Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060475
CDS Infomation

pacid=37442239 polypeptide=PGSC0003DMP400040723 locus=PGSC0003DMG400023525 ID=PGSC0003DMT400060475.v4.03 annot-version=v4.03
Sequence

ATGGGTGACTTACCATGTCCACCATATTCTAACAAAAGATTGGAGGCACGGATGATTAGC
AAGGAAAAGCTACCGAAGATTTGTTTAGTTGCTTCTGCTACAAAGCACTTCTCAGCAAAG
ACTTTGAAATGTATAGGTAAAGTGAAACACAGTGTACAGACTAGTGGAGCTGCTGGTGAT
GTTGTCATATTCTTGGCTACCACTGCTGTTCTAGAGGTTGTACGAAGGCTGAGCAAAGCT
AGATGTCCTTTTATTTGGCACGGTTTGCAGGCGCTGCAAGCTTTATGTTATCCACCGCTT
AAGTGGATCCAAAAGTGGGTTCCTTTGGAGCCATTGGTCAGACAATTGCAGAAATTGTCT
AGGCCAATGCTATTGCTCTCAATTGCAACAGTTTTCTCCGATCAGTCATCATCTACGGGA
GAAACGACACCGAACGACTTTCATCATTCTCAAGCATATCCACAAGCAAGATCTCATGAT
GAAGTACAGGATGATGGTTATCCTCAAAGATGGTTGCTAGAACTCCATAAGGAACTGAGG
GAGGAGGGTATTAGTGTACCTGAGAGGTTGAATGATGATGAGCTCCGTCAATTCTATGCT
GCTGCAAATGGTGATTTTGCTAGGCTGCTTTCATCAGTTAAGAAAACCATTAAATGGCGG
CAGAGTTACACGTTTCTTTCACCAGAAGAACTTAAGGCTTGGTCTCCTTTCATTTTTTGG
CACGGCCACGATGCCAATCAACGGCCTTGCCTCATCATTCGCCTTGGACTTGCTTGCTCC
AACCTGAGATCGAATGGCAAATCTCTCTTGATAAAAGCAGTTGTTTCGCAGATTGAGCAC
TGTATTCTGAGAATGGTCAATGTGGAACATCCTCAAATAACTGTTTTGATGGACTGTGAA
GGACTCTCTCCCTTTGGTTTTCCCATACACATGATGAGATCTTGTGCTATGCTCTTGCAG
GATCATTATCCTAATCGTCTTAGCTCTTTGATTATAGTTCGGCTCCCTCAAGTTGCCCAA
ATAATAATGCAAACTTTCTTTCAGGTGCTAAAACCAGCCACACGCCAAAAAGTGAGGATT
ATTGGGAGAAACCATCTAGAGTTTCTATCCAATCACCTCGATTCAACCCCTCCGTTTCTT
GGTGGAAACTGCTCATGTTCAAAATGCTCAGACCAGACCAATGCAGAAGGTGAATCCGAT
GAAGCTACAAGGACAGAACCAACACCTGATCAAACGAGCAGACCTGAAACAGATGATCAT
GTGAATGAATCCGATGAGGTCACTCTAACAGAACCAGCCCCTGATCAAGTGAAAGATAGC
ACTGAGCTTAATCATCACGTCTCCAACACGAGTGTCTGCAGAGAAGAACTGATAAAGACC
ATCATCATCGGTATACTGATGGTGTGGGTATTCATTGCTGTGTTTGTGGCTATGGATTAT
CCAGAAAGATGGCCTCTTTTGCGTTCGACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040723
PEP Infomation

pacid=37442239 transcript=PGSC0003DMT400060475 locus=PGSC0003DMG400023525 ID=PGSC0003DMT400060475.v4.03 annot-version=v4.03
Sequence

MGDLPCPPYSNKRLEARMISKEKLPKICLVASATKHFSAKTLKCIGKVKHSVQTSGAAGD
VVIFLATTAVLEVVRRLSKARCPFIWHGLQALQALCYPPLKWIQKWVPLEPLVRQLQKLS
RPMLLLSIATVFSDQSSSTGETTPNDFHHSQAYPQARSHDEVQDDGYPQRWLLELHKELR
EEGISVPERLNDDELRQFYAAANGDFARLLSSVKKTIKWRQSYTFLSPEELKAWSPFIFW
HGHDANQRPCLIIRLGLACSNLRSNGKSLLIKAVVSQIEHCILRMVNVEHPQITVLMDCE
GLSPFGFPIHMMRSCAMLLQDHYPNRLSSLIIVRLPQVAQIIMQTFFQVLKPATRQKVRI
IGRNHLEFLSNHLDSTPPFLGGNCSCSKCSDQTNAEGESDEATRTEPTPDQTSRPETDDH
VNESDEVTLTEPAPDQVKDSTELNHHVSNTSVCREELIKTIIIGILMVWVFIAVFVAMDY
PERWPLLRST*

Transcript Sequence

Transcript ID

PGSC0003DMT400060475
Transcript Infomation

pacid=37442239 locus=PGSC0003DMG400023525 ID=PGSC0003DMT400060475.v4.03 annot-version=v4.03
Sequence

ATGGGTGACTTACCATGTCCACCATATTCTAACAAAAGATTGGAGGCACGGATGATTAGC
AAGGAAAAGCTACCGAAGATTTGTTTAGTTGCTTCTGCTACAAAGCACTTCTCAGCAAAG
ACTTTGAAATGTATAGGTAAAGTGAAACACAGTGTACAGACTAGTGGAGCTGCTGGTGAT
GTTGTCATATTCTTGGCTACCACTGCTGTTCTAGAGGTTGTACGAAGGCTGAGCAAAGCT
AGATGTCCTTTTATTTGGCACGGTTTGCAGGCGCTGCAAGCTTTATGTTATCCACCGCTT
AAGTGGATCCAAAAGTGGGTTCCTTTGGAGCCATTGGTCAGACAATTGCAGAAATTGTCT
AGGCCAATGCTATTGCTCTCAATTGCAACAGTTTTCTCCGATCAGTCATCATCTACGGGA
GAAACGACACCGAACGACTTTCATCATTCTCAAGCATATCCACAAGCAAGATCTCATGAT
GAAGTACAGGATGATGGTTATCCTCAAAGATGGTTGCTAGAACTCCATAAGGAACTGAGG
GAGGAGGGTATTAGTGTACCTGAGAGGTTGAATGATGATGAGCTCCGTCAATTCTATGCT
GCTGCAAATGGTGATTTTGCTAGGCTGCTTTCATCAGTTAAGAAAACCATTAAATGGCGG
CAGAGTTACACGTTTCTTTCACCAGAAGAACTTAAGGCTTGGTCTCCTTTCATTTTTTGG
CACGGCCACGATGCCAATCAACGGCCTTGCCTCATCATTCGCCTTGGACTTGCTTGCTCC
AACCTGAGATCGAATGGCAAATCTCTCTTGATAAAAGCAGTTGTTTCGCAGATTGAGCAC
TGTATTCTGAGAATGGTCAATGTGGAACATCCTCAAATAACTGTTTTGATGGACTGTGAA
GGACTCTCTCCCTTTGGTTTTCCCATACACATGATGAGATCTTGTGCTATGCTCTTGCAG
GATCATTATCCTAATCGTCTTAGCTCTTTGATTATAGTTCGGCTCCCTCAAGTTGCCCAA
ATAATAATGCAAACTTTCTTTCAGGTGCTAAAACCAGCCACACGCCAAAAAGTGAGGATT
ATTGGGAGAAACCATCTAGAGTTTCTATCCAATCACCTCGATTCAACCCCTCCGTTTCTT
GGTGGAAACTGCTCATGTTCAAAATGCTCAGACCAGACCAATGCAGAAGGTGAATCCGAT
GAAGCTACAAGGACAGAACCAACACCTGATCAAACGAGCAGACCTGAAACAGATGATCAT
GTGAATGAATCCGATGAGGTCACTCTAACAGAACCAGCCCCTGATCAAGTGAAAGATAGC
ACTGAGCTTAATCATCACGTCTCCAACACGAGTGTCTGCAGAGAAGAACTGATAAAGACC
ATCATCATCGGTATACTGATGGTGTGGGTATTCATTGCTGTGTTTGTGGCTATGGATTAT
CCAGAAAGATGGCCTCTTTTGCGTTCGACTTAG