Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060452
CDS Infomation

pacid=37443346 polypeptide=PGSC0003DMP400040702 locus=PGSC0003DMG400023513 ID=PGSC0003DMT400060452.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGAAGCAGCACACACCAAGTGTTATAGCAAGGCTGATGAGCCTTGATGAGCTT
CCACCTCGGCAGCACCTCCCTGTTAAGAGAAGGAGAGTACTCTCTGAGAACTATCTCCAG
AAAATGGCTTCTATAGGTTTGCGAGAGAAGAGTTCATTTTCTGTTGGCTTCTCCCGTGGA
ATAAATACTCAGAAGTGTCAAGTAGTTAAAGATGTATCTGCAGCCAAGTTGAAGATGCGG
AAATATACTAATTCGAGTGTTACTTTAATAAAGGAGAAACATTCTAATCTTATGGACTCC
GAAGGCATCTCAGAAAGTTTACTTTCAACCAAGCATTTGCGTGATCTACAGGCTTATAAA
CCCTATTGCCATCCGGTTCACTCAGCTGTCGCTAAGACACTATGCAAGATGTCTGCTAGG
ACTACCGCTAAAGAAAAGACTTCGAAATCTCTTCAGACACTTGAGATTGGTACACCTAAG
GATGATGTTGGAGACTGTTCTATTCATCACTTGAAGAAAATAAACTTTCAGCTTGATCCA
AATGAAAACATGCCTCATCCGTCTACAAGAGTTATTGTGGTCAAACCTAGTTCTGGAAAG
TATCATAAAACCAAACATCAGTCTGTTTCTCGTAGGCATGGCTTGGAGTCCGATCCCGTT
GATTTGAAGTACAAGAAATTCACAGAACATGAAAATGGGGCAGTACATAATAAGAGACCA
GGAAGAGCAGAAAGCATCAGTGACACTTTTCTGAAGGCCGAGGCTCTAAAGCTGCCTTCT
TCAAAATTATTTAGTAAACAAAGAAAAGATAATACACTAAATTTCTTTTCAAAGAGGTCA
TCTTTTTCCAAAGAAGTTAAGAAGCAAACCATTGAAAAGTGGAAGCTGATGAATGATCTT
TCAGAAGTTGAAACAACTTCTAGAAGCCAAAATCTTGGAGAAATGCTTGCTACAGATGAC
TTAGAAACTAAGCCTCAATTTTTGGACTCCAAGCGTGACTCACAAAGTTTTTGCAGTTCA
TTCAGTGTGAACACTCAGATCTCAGGCTCATGCAGCAAGGATTCGTTAATTCCAAATCAT
TCTGCTGGTTCTATGATAGCCTCTGGAAGTCCTGAAGGTATGATTGGCCATAAAGCTTCT
CTATATGGCTGGCATCTGAGGCAGAAAGTAGCTGTTACTGAGAAACATTCCAAGTCTATG
AACCAAAAACAGAAAGATAATATGGAATATAGAGACTTGAACTTGAAGGAAACCGATCAG
CGCAGTCCAAATTCAGTTCTGGAGCCACCGTTCCAGGAAGAGAAACCCTGTACCTCTGCA
TTCCACGGCTTATGTAGTGTAGCACGGCAACTTCAGCTTCTTGAGACCAACTCTGAGGAA
ACATATTCAGAAGGATCTGAAATGGGTGTCTCAACTGATGGAGACTCCGAGACAGGGTCT
CTGGATCTCCTTCAAGATAGTGAAAACATATTGAAAGACTTCAAAACCGCAGATGGCAGG
GACTTCTCCTATCTGGTTGATGTTTTAGATGAAGCCAGCTTGCACGGCATGAACCTAGGA
ATGTGTTTTGAGACATGGCATTCTTTGGAATGTCCCGTGAATCCCTCAGTGTTTGACTTG
TTAGAGAAGAAATACGGGAAACAAATATCTTGGCTACAATCAGAGAGGAAACTTCTGTTT
GACCACATAAATTCAGGGCTAAGTGAAATTTTGCATTCATTTCTGGAGATCTACATAATA
GAAAAATCTTTAAAAAGAAGGTGCTGTTCTACTATGAGGAGAACTGATATTGAAGAAGAG
TTGTGGAGGATGCTGGTTAGTCATGAAAATGAAATACGCAAGGACTTGTCTGGGAAGGCA
ATTGGAAATGAGACCAAATGGTTGCAGGTCGAGGAGGAAATTGGTAGCATATGCAGAGAA
ATAGAGAAATATTTGTTGGATGAGCTAGTTGCAGAATTAGCTTTGCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040702
PEP Infomation

pacid=37443346 transcript=PGSC0003DMT400060452 locus=PGSC0003DMG400023513 ID=PGSC0003DMT400060452.v4.03 annot-version=v4.03
Sequence

MERKQHTPSVIARLMSLDELPPRQHLPVKRRRVLSENYLQKMASIGLREKSSFSVGFSRG
INTQKCQVVKDVSAAKLKMRKYTNSSVTLIKEKHSNLMDSEGISESLLSTKHLRDLQAYK
PYCHPVHSAVAKTLCKMSARTTAKEKTSKSLQTLEIGTPKDDVGDCSIHHLKKINFQLDP
NENMPHPSTRVIVVKPSSGKYHKTKHQSVSRRHGLESDPVDLKYKKFTEHENGAVHNKRP
GRAESISDTFLKAEALKLPSSKLFSKQRKDNTLNFFSKRSSFSKEVKKQTIEKWKLMNDL
SEVETTSRSQNLGEMLATDDLETKPQFLDSKRDSQSFCSSFSVNTQISGSCSKDSLIPNH
SAGSMIASGSPEGMIGHKASLYGWHLRQKVAVTEKHSKSMNQKQKDNMEYRDLNLKETDQ
RSPNSVLEPPFQEEKPCTSAFHGLCSVARQLQLLETNSEETYSEGSEMGVSTDGDSETGS
LDLLQDSENILKDFKTADGRDFSYLVDVLDEASLHGMNLGMCFETWHSLECPVNPSVFDL
LEKKYGKQISWLQSERKLLFDHINSGLSEILHSFLEIYIIEKSLKRRCCSTMRRTDIEEE
LWRMLVSHENEIRKDLSGKAIGNETKWLQVEEEIGSICREIEKYLLDELVAELALH*

Transcript Sequence

Transcript ID

PGSC0003DMT400060452
Transcript Infomation

pacid=37443346 locus=PGSC0003DMG400023513 ID=PGSC0003DMT400060452.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGAAGCAGCACACACCAAGTGTTATAGCAAGGCTGATGAGCCTTGATGAGCTT
CCACCTCGGCAGCACCTCCCTGTTAAGAGAAGGAGAGTACTCTCTGAGAACTATCTCCAG
AAAATGGCTTCTATAGGTTTGCGAGAGAAGAGTTCATTTTCTGTTGGCTTCTCCCGTGGA
ATAAATACTCAGAAGTGTCAAGTAGTTAAAGATGTATCTGCAGCCAAGTTGAAGATGCGG
AAATATACTAATTCGAGTGTTACTTTAATAAAGGAGAAACATTCTAATCTTATGGACTCC
GAAGGCATCTCAGAAAGTTTACTTTCAACCAAGCATTTGCGTGATCTACAGGCTTATAAA
CCCTATTGCCATCCGGTTCACTCAGCTGTCGCTAAGACACTATGCAAGATGTCTGCTAGG
ACTACCGCTAAAGAAAAGACTTCGAAATCTCTTCAGACACTTGAGATTGGTACACCTAAG
GATGATGTTGGAGACTGTTCTATTCATCACTTGAAGAAAATAAACTTTCAGCTTGATCCA
AATGAAAACATGCCTCATCCGTCTACAAGAGTTATTGTGGTCAAACCTAGTTCTGGAAAG
TATCATAAAACCAAACATCAGTCTGTTTCTCGTAGGCATGGCTTGGAGTCCGATCCCGTT
GATTTGAAGTACAAGAAATTCACAGAACATGAAAATGGGGCAGTACATAATAAGAGACCA
GGAAGAGCAGAAAGCATCAGTGACACTTTTCTGAAGGCCGAGGCTCTAAAGCTGCCTTCT
TCAAAATTATTTAGTAAACAAAGAAAAGATAATACACTAAATTTCTTTTCAAAGAGGTCA
TCTTTTTCCAAAGAAGTTAAGAAGCAAACCATTGAAAAGTGGAAGCTGATGAATGATCTT
TCAGAAGTTGAAACAACTTCTAGAAGCCAAAATCTTGGAGAAATGCTTGCTACAGATGAC
TTAGAAACTAAGCCTCAATTTTTGGACTCCAAGCGTGACTCACAAAGTTTTTGCAGTTCA
TTCAGTGTGAACACTCAGATCTCAGGCTCATGCAGCAAGGATTCGTTAATTCCAAATCAT
TCTGCTGGTTCTATGATAGCCTCTGGAAGTCCTGAAGGTATGATTGGCCATAAAGCTTCT
CTATATGGCTGGCATCTGAGGCAGAAAGTAGCTGTTACTGAGAAACATTCCAAGTCTATG
AACCAAAAACAGAAAGATAATATGGAATATAGAGACTTGAACTTGAAGGAAACCGATCAG
CGCAGTCCAAATTCAGTTCTGGAGCCACCGTTCCAGGAAGAGAAACCCTGTACCTCTGCA
TTCCACGGCTTATGTAGTGTAGCACGGCAACTTCAGCTTCTTGAGACCAACTCTGAGGAA
ACATATTCAGAAGGATCTGAAATGGGTGTCTCAACTGATGGAGACTCCGAGACAGGGTCT
CTGGATCTCCTTCAAGATAGTGAAAACATATTGAAAGACTTCAAAACCGCAGATGGCAGG
GACTTCTCCTATCTGGTTGATGTTTTAGATGAAGCCAGCTTGCACGGCATGAACCTAGGA
ATGTGTTTTGAGACATGGCATTCTTTGGAATGTCCCGTGAATCCCTCAGTGTTTGACTTG
TTAGAGAAGAAATACGGGAAACAAATATCTTGGCTACAATCAGAGAGGAAACTTCTGTTT
GACCACATAAATTCAGGGCTAAGTGAAATTTTGCATTCATTTCTGGAGATCTACATAATA
GAAAAATCTTTAAAAAGAAGGTGCTGTTCTACTATGAGGAGAACTGATATTGAAGAAGAG
TTGTGGAGGATGCTGGTTAGTCATGAAAATGAAATACGCAAGGACTTGTCTGGGAAGGCA
ATTGGAAATGAGACCAAATGGTTGCAGGTCGAGGAGGAAATTGGTAGCATATGCAGAGAA
ATAGAGAAATATTTGTTGGATGAGCTAGTTGCAGAATTAGCTTTGCATTGA