Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060669
CDS Infomation

pacid=37474303 polypeptide=PGSC0003DMP400040834 locus=PGSC0003DMG400023598 ID=PGSC0003DMT400060669.v4.03 annot-version=v4.03
Sequence

ATGTCAAATTCTACATCATCTCTCTTCACTACGCCTTCTCAATTTTTAGTACAATGTAAT
AACCCATTAATTATTTCTGGAAAATTGAGCTTCAAAATTCGAGCTTCAGCAGCTTCTTCT
TCTCCTTCATCAACTGGTGTTGATTTGTCCAACCTCCAAACCGCCATTTCTAAGAAAGAT
AGTAATGCCGTAAAAGAGGCGCTTGATCAGCTAGTTGAAATCGGTTGGTCCAAAAAGTGG
GGTTCTCAACCATATGTGTCACGTCGAACGACATCTCTTAGAGAGCTGACAACTCTCGGA
ATAAAGAACGCAGAGAACCTTGCAATCCCAAGTGTCAGAAATGATGCAGCTTTTCTGTTT
ACGGTGGTAGGCACGACAGGATTTTTGGGAGTTCTTGCTGGCCAACTTCCTGGTGATTGG
GGTTTCTTCGTTCCATACTTGATTGGAAGCATATCTTTAGTAGTTTTGGGAATCGGAAGT
ACTTCCCCAGCGCTCCTTCAGGCCGCCATTGATGGATTTTCATCCTTTTTTCCTGATTAC
CAGGAGAGAATCGCCAGACATGAAGCAGCTCATTTCTTAGTTTCCTACCTAATTGGTGTT
CCGATCCTTGGATATTCACTGGATATTGGGAAAGAGCATGTCAATTTAATTGATGAAAGG
TTGGAAAAGCTTATATACAGTGGCCAGCTTGACTCAAAAGAACTCGACAGGTTGGCAGTG
GTAGCGATGGCCGGGCTAGCAGCAGAAGGGCTAAAGTATGATAAAGTTGTTGGTCAATCA
GCTGACCTTTTCACTCTTCAGAGATTTCTAAACAGGAGCAAGCCGTCGCTTAGCAAAGAT
CAGCAACAGAACCTTACAAGATGGGCGGTTCTATTTGCTGCTTCACTACTGAAAAATAAT
AGCAAGCTTCATGAAGCCCTAATAACGGCAATGACAAACAAGGCATCGGTCGTAGAATGC
ATAGAAGCAATTGAGAAGGCAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040834
PEP Infomation

pacid=37474303 transcript=PGSC0003DMT400060669 locus=PGSC0003DMG400023598 ID=PGSC0003DMT400060669.v4.03 annot-version=v4.03
Sequence

MSNSTSSLFTTPSQFLVQCNNPLIISGKLSFKIRASAASSSPSSTGVDLSNLQTAISKKD
SNAVKEALDQLVEIGWSKKWGSQPYVSRRTTSLRELTTLGIKNAENLAIPSVRNDAAFLF
TVVGTTGFLGVLAGQLPGDWGFFVPYLIGSISLVVLGIGSTSPALLQAAIDGFSSFFPDY
QERIARHEAAHFLVSYLIGVPILGYSLDIGKEHVNLIDERLEKLIYSGQLDSKELDRLAV
VAMAGLAAEGLKYDKVVGQSADLFTLQRFLNRSKPSLSKDQQQNLTRWAVLFAASLLKNN
SKLHEALITAMTNKASVVECIEAIEKAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400060669
Transcript Infomation

pacid=37474303 locus=PGSC0003DMG400023598 ID=PGSC0003DMT400060669.v4.03 annot-version=v4.03
Sequence

ATGTCAAATTCTACATCATCTCTCTTCACTACGCCTTCTCAATTTTTAGTACAATGTAAT
AACCCATTAATTATTTCTGGAAAATTGAGCTTCAAAATTCGAGCTTCAGCAGCTTCTTCT
TCTCCTTCATCAACTGGTGTTGATTTGTCCAACCTCCAAACCGCCATTTCTAAGAAAGAT
AGTAATGCCGTAAAAGAGGCGCTTGATCAGCTAGTTGAAATCGGTTGGTCCAAAAAGTGG
GGTTCTCAACCATATGTGTCACGTCGAACGACATCTCTTAGAGAGCTGACAACTCTCGGA
ATAAAGAACGCAGAGAACCTTGCAATCCCAAGTGTCAGAAATGATGCAGCTTTTCTGTTT
ACGGTGGTAGGCACGACAGGATTTTTGGGAGTTCTTGCTGGCCAACTTCCTGGTGATTGG
GGTTTCTTCGTTCCATACTTGATTGGAAGCATATCTTTAGTAGTTTTGGGAATCGGAAGT
ACTTCCCCAGCGCTCCTTCAGGCCGCCATTGATGGATTTTCATCCTTTTTTCCTGATTAC
CAGGAGAGAATCGCCAGACATGAAGCAGCTCATTTCTTAGTTTCCTACCTAATTGGTGTT
CCGATCCTTGGATATTCACTGGATATTGGGAAAGAGCATGTCAATTTAATTGATGAAAGG
TTGGAAAAGCTTATATACAGTGGCCAGCTTGACTCAAAAGAACTCGACAGGTTGGCAGTG
GTAGCGATGGCCGGGCTAGCAGCAGAAGGGCTAAAGTATGATAAAGTTGTTGGTCAATCA
GCTGACCTTTTCACTCTTCAGAGATTTCTAAACAGGAGCAAGCCGTCGCTTAGCAAAGAT
CAGCAACAGAACCTTACAAGATGGGCGGTTCTATTTGCTGCTTCACTACTGAAAAATAAT
AGCAAGCTTCATGAAGCCCTAATAACGGCAATGACAAACAAGGCATCGGTCGTAGAATGC
ATAGAAGCAATTGAGAAGGCAGCTTGA