Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060506
CDS Infomation

pacid=37443943 polypeptide=PGSC0003DMP400040747 locus=PGSC0003DMG400023534 ID=PGSC0003DMT400060506.v4.03 annot-version=v4.03
Sequence

ATGAATCTTGGTGTTGGGTCAGTGGTGAAAACCATGTCTGGTGCTAGTTGTAGTGTTTCT
TGGAAATCCGGTGGTAGTGATAAAGTTTCCGACCAGTTTCCGGCAGGTTTAAGAGTGCTT
GTTGTAGATGATGATCCTACTTGTTTAATGATCTTGGAGAAGATGCTTAGGAATTGTCAC
TATGAAGTCACCAAGTCTAATCGAGCGGAGCATGCATTATCAATGCTCCGGGAAAACAGA
AATGGATTTGACATTGTTATTAGTGATGTGCACATGCCAGACATGGATGGTTTCAAACTT
CTTGAGCATGTTGGTCTGGAAATGGACCTCCCTGTTATAATGATGTCTGCGGATGACAGT
AAGGATGTTGTTATGAAAGGTGTTACTCATGGAGCATGCGATTATCTGATCAAACCGGTG
CGTATTGAGGCTTTGAAGAACATTTGGCAGCATGTGATTCGTAAAAAGAAGCACGAGTTG
AAGGACAAAGATTTTGATCAATCAACAAGCGTGGAAGATGGAGATCAACAGCAGAAACCT
CCAGAAGATGTTGATTATTCATCTTCAGCTAATGAAGGGAACTGGAAAAGCTCAAAGAGA
AGAAAGGAGGAGGAAGATGAAACTGAAGAAAGGGATGATTTATCTACATCAAAGAAGCCA
CGCGTGGTTTGGTCGGTGGAGCTTCATCAACAGTTTGTACAAGCTGTCAACCAACTTGGA
ATTGACAAGGCTGTTCCCAAGAAAATTCTTGAGCTGATGAATGTTCCTGGGCTAACCAGA
GAAAATGTTGCTAGCCACCTACAGAAATATCGGCTGTACCTAAGGAGGTTGAGTGGTGTA
TCACAGCATCAGAATGGACTGAATAACTCATTCATGGGACACCCGGAAGCAACATATGGG
ACGATGACTTCTTTCAATGGGCTAGAGCTTCAAGCTTTAGCTGCCACCGGTCAACTACCC
GCACAAAGTCTTGCTACCCTCCAGGCGGCTGCACTAGGTAGGTCTGCGACAAAATCTGCA
ATATCTATGCCTCTAGTAGATCAAAGAAACCTTTTCAGCTTTGAAAATCCCAAGTTGAGA
TTTTCCGAGGGACAACAACAATTAAATAATAGCAATAAACAAATTAACTTGCTTCATGGG
ATCCCAACAACCATGGAACCGAAGCAGCTGGCTGATTTGCACCAGTCCTCACAGTCCTTT
GTGGCTATGAATATGCAAGGGAATGCTAGAATGCAACAAAACAACGCTCTACTAATGCAT
ATGTCTCAACAACAACAACAATCATCTAGGGCTCAAATGCTAAATGAAACCAATAATGGT
CAAGTTTCACGGCCGCCATTGTCCATGTCACAACCTGCTGCAGTCTTATCACGAAATAGC
ATTGTTGACAACGTACGAGGGCCAATATACAATCCAGTCTCCCAAACATCTTCAATGGTA
GATTTTTCGCTGAATCAAACTACAGAGTTGCAAAACAACAGTTTTCCTCTTGTGAGTAGT
AATTCAGGAATGTCAACTCTGACATCTAAAAGATTGCTTCAGGAAGAAGTTAACTCTGAT
ATTAAAGGATCTAGAGGATTCCCTCCTGGTTACGATATATTTGAAGAGTTGCATCAGCAA
AAAACGCAGGATTGGGGTTTACCGAATATCGGATCAAACTTCAGTGCGTCTGATCATTCA
AGTATACCAGGAACTCTAGATGTCTCACCGTCCATGTTAGTTCAACAAGGTATTTCTTCA
ATGAAGAAGAATGGACAAAATGGAAATTATCCTATGGGTGGACCGCAACTTAACCTATTT
TCTGGCGGAAATTTGCTTCCTGTTAAAGCTGAACAACTTCCTGATACGAGCTATCAAAAT
ACATTTTTTCCGGAGCAATTTGGACAGGATGATCTCATGAGTGCCCTTCTGAAGCAGCAA
GAAAGTGTCGGACAAGTTGAAACTGAATTTGGCTTTGATGGATATTCACCATTGGACAAT
CTTCCTGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040747
PEP Infomation

pacid=37443943 transcript=PGSC0003DMT400060506 locus=PGSC0003DMG400023534 ID=PGSC0003DMT400060506.v4.03 annot-version=v4.03
Sequence

MNLGVGSVVKTMSGASCSVSWKSGGSDKVSDQFPAGLRVLVVDDDPTCLMILEKMLRNCH
YEVTKSNRAEHALSMLRENRNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDS
KDVVMKGVTHGACDYLIKPVRIEALKNIWQHVIRKKKHELKDKDFDQSTSVEDGDQQQKP
PEDVDYSSSANEGNWKSSKRRKEEEDETEERDDLSTSKKPRVVWSVELHQQFVQAVNQLG
IDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGHPEATYG
TMTSFNGLELQALAATGQLPAQSLATLQAAALGRSATKSAISMPLVDQRNLFSFENPKLR
FSEGQQQLNNSNKQINLLHGIPTTMEPKQLADLHQSSQSFVAMNMQGNARMQQNNALLMH
MSQQQQQSSRAQMLNETNNGQVSRPPLSMSQPAAVLSRNSIVDNVRGPIYNPVSQTSSMV
DFSLNQTTELQNNSFPLVSSNSGMSTLTSKRLLQEEVNSDIKGSRGFPPGYDIFEELHQQ
KTQDWGLPNIGSNFSASDHSSIPGTLDVSPSMLVQQGISSMKKNGQNGNYPMGGPQLNLF
SGGNLLPVKAEQLPDTSYQNTFFPEQFGQDDLMSALLKQQESVGQVETEFGFDGYSPLDN
LPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400060506
Transcript Infomation

pacid=37443943 locus=PGSC0003DMG400023534 ID=PGSC0003DMT400060506.v4.03 annot-version=v4.03
Sequence

ATGAATCTTGGTGTTGGGTCAGTGGTGAAAACCATGTCTGGTGCTAGTTGTAGTGTTTCT
TGGAAATCCGGTGGTAGTGATAAAGTTTCCGACCAGTTTCCGGCAGGTTTAAGAGTGCTT
GTTGTAGATGATGATCCTACTTGTTTAATGATCTTGGAGAAGATGCTTAGGAATTGTCAC
TATGAAGTCACCAAGTCTAATCGAGCGGAGCATGCATTATCAATGCTCCGGGAAAACAGA
AATGGATTTGACATTGTTATTAGTGATGTGCACATGCCAGACATGGATGGTTTCAAACTT
CTTGAGCATGTTGGTCTGGAAATGGACCTCCCTGTTATAATGATGTCTGCGGATGACAGT
AAGGATGTTGTTATGAAAGGTGTTACTCATGGAGCATGCGATTATCTGATCAAACCGGTG
CGTATTGAGGCTTTGAAGAACATTTGGCAGCATGTGATTCGTAAAAAGAAGCACGAGTTG
AAGGACAAAGATTTTGATCAATCAACAAGCGTGGAAGATGGAGATCAACAGCAGAAACCT
CCAGAAGATGTTGATTATTCATCTTCAGCTAATGAAGGGAACTGGAAAAGCTCAAAGAGA
AGAAAGGAGGAGGAAGATGAAACTGAAGAAAGGGATGATTTATCTACATCAAAGAAGCCA
CGCGTGGTTTGGTCGGTGGAGCTTCATCAACAGTTTGTACAAGCTGTCAACCAACTTGGA
ATTGACAAGGCTGTTCCCAAGAAAATTCTTGAGCTGATGAATGTTCCTGGGCTAACCAGA
GAAAATGTTGCTAGCCACCTACAGAAATATCGGCTGTACCTAAGGAGGTTGAGTGGTGTA
TCACAGCATCAGAATGGACTGAATAACTCATTCATGGGACACCCGGAAGCAACATATGGG
ACGATGACTTCTTTCAATGGGCTAGAGCTTCAAGCTTTAGCTGCCACCGGTCAACTACCC
GCACAAAGTCTTGCTACCCTCCAGGCGGCTGCACTAGGTAGGTCTGCGACAAAATCTGCA
ATATCTATGCCTCTAGTAGATCAAAGAAACCTTTTCAGCTTTGAAAATCCCAAGTTGAGA
TTTTCCGAGGGACAACAACAATTAAATAATAGCAATAAACAAATTAACTTGCTTCATGGG
ATCCCAACAACCATGGAACCGAAGCAGCTGGCTGATTTGCACCAGTCCTCACAGTCCTTT
GTGGCTATGAATATGCAAGGGAATGCTAGAATGCAACAAAACAACGCTCTACTAATGCAT
ATGTCTCAACAACAACAACAATCATCTAGGGCTCAAATGCTAAATGAAACCAATAATGGT
CAAGTTTCACGGCCGCCATTGTCCATGTCACAACCTGCTGCAGTCTTATCACGAAATAGC
ATTGTTGACAACGTACGAGGGCCAATATACAATCCAGTCTCCCAAACATCTTCAATGGTA
GATTTTTCGCTGAATCAAACTACAGAGTTGCAAAACAACAGTTTTCCTCTTGTGAGTAGT
AATTCAGGAATGTCAACTCTGACATCTAAAAGATTGCTTCAGGAAGAAGTTAACTCTGAT
ATTAAAGGATCTAGAGGATTCCCTCCTGGTTACGATATATTTGAAGAGTTGCATCAGCAA
AAAACGCAGGATTGGGGTTTACCGAATATCGGATCAAACTTCAGTGCGTCTGATCATTCA
AGTATACCAGGAACTCTAGATGTCTCACCGTCCATGTTAGTTCAACAAGGTATTTCTTCA
ATGAAGAAGAATGGACAAAATGGAAATTATCCTATGGGTGGACCGCAACTTAACCTATTT
TCTGGCGGAAATTTGCTTCCTGTTAAAGCTGAACAACTTCCTGATACGAGCTATCAAAAT
ACATTTTTTCCGGAGCAATTTGGACAGGATGATCTCATGAGTGCCCTTCTGAAGCAGCAA
GAAAGTGTCGGACAAGTTGAAACTGAATTTGGCTTTGATGGATATTCACCATTGGACAAT
CTTCCTGTGTAA