGGG
ACGAATCGGGGAAAGAAGGATGCTCTAACGACGTTGTATAAGCTATGCACGGTGAGATTG
AATAAAGAACGGGCAGTGAGTGCTGGTGCTGTGAAACCATTGGTGGGGTTAGTGTGTGAG
GAGGGAACAGGGTTAGCTGAGAAGGCTATGGTGGTGTTAAGTAGCTTAACGGGTATCGAG
ATGGGGCAAGAAAGTATAGTTGAGGAAGGAGGAATTGCTGCACTTGTGGAAGTGATTGAA
GATGGATCGGATAAAGGGAAGGAATTTGCAGTGATGACTCTTTTGCAGCTATGTGTTGAT
AGTGTAAGGAATAGAGGACTTCTTGTTAGGGAAGGAGGAATCCCTCCTCTCGTCGCCTTG
TCGCAGACCGGAACTGCTAAAGCTAAGCACAAGGCAGAAACATTACTGACATACTTGAGG
GAATCAAGACAAGAAGCTTCTACTTCAACTCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040838
PEP Infomation

pacid=37473621 transcript=PGSC0003DMT400060674 locus=PGSC0003DMG400023602 ID=PGSC0003DMT400060674.v4.03 annot-version=v4.03
Sequence

MVSLENSHSHVSSTTHYSQTRPYYYTPPPSSAKVHRRSIGRSMRTIRSNLYQTDYENSGP
VYENLTDSVVDFRLTELAKKPPVDKSSFSDVEFLDISHTFSDFSAYSSDISGELERLAYI
PNSDPNQSSVSEPEPEPEPCVGFLQRETFSTEIMESIEPEDLQPTVKLCVDSLQSPSVAV
KRSAAEKLRFLAKNRADNRALIGESGAIPALLPLLRCSDPRTQEHAVTALLNLSLHEPNK
TLITNSGAIKSLIYVLKTGTETSKQNAACGLLSLALIDENKLSIGACGAIAPLVALLING
TNRGKKDALTTLYKLCTVRLNKERAVSAGAVKPLVGLVCEEGTGLAEKAMVVLSSLTGIE
MGQESIVEEGGIAALVEVIEDGSDKGKEFAVMTLLQLCVDSVRNRGLLVREGGIPPLVAL
SQTGTAKAKHKAETLLTYLRESRQEASTSTP*

Transcript Sequence

Transcript ID

PGSC0003DMT400060674
Transcript Infomation

pacid=37473621 locus=PGSC0003DMG400023602 ID=PGSC0003DMT400060674.v4.03 annot-version=v4.03
Sequence

ATGGTTTCGCTAGAAAATTCTCATTCTCATGTTTCTTCTACTACCCATTACTCCCAAACA
CGGCCTTATTACTATACTCCACCGCCGTCCTCCGCCAAAGTTCACCGACGTTCAATCGGC
CGGTCCATGCGCACTATCCGGTCCAATTTGTACCAAACCGACTACGAAAACTCCGGTCCG
GTTTATGAGAACCTTACAGATTCCGTCGTTGATTTTCGCCTTACTGAGCTAGCGAAGAAG
CCGCCGGTTGATAAATCTTCTTTTTCCGATGTGGAATTTCTGGACATTTCCCATACTTTC
AGTGATTTCTCGGCGTATAGCAGTGATATTTCCGGCGAGTTGGAACGTTTAGCTTACATC
CCAAATTCGGATCCGAATCAGAGTTCCGTTAGTGAACCCGAACCGGAACCGGAACCTTGT
GTAGGGTTTCTGCAGCGGGAGACATTTTCGACAGAGATAATGGAAAGCATTGAGCCGGAG
GATCTTCAGCCGACGGTGAAACTCTGCGTCGACAGTTTACAGTCACCGTCGGTTGCCGTG
AAAAGATCGGCGGCGGAGAAATTGAGGTTTTTAGCTAAAAATCGAGCTGATAATCGTGCT
TTAATCGGAGAGTCTGGTGCTATTCCGGCATTGTTACCACTTCTCCGGTGCTCCGATCCA
CGGACTCAGGAACACGCTGTAACAGCTCTTCTCAATCTGTCGCTTCACGAACCGAATAAA
ACCTTAATTACAAACTCCGGGGCGATAAAATCTTTGATTTACGTGTTGAAAACGGGCACT
GAAACTTCGAAACAGAATGCAGCTTGTGGGTTGCTAAGCTTAGCTTTGATAGATGAGAAT
AAGTTATCCATTGGTGCTTGTGGTGCTATTGCCCCATTAGTGGCACTGTTAATAAACGGG
ACGAATCGGGGAAAGAAGGATGCTCTAACGACGTTGTATAAGCTATGCACGGTGAGATTG
AATAAAGAACGGGCAGTGAGTGCTGGTGCTGTGAAACCATTGGTGGGGTTAGTGTGTGAG
GAGGGAACAGGGTTAGCTGAGAAGGCTATGGTGGTGTTAAGTAGCTTAACGGGTATCGAG
ATGGGGCAAGAAAGTATAGTTGAGGAAGGAGGAATTGCTGCACTTGTGGAAGTGATTGAA
GATGGATCGGATAAAGGGAAGGAATTTGCAGTGATGACTCTTTTGCAGCTATGTGTTGAT
AGTGTAAGGAATAGAGGACTTCTTGTTAGGGAAGGAGGAATCCCTCCTCTCGTCGCCTTG
TCGCAGACCGGAACTGCTAAAGCTAAGCACAAGGCAGAAACATTACTGACATACTTGAGG
GAATCAAGACAAGAAGCTTCTACTTCAACTCCTTAG