Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060605
CDS Infomation

pacid=37473315 polypeptide=PGSC0003DMP400040797 locus=PGSC0003DMG400023574 ID=PGSC0003DMT400060605.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTAGAAGAGATGCAGCTGATGTCCAAGAAAATGGAGAAAACAAGAAACAACAT
GAAGTCAAGAAGGAACAAGACGAGAAGAAAGAGGAAGACATCAACAACAACAACAATAAA
GATGATCAGTACTCATCATCGTCATCACCAAGAGGAGTTTTAGAGACTCCCCCATTGGGT
TCGTCGGATTCAGACAATAGCAGCATTAGCAGCAGTGATGATAGGAGCAGCAATTTTGCA
TCATCACCTTCAGGGGAATTAAGTCAAGGTGTTTATTGGAAAAATATTTTTGATCAAATA
AAGAGAAGGTCAATGAGAAGATTGTCAAGTATACCATTATTAGGATATGAGATGATTTTA
CCAAAAAATATAAGAAGGATTTTGTCCAAGAATAGAAGTGCTGAAGAAGAGGCTAATGAT
CCTGATGATATTCCAAAGCCTTCTTGGAGGAATTTTAGCTACGGGGAACTTGTTGAAGCA
ACCGATAATTTCAGTCCAGACAAGTTGATCGGGCAAGGGGGACATGCAAATGTGTATAAA
GGACATTTATCTGATGGTCAACTAGTCGCGGTAAAGAAAATAACTAAGCAAGAGAAGAAC
GATGAGGACAAAGTTGATGATTTCTTATCTGAGCTAGGAATTATTGCTCACATTAACCAT
CCTAATGCTGCTAAGTTAATAGGTTATAGTTCTGATGGCGGTTTATACCTTGTTCTTCAG
TACTTACACCATGGAAGCCTCGGTTCCTTAATACATGGTTCGGAAGAGAGACTTGATTGG
GATATAAGATATAAAGTTGCTGCTGGTATTGCCGAAGGATTGCTTTATCTTCATTGTGAA
TGTCCAAAGCGCATAATCCATAGAGATATTACTGCCTCAAACATATTACTAACTGAAGAT
TATGAACCTCAGATTTCTGATTTTGGACTAGCAAAGTGGCTGCCAGAAAAATGGGTTCAT
CATGTTGTTTCTCCCATTGAAGGAACTTTTGGATATATGGCTCCAGAGTACTTTATGCAT
GGAATTGTTAATGAAAAGACGGACGTATTTGCCTTTGGAGTTCTATTATTGGAGCTTATT
ACTGGTCATCGTGCAGTTGATTCATATAGAAAGAGCCTTGTGTTGTGGGCAAAACCTTTG
TTGCAAAAGAACAACATCAAGGAAATAGCAGATCCTCGTTTAGGTGATGATTACGATGTT
GTTGAGATGAAACGCGCCATGTTTACAGCTTTATGCTGCCTTCACCACTTGCCTGACATT
CGTCCGAACATGAAAAAGGTTGTTCAGCTATTGAGAGGCGAGAACGCACCAGTAGAAATG
AAGCAGAAGTCAATGGGAGGGAGAGCATTGATGCTTTCAGATGAATATACAAGCACACAT
TATCTCCAGGATCTCAACCGCCATATGGAGCTTGTTATGGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040797
PEP Infomation

pacid=37473315 transcript=PGSC0003DMT400060605 locus=PGSC0003DMG400023574 ID=PGSC0003DMT400060605.v4.03 annot-version=v4.03
Sequence

MEGRRDAADVQENGENKKQHEVKKEQDEKKEEDINNNNNKDDQYSSSSSPRGVLETPPLG
SSDSDNSSISSSDDRSSNFASSPSGELSQGVYWKNIFDQIKRRSMRRLSSIPLLGYEMIL
PKNIRRILSKNRSAEEEANDPDDIPKPSWRNFSYGELVEATDNFSPDKLIGQGGHANVYK
GHLSDGQLVAVKKITKQEKNDEDKVDDFLSELGIIAHINHPNAAKLIGYSSDGGLYLVLQ
YLHHGSLGSLIHGSEERLDWDIRYKVAAGIAEGLLYLHCECPKRIIHRDITASNILLTED
YEPQISDFGLAKWLPEKWVHHVVSPIEGTFGYMAPEYFMHGIVNEKTDVFAFGVLLLELI
TGHRAVDSYRKSLVLWAKPLLQKNNIKEIADPRLGDDYDVVEMKRAMFTALCCLHHLPDI
RPNMKKVVQLLRGENAPVEMKQKSMGGRALMLSDEYTSTHYLQDLNRHMELVME*

Transcript Sequence

Transcript ID

PGSC0003DMT400060605
Transcript Infomation

pacid=37473315 locus=PGSC0003DMG400023574 ID=PGSC0003DMT400060605.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTAGAAGAGATGCAGCTGATGTCCAAGAAAATGGAGAAAACAAGAAACAACAT
GAAGTCAAGAAGGAACAAGACGAGAAGAAAGAGGAAGACATCAACAACAACAACAATAAA
GATGATCAGTACTCATCATCGTCATCACCAAGAGGAGTTTTAGAGACTCCCCCATTGGGT
TCGTCGGATTCAGACAATAGCAGCATTAGCAGCAGTGATGATAGGAGCAGCAATTTTGCA
TCATCACCTTCAGGGGAATTAAGTCAAGGTGTTTATTGGAAAAATATTTTTGATCAAATA
AAGAGAAGGTCAATGAGAAGATTGTCAAGTATACCATTATTAGGATATGAGATGATTTTA
CCAAAAAATATAAGAAGGATTTTGTCCAAGAATAGAAGTGCTGAAGAAGAGGCTAATGAT
CCTGATGATATTCCAAAGCCTTCTTGGAGGAATTTTAGCTACGGGGAACTTGTTGAAGCA
ACCGATAATTTCAGTCCAGACAAGTTGATCGGGCAAGGGGGACATGCAAATGTGTATAAA
GGACATTTATCTGATGGTCAACTAGTCGCGGTAAAGAAAATAACTAAGCAAGAGAAGAAC
GATGAGGACAAAGTTGATGATTTCTTATCTGAGCTAGGAATTATTGCTCACATTAACCAT
CCTAATGCTGCTAAGTTAATAGGTTATAGTTCTGATGGCGGTTTATACCTTGTTCTTCAG
TACTTACACCATGGAAGCCTCGGTTCCTTAATACATGGTTCGGAAGAGAGACTTGATTGG
GATATAAGATATAAAGTTGCTGCTGGTATTGCCGAAGGATTGCTTTATCTTCATTGTGAA
TGTCCAAAGCGCATAATCCATAGAGATATTACTGCCTCAAACATATTACTAACTGAAGAT
TATGAACCTCAGATTTCTGATTTTGGACTAGCAAAGTGGCTGCCAGAAAAATGGGTTCAT
CATGTTGTTTCTCCCATTGAAGGAACTTTTGGATATATGGCTCCAGAGTACTTTATGCAT
GGAATTGTTAATGAAAAGACGGACGTATTTGCCTTTGGAGTTCTATTATTGGAGCTTATT
ACTGGTCATCGTGCAGTTGATTCATATAGAAAGAGCCTTGTGTTGTGGGCAAAACCTTTG
TTGCAAAAGAACAACATCAAGGAAATAGCAGATCCTCGTTTAGGTGATGATTACGATGTT
GTTGAGATGAAACGCGCCATGTTTACAGCTTTATGCTGCCTTCACCACTTGCCTGACATT
CGTCCGAACATGAAAAAGGTTGTTCAGCTATTGAGAGGCGAGAACGCACCAGTAGAAATG
AAGCAGAAGTCAATGGGAGGGAGAGCATTGATGCTTTCAGATGAATATACAAGCACACAT
TATCTCCAGGATCTCAACCGCCATATGGAGCTTGTTATGGAGTAA