Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060673
CDS Infomation

pacid=37471641 polypeptide=PGSC0003DMP400040837 locus=PGSC0003DMG400023601 ID=PGSC0003DMT400060673.v4.03 annot-version=v4.03
Sequence

ATGGGATCAGAGGGTTCTGAAAAGGATCTCGTAGTGACTCAAATTAGTGTTGGTGGGTTC
AGCAATGATGTCAATGCGAAAATGCTTTCAGAATGTCTGGAAGACCAAGTTGGACAAGTG
TGGAGGTGTAGATTAAAGACTTCATCCACTCCTCCTGACTCTTACCCGACTTATGACATT
GATGTAGAGAACGTGCGAAGAATGAACAATTACATAAAAGTGGAACCTCATGCATTTGTT
CATTTTGCATCTTCAGAGTCCGCACAGAATGCTCTTGCTGCTGCTAGGCGTGATGAACTC
TTCTTAGAAGAGAAGCCTTTGAAGGTTAGTTTGGGTCCTGAGAATCCCTTTAATATGAAT
AAGAGGAGAAGAACTATCATGCCTTTTAAGTTTTCAGACGTTGGTGTAGAAATTGGAGTA
CTGGTTAGTAATGATGACTTTGTGGTTGGTTGGAGGGGACCTCATTCTGGTGTTAACTTT
CTTGTGGATCCATTCAATGGGACATGCAAAATACTTTTCACAAGGGATACTGCTTTCTGC
TTCAAGGGTGAAGGAAAACATGCCGTTATAAAATGCAATTTCAAGATTGAGTTTTTGCTG
AGGGAAATCAATGAGATTAACGAATGCAAAGACTTTGCATCTTTGGTATTATTGTTGCAG
CTGACTTCATCTCCATTGGTTTTCTATAGAACTGCTGATGATGACATTGAAGAATCAGTT
GCTTTTGACTTATTAGATGACGATGATCAGTGGATCCGAACCACTGACATTACATGTAGT
GGAGCCATTGGTAGGTTTAATACCTACCGTATTTCAATTCGACCTCGCAATGGTCCTAGC
CTTAAGAAGGCCATGAACTATTTCAGAGAAAGTAGGGTGCCTGTGGTAGAACAGGGTAAC
AGGCAGATGCTCCGGGTGAGAGATGAGCCTGATTTTGGGGTGTCCCTCTCAGAACCTTTC
TTCTGCTTTCAAAACCATGAAGGTATAAGCTTTAAGGTCTTGTTTCTGGTAAATGCGGTT
TTGCAAAAAGGCATAGTTAATCAGCATCAGATGACTGCTGAATTCTTTTCTTTGCTTAGA
AAGCATCAGGAGGGGGTAAATTTAGCTGCACTGAAGCACATCTTTTCTTACAAAAGGCCT
GTCAATGATGCTATTCAGAAGTTAGCAAGTGTCCAGAAATGGCTATTTAAGAATCCTAAC
CTTCTCGAGAGAACTGGACAGTTGGATGATGTTGTAGAGGTTAGAAGGTTGGTTATTACC
CCAACCAAAGCATACTGTCTTCCGCCAACTGTGGAGCTATCCAATAGAGTCCTCAGGAAG
TATAAGCATGTTTCAGATCGATTTTTGCGAGTTACTTTTATGGATGAGGGCATGCGTAAC
TTGAACAGGAATGTTCTGACATACTATGCTGCTACTATTGTGAGAGAAATTACATCAAGT
TCTAATCCCCAGAGAACTGGAATCTTCCAAAGGGTGAAAAGTATTCTGAGTAAAGGATTT
TATCTGTGTGGTCGAAGGTATTCTTTTTTGGCTTTCTCAGCTAACCAGCTGAGGGATCGT
TCTGCCTGGTTTTTTGCTGAAGCCCCGGAAATTAGGGTGCCCAACATCATAAACTGGATG
GGTAAGTTCGGTAACAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAGTGCTTTTCA
TCAACCTATGCAACAGTGGAAGTCCTTCCAAGCGAGGTTAACTCCGAGCTTCCAGATATA
GAAAGAAATGGGTATGTTTTCTCTGATGGAATAGGCATGATGTCAGCAGATCTATCTATA
GAAGTTGCAGCGAAGTTGCAATTAAGTGTCAATCCTCCTTGTGCTTATCAGATAAGGTAT
GCTGGTTGTAAAGGTGTTGTCGCATGTTGGCCGGCAGAGAAAGATGGTATCCGCCTTTCT
CTGAGACCAAGTATGAAGAAATTTGACTCAAATCACACTATCCTTGAAATCTGCTCTTGG
ACGAGATTACAGCCTGGTTTTCTGAACCGGCAAATAATAACCTTGCTCTCGTCCTTGGAA
GTTAAAGATGAAATGTTTTGGGAAATGCAGAAAGAAATGTTATCAAAGTTGGATAAGATA
CTTGTGGATTCGGACGTGGCTTTTGATGTAATTACAGCTTCATGTGCCGAGGCAGGAAAT
ACAGCGGCTATAATGTTGAGTGCAGGGTTTAAACCTCAAAGTGAACCTCATTTGAGAGGG
ATGTTGGCTAGCATTAGAGCTGCTCAACTCGGCGACCTCCGGAATAAGACAAGGATGTTT
GTTCCTTCAGGAAGGTGGTTGATGGGCTGTTTGGATGAATTACGTAAACTTGAGCAAGGC
CAATGCTTTATTCAAGTGTCAAGCCCTTCTTTGGAGACCTGTTTTGTTAAGCATGGTCCA
AAGTTTTCTGAAATCAAGAAAAATCTTCAAGTAATAAAGGGCCTTGTTGTAATTGCAAAG
AACCCGTGTCTTCATCCCGGGGATGTGAGGATTCTGGAGGCTGTAGATGTTCCTGGTTTA
CACCATCTCTATGATTGTCTGGTCTTCCCTCAGAAAGGGGATAGGCCACATTCAAATGAA
GCATCAGGGAGTGACCTTGATGGTGATCTCTACTTTGTGACTTGGGATGAAAATCTCATT
CCACCCAGTAAGAAAAGCTGGATGCCAATGGACTATGCACCTGCAGAAGCCAAACAGTTG
GGTCGTCAAGTTCAGCATACGGACATAATAGATTTTTTCTCAAAGAACATGGTCCAAGAG
AGTCTAGGAGAAATCTGCAACGCACATGTGGTTCATGCTGACCTCAGTGAATTTGGAGCT
TTGGATGAGAAGTGCCTTAAATTGGCAGAACTTGCTGCTCTAGCCGTTGATTTCCCCAAA
ACTGGAAAACTTGTCACCATGCCATTTGACCTCAAACCAAAAATGTATCCCGACTTCATG
GGGAAAGAGCCGTTTCAAACATACGAGTCAAAGAAAATTTTGGGCAAATTATATAGGCAA
GTTATAGATGTATATGATGCAGAGGGTGGAGAATCTTCTGGACTTGAGTTTGTCCCTAAA
GACATCCCATATGACACTAATATTGAGATTCTGGGATATGAAGATTTCATAGATGATGCG
TGGAACCACAAATGTTCTTATGATGGTCAGTTGAATGGGCTTTTAGGACAATACAAAGTT
AATGGGGAGGAAGAGGTGGTTACTGGACATATATGGTCCATGCCGAAGTACAGTGCTAAG
AAGCAAGGGGAATTAAAAGAGAGGCTGAAGCACGCATATAATACGTTGAGGAAGGAGTTC
AGGAATGTTTTCGAGCAGATGGAACCTGATTTTGATATGCTTCCCGTTGATGAGAAGAAT
GATATGTATGAAAGAAAGGCATCTGCGTGGTATCGGGTCACCTACCATCCTCATTGGGTG
ACTAGATCACTAGAGTTGCAATTGCCAGATGCTGTTTCAAATGGTGTTATGTTAAGTTTT
GCTTGGATTGCAGCAGATTACATTGCTCGAATTAAAATTAGACAACGGGGAATGCAAAAT
TCTGACTCTACCAAGCCTATCAATTTCCTTGGAAGGTATCTTGTTAACAAGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400040837
PEP Infomation

pacid=37471641 transcript=PGSC0003DMT400060673 locus=PGSC0003DMG400023601 ID=PGSC0003DMT400060673.v4.03 annot-version=v4.03
Sequence

MGSEGSEKDLVVTQISVGGFSNDVNAKMLSECLEDQVGQVWRCRLKTSSTPPDSYPTYDI
DVENVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFNMN
KRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTAFC
FKGEGKHAVIKCNFKIEFLLREINEINECKDFASLVLLLQLTSSPLVFYRTADDDIEESV
AFDLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQGN
RQMLRVRDEPDFGVSLSEPFFCFQNHEGISFKVLFLVNAVLQKGIVNQHQMTAEFFSLLR
KHQEGVNLAALKHIFSYKRPVNDAIQKLASVQKWLFKNPNLLERTGQLDDVVEVRRLVIT
PTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSS
SNPQRTGIFQRVKSILSKGFYLCGRRYSFLAFSANQLRDRSAWFFAEAPEIRVPNIINWM
GKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMSADLSI
EVAAKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSW
TRLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGN
TAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVPSGRWLMGCLDELRKLEQG
QCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGL
HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQL
GRQVQHTDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK
TGKLVTMPFDLKPKMYPDFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEFVPK
DIPYDTNIEILGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAK
KQGELKERLKHAYNTLRKEFRNVFEQMEPDFDMLPVDEKNDMYERKASAWYRVTYHPHWV
TRSLELQLPDAVSNGVMLSFAWIAADYIARIKIRQRGMQNSDSTKPINFLGRYLVNKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400060673
Transcript Infomation

pacid=37471641 locus=PGSC0003DMG400023601 ID=PGSC0003DMT400060673.v4.03 annot-version=v4.03
Sequence

ATGGGATCAGAGGGTTCTGAAAAGGATCTCGTAGTGACTCAAATTAGTGTTGGTGGGTTC
AGCAATGATGTCAATGCGAAAATGCTTTCAGAATGTCTGGAAGACCAAGTTGGACAAGTG
TGGAGGTGTAGATTAAAGACTTCATCCACTCCTCCTGACTCTTACCCGACTTATGACATT
GATGTAGAGAACGTGCGAAGAATGAACAATTACATAAAAGTGGAACCTCATGCATTTGTT
CATTTTGCATCTTCAGAGTCCGCACAGAATGCTCTTGCTGCTGCTAGGCGTGATGAACTC
TTCTTAGAAGAGAAGCCTTTGAAGGTTAGTTTGGGTCCTGAGAATCCCTTTAATATGAAT
AAGAGGAGAAGAACTATCATGCCTTTTAAGTTTTCAGACGTTGGTGTAGAAATTGGAGTA
CTGGTTAGTAATGATGACTTTGTGGTTGGTTGGAGGGGACCTCATTCTGGTGTTAACTTT
CTTGTGGATCCATTCAATGGGACATGCAAAATACTTTTCACAAGGGATACTGCTTTCTGC
TTCAAGGGTGAAGGAAAACATGCCGTTATAAAATGCAATTTCAAGATTGAGTTTTTGCTG
AGGGAAATCAATGAGATTAACGAATGCAAAGACTTTGCATCTTTGGTATTATTGTTGCAG
CTGACTTCATCTCCATTGGTTTTCTATAGAACTGCTGATGATGACATTGAAGAATCAGTT
GCTTTTGACTTATTAGATGACGATGATCAGTGGATCCGAACCACTGACATTACATGTAGT
GGAGCCATTGGTAGGTTTAATACCTACCGTATTTCAATTCGACCTCGCAATGGTCCTAGC
CTTAAGAAGGCCATGAACTATTTCAGAGAAAGTAGGGTGCCTGTGGTAGAACAGGGTAAC
AGGCAGATGCTCCGGGTGAGAGATGAGCCTGATTTTGGGGTGTCCCTCTCAGAACCTTTC
TTCTGCTTTCAAAACCATGAAGGTATAAGCTTTAAGGTCTTGTTTCTGGTAAATGCGGTT
TTGCAAAAAGGCATAGTTAATCAGCATCAGATGACTGCTGAATTCTTTTCTTTGCTTAGA
AAGCATCAGGAGGGGGTAAATTTAGCTGCACTGAAGCACATCTTTTCTTACAAAAGGCCT
GTCAATGATGCTATTCAGAAGTTAGCAAGTGTCCAGAAATGGCTATTTAAGAATCCTAAC
CTTCTCGAGAGAACTGGACAGTTGGATGATGTTGTAGAGGTTAGAAGGTTGGTTATTACC
CCAACCAAAGCATACTGTCTTCCGCCAACTGTGGAGCTATCCAATAGAGTCCTCAGGAAG
TATAAGCATGTTTCAGATCGATTTTTGCGAGTTACTTTTATGGATGAGGGCATGCGTAAC
TTGAACAGGAATGTTCTGACATACTATGCTGCTACTATTGTGAGAGAAATTACATCAAGT
TCTAATCCCCAGAGAACTGGAATCTTCCAAAGGGTGAAAAGTATTCTGAGTAAAGGATTT
TATCTGTGTGGTCGAAGGTATTCTTTTTTGGCTTTCTCAGCTAACCAGCTGAGGGATCGT
TCTGCCTGGTTTTTTGCTGAAGCCCCGGAAATTAGGGTGCCCAACATCATAAACTGGATG
GGTAAGTTCGGTAACAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAGTGCTTTTCA
TCAACCTATGCAACAGTGGAAGTCCTTCCAAGCGAGGTTAACTCCGAGCTTCCAGATATA
GAAAGAAATGGGTATGTTTTCTCTGATGGAATAGGCATGATGTCAGCAGATCTATCTATA
GAAGTTGCAGCGAAGTTGCAATTAAGTGTCAATCCTCCTTGTGCTTATCAGATAAGGTAT
GCTGGTTGTAAAGGTGTTGTCGCATGTTGGCCGGCAGAGAAAGATGGTATCCGCCTTTCT
CTGAGACCAAGTATGAAGAAATTTGACTCAAATCACACTATCCTTGAAATCTGCTCTTGG
ACGAGATTACAGCCTGGTTTTCTGAACCGGCAAATAATAACCTTGCTCTCGTCCTTGGAA
GTTAAAGATGAAATGTTTTGGGAAATGCAGAAAGAAATGTTATCAAAGTTGGATAAGATA
CTTGTGGATTCGGACGTGGCTTTTGATGTAATTACAGCTTCATGTGCCGAGGCAGGAAAT
ACAGCGGCTATAATGTTGAGTGCAGGGTTTAAACCTCAAAGTGAACCTCATTTGAGAGGG
ATGTTGGCTAGCATTAGAGCTGCTCAACTCGGCGACCTCCGGAATAAGACAAGGATGTTT
GTTCCTTCAGGAAGGTGGTTGATGGGCTGTTTGGATGAATTACGTAAACTTGAGCAAGGC
CAATGCTTTATTCAAGTGTCAAGCCCTTCTTTGGAGACCTGTTTTGTTAAGCATGGTCCA
AAGTTTTCTGAAATCAAGAAAAATCTTCAAGTAATAAAGGGCCTTGTTGTAATTGCAAAG
AACCCGTGTCTTCATCCCGGGGATGTGAGGATTCTGGAGGCTGTAGATGTTCCTGGTTTA
CACCATCTCTATGATTGTCTGGTCTTCCCTCAGAAAGGGGATAGGCCACATTCAAATGAA
GCATCAGGGAGTGACCTTGATGGTGATCTCTACTTTGTGACTTGGGATGAAAATCTCATT
CCACCCAGTAAGAAAAGCTGGATGCCAATGGACTATGCACCTGCAGAAGCCAAACAGTTG
GGTCGTCAAGTTCAGCATACGGACATAATAGATTTTTTCTCAAAGAACATGGTCCAAGAG
AGTCTAGGAGAAATCTGCAACGCACATGTGGTTCATGCTGACCTCAGTGAATTTGGAGCT
TTGGATGAGAAGTGCCTTAAATTGGCAGAACTTGCTGCTCTAGCCGTTGATTTCCCCAAA
ACTGGAAAACTTGTCACCATGCCATTTGACCTCAAACCAAAAATGTATCCCGACTTCATG
GGGAAAGAGCCGTTTCAAACATACGAGTCAAAGAAAATTTTGGGCAAATTATATAGGCAA
GTTATAGATGTATATGATGCAGAGGGTGGAGAATCTTCTGGACTTGAGTTTGTCCCTAAA
GACATCCCATATGACACTAATATTGAGATTCTGGGATATGAAGATTTCATAGATGATGCG
TGGAACCACAAATGTTCTTATGATGGTCAGTTGAATGGGCTTTTAGGACAATACAAAGTT
AATGGGGAGGAAGAGGTGGTTACTGGACATATATGGTCCATGCCGAAGTACAGTGCTAAG
AAGCAAGGGGAATTAAAAGAGAGGCTGAAGCACGCATATAATACGTTGAGGAAGGAGTTC
AGGAATGTTTTCGAGCAGATGGAACCTGATTTTGATATGCTTCCCGTTGATGAGAAGAAT
GATATGTATGAAAGAAAGGCATCTGCGTGGTATCGGGTCACCTACCATCCTCATTGGGTG
ACTAGATCACTAGAGTTGCAATTGCCAGATGCTGTTTCAAATGGTGTTATGTTAAGTTTT
GCTTGGATTGCAGCAGATTACATTGCTCGAATTAAAATTAGACAACGGGGAATGCAAAAT
TCTGACTCTACCAAGCCTATCAATTTCCTTGGAAGGTATCTTGTTAACAAGATATAA