Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060448
CDS Infomation

pacid=37442213 polypeptide=PGSC0003DMP400040698 locus=PGSC0003DMG400023511 ID=PGSC0003DMT400060448.v4.03 annot-version=v4.03
Sequence

ATGGCGATTCTTGACATGTCTAAGAGAGAACCATCATCACCATCGACACCACAGAGAGCC
AAGAAGAGCCTATTCTCTTTCGTGAAAACCACTTCATCCCTCTCTTCCTTTTCTAGTCAT
ATACCTCCTCAGAAACCTTCGTTGACATTCTCTCGATCTATCATGGAAGAGAATATTGAT
AACGCGGACACTATTATCAAAAAATGGGATCATAAAGAATCGTCTAACGAAAAATTCACT
TCACTCTTTCAAGAAGACAGAAAAGAAGCCAAAGAATACATTCAATGTGTCAAAGACTTG
AAAAAAGCTATGCATTTTTTTGTTACACAACATTCAACTTGTAACAAACTTGTACTTGCA
CAAAACTTGATGCAAAAGGCTATGAAAAGACTAGAAAATGAATTTTACCAAATTTTGTCA
ACAAAAAAGGAGCATTTGGATCCTGAATCAGTATCCAAGTCTAGTCAATCCTCACACATA
TCGAGGTCGATTTCAGTTGATTCTTCTGAATCAACTGACCTCGGAAATGAGATTCAGCAC
ACTACTAGTGCTGAATCCATTTCCGAGGCTGAACATCTTTCACTTCTAACAATGTCTGAT
CTCAAAATGATCGCGGATTGTATGATTGACTCTGGCTATGCAAAAGAGTGTTGGAAGATC
TACAGGATCATCAGGAAATCTATCGTCGATGAAGGACTCTATCGTCTTGGAATTGAATCG
CGTAGCTCAGCTTATGTTAACGCGATGAAACCAAATGTTCTCGAACATCAAGTCAAGCAT
TGGATTGATTCAACTAAAATCGCGGTGAAAACACTCTTCTATGGAGAGAGGTTTCTTTGT
GATCATGTTTTTTCAACCTCGAAAACGATCAATGAAACATGTTTTAGTGATATAGCCAAA
GAAGGAGGAATCGTTTTGCTTAAATTTCCTGAGGTCGTTGCAAAGACGAAGAAATCACAT
GAAAAGATTTTTCTTTTAATGGATTTACACGAAACAATAGCTGAACTATTGCCAGAGATC
GAATCAATCTTCTCGTTTGATTCGATCTCATCTGTCAAAGTTCAAGCTGTTTCGTCATTA
AATAAACTTAAGATCTCTGTTCTAAATATCATCTCTGATTTCGAGCTGTCAATACAGAGG
AATTCCTTGAAAACACCAGTTCCTGGTGGGGGAATTCATCCGTTAACCAACTCTGTTGCG
GAATACTTAGCTTCGTTAGCAAGCTACAATGGAGTCCTCTCATATATCATTTCTGACTCT
ACATCAACAACGGAATTTTCTGAAACTTATTTCGACAGTGCATTGATAAGTGAAACGCCC
AAAAATTCATCAGTCTGTGCTAAATTGGCTTGGATTGTACTCGTCCTGCTTTGCAAACTC
GATTGCAAAGCAGAGTTGTACAATAACATCGCGTTATCCTATCTCTTCTTAGCTAACAAT
ATCCAATTCATTATCGAGAGGGTACGTGGAAGTGCCCTCAGGATCATATTGGGAGACGAA
TGGATATTGAACTTGGAGAGAAAGGTAAAGTTGTATTCAACAAAATACGAAAATGTAGCT
TGGAATAAGGTGTTTATGTGTTTGCCTCAGAGTTTAGATCCCTCGATTTCCTCTGATATG
ATTAAGGAACACTTCAAACGATTCAATGAATCGTTTGAAGAAACGTATCAGAGACAGAAA
TCTTGGGTTGTACCTGATAGGACTCTACGAGACGAGATCAAAGTATCGATTGCAAGAAAA
TTGGTGCCTTTTTATAGGGATTTTTATGAGTACTATATGGTAGTATTGAGTGGGGAAAAA
GATTTGGAGGTGTTGGTAAGATTTTCACCTGATAATATTGGGAATTGTTTGTCTGATTTA
TTTCATGAAAATGTTAGGTCAAGGAGTTTAATATTGTCATCATCAACATCATTGCCAAAT
TCATGTGTTTGGCAATGTATTTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040698
PEP Infomation

pacid=37442213 transcript=PGSC0003DMT400060448 locus=PGSC0003DMG400023511 ID=PGSC0003DMT400060448.v4.03 annot-version=v4.03
Sequence

MAILDMSKREPSSPSTPQRAKKSLFSFVKTTSSLSSFSSHIPPQKPSLTFSRSIMEENID
NADTIIKKWDHKESSNEKFTSLFQEDRKEAKEYIQCVKDLKKAMHFFVTQHSTCNKLVLA
QNLMQKAMKRLENEFYQILSTKKEHLDPESVSKSSQSSHISRSISVDSSESTDLGNEIQH
TTSAESISEAEHLSLLTMSDLKMIADCMIDSGYAKECWKIYRIIRKSIVDEGLYRLGIES
RSSAYVNAMKPNVLEHQVKHWIDSTKIAVKTLFYGERFLCDHVFSTSKTINETCFSDIAK
EGGIVLLKFPEVVAKTKKSHEKIFLLMDLHETIAELLPEIESIFSFDSISSVKVQAVSSL
NKLKISVLNIISDFELSIQRNSLKTPVPGGGIHPLTNSVAEYLASLASYNGVLSYIISDS
TSTTEFSETYFDSALISETPKNSSVCAKLAWIVLVLLCKLDCKAELYNNIALSYLFLANN
IQFIIERVRGSALRIILGDEWILNLERKVKLYSTKYENVAWNKVFMCLPQSLDPSISSDM
IKEHFKRFNESFEETYQRQKSWVVPDRTLRDEIKVSIARKLVPFYRDFYEYYMVVLSGEK
DLEVLVRFSPDNIGNCLSDLFHENVRSRSLILSSSTSLPNSCVWQCIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400060448
Transcript Infomation

pacid=37442213 locus=PGSC0003DMG400023511 ID=PGSC0003DMT400060448.v4.03 annot-version=v4.03
Sequence

ATGGCGATTCTTGACATGTCTAAGAGAGAACCATCATCACCATCGACACCACAGAGAGCC
AAGAAGAGCCTATTCTCTTTCGTGAAAACCACTTCATCCCTCTCTTCCTTTTCTAGTCAT
ATACCTCCTCAGAAACCTTCGTTGACATTCTCTCGATCTATCATGGAAGAGAATATTGAT
AACGCGGACACTATTATCAAAAAATGGGATCATAAAGAATCGTCTAACGAAAAATTCACT
TCACTCTTTCAAGAAGACAGAAAAGAAGCCAAAGAATACATTCAATGTGTCAAAGACTTG
AAAAAAGCTATGCATTTTTTTGTTACACAACATTCAACTTGTAACAAACTTGTACTTGCA
CAAAACTTGATGCAAAAGGCTATGAAAAGACTAGAAAATGAATTTTACCAAATTTTGTCA
ACAAAAAAGGAGCATTTGGATCCTGAATCAGTATCCAAGTCTAGTCAATCCTCACACATA
TCGAGGTCGATTTCAGTTGATTCTTCTGAATCAACTGACCTCGGAAATGAGATTCAGCAC
ACTACTAGTGCTGAATCCATTTCCGAGGCTGAACATCTTTCACTTCTAACAATGTCTGAT
CTCAAAATGATCGCGGATTGTATGATTGACTCTGGCTATGCAAAAGAGTGTTGGAAGATC
TACAGGATCATCAGGAAATCTATCGTCGATGAAGGACTCTATCGTCTTGGAATTGAATCG
CGTAGCTCAGCTTATGTTAACGCGATGAAACCAAATGTTCTCGAACATCAAGTCAAGCAT
TGGATTGATTCAACTAAAATCGCGGTGAAAACACTCTTCTATGGAGAGAGGTTTCTTTGT
GATCATGTTTTTTCAACCTCGAAAACGATCAATGAAACATGTTTTAGTGATATAGCCAAA
GAAGGAGGAATCGTTTTGCTTAAATTTCCTGAGGTCGTTGCAAAGACGAAGAAATCACAT
GAAAAGATTTTTCTTTTAATGGATTTACACGAAACAATAGCTGAACTATTGCCAGAGATC
GAATCAATCTTCTCGTTTGATTCGATCTCATCTGTCAAAGTTCAAGCTGTTTCGTCATTA
AATAAACTTAAGATCTCTGTTCTAAATATCATCTCTGATTTCGAGCTGTCAATACAGAGG
AATTCCTTGAAAACACCAGTTCCTGGTGGGGGAATTCATCCGTTAACCAACTCTGTTGCG
GAATACTTAGCTTCGTTAGCAAGCTACAATGGAGTCCTCTCATATATCATTTCTGACTCT
ACATCAACAACGGAATTTTCTGAAACTTATTTCGACAGTGCATTGATAAGTGAAACGCCC
AAAAATTCATCAGTCTGTGCTAAATTGGCTTGGATTGTACTCGTCCTGCTTTGCAAACTC
GATTGCAAAGCAGAGTTGTACAATAACATCGCGTTATCCTATCTCTTCTTAGCTAACAAT
ATCCAATTCATTATCGAGAGGGTACGTGGAAGTGCCCTCAGGATCATATTGGGAGACGAA
TGGATATTGAACTTGGAGAGAAAGGTAAAGTTGTATTCAACAAAATACGAAAATGTAGCT
TGGAATAAGGTGTTTATGTGTTTGCCTCAGAGTTTAGATCCCTCGATTTCCTCTGATATG
ATTAAGGAACACTTCAAACGATTCAATGAATCGTTTGAAGAAACGTATCAGAGACAGAAA
TCTTGGGTTGTACCTGATAGGACTCTACGAGACGAGATCAAAGTATCGATTGCAAGAAAA
TTGGTGCCTTTTTATAGGGATTTTTATGAGTACTATATGGTAGTATTGAGTGGGGAAAAA
GATTTGGAGGTGTTGGTAAGATTTTCACCTGATAATATTGGGAATTGTTTGTCTGATTTA
TTTCATGAAAATGTTAGGTCAAGGAGTTTAATATTGTCATCATCAACATCATTGCCAAAT
TCATGTGTTTGGCAATGTATTTCTTAA