Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060447
CDS Infomation

pacid=37443049 polypeptide=PGSC0003DMP400040697 locus=PGSC0003DMG400023510 ID=PGSC0003DMT400060447.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCCTGTGGAAGAAGGTGAGAGAGATGTCGAGAAAGGACTGATTACTCCAACC
CCAAGCCATAACCCTCTAGCTGAGCCATCACCAACCCCATCTCCATCTTCCGCAACAGCA
CCAGCTCTGGTGCTTTCCAATTCTGGCAAGAGAATGGACCAAGCAGGGAAAAAGAAATAT
GTAAAACAGGTTACGGGAAGGCACAATGACACCGAGCTTCATTTAGCAGCTCAGAAAGGT
GATTTAGCAGCAGTGAAGCAGATACTTAATGACATTGATACTCAAATGGTTGGGACGCTG
AGTGGCGATGACTTTAATCAAGAGGTCGCAGAGATCAGAGCATCTGTAGTGAATGAAGTG
AATGAATTAGGAGAGACAGCACTCTTTACAGCAGCAGCGAAGGGATATATTGAGGTGTTG
AAAGAATTATTAAAGTACTGCAACAAGGATACTCTTACTAAGAAGAATCGGTCAGGATTT
GATCCTTTGCATATAGCTGCAAGTCAAGGACACCATGGAATCGTCCAATTGCTTTTAGAG
CATGATACCGGACTAAGTAAAACATTTGGCCCTTCAAATGCAACCCCTCTTATAACTGCT
GCCTCAAGAGGACATATTGCAGTGGTCAATGAACTGCTGTCAAAGGATTGCACCTTACTG
GAAATTTCTAGGTCCAATGGTAAAAATGCATTACATTTAGCTGCCAGACAAGGGCACGTG
GAAATTGTAAAGGCTTTGCTTGACAGAGATCCACAATTGGCCAGGAGGACGGATAAGAAA
GGACAAACTGCATTGCATATGGCTGTAAAGGGAATCAGTTGTGACGTGGTGATATTGCTT
CTCGAGGCTGATGCTGCTATAGTTATGCTTCCAGACAAGTTTGGCAACACAGCATTACAC
ATAGCTACCCGGAAAAAACGCGCTGAGATAGTAAGAGAGTTGCTACGCCTGCCTGATAGT
AATGTTAATGCACTGAACAGAGATCACAAAACAGCTCTTGACATAGCTGAAGATCTTCCA
CTCTCTGAAGAATCCTCAGATATAAAGGAGTGTTTATACAAATATGGAGCTGTTAGAGCT
AATGAATTGAACCAACCAAGGGATGAGTTGAGGAAAACTGTCAGTCAGATCAAGAAAGAT
ATTCACACACAGCTTGAACAAACTAAGAGGACAAATAAAAATGTCCACGGAATTGCTAAA
GAGCTTAGAAAGCTCCATCGAGAAGGGATTAATAATGCAACGAATTCTGTGACTGTTGTT
GCTGTTCTCTTTGCCACAGTTGCCTTTGCTGCTATTTTTACTGTGCCTGGAGGTGATGAT
AATCATGGAGTGGCTGTGGTTGTGAGCACTGCTTCTTTTAAGATCTTCTTCATCTTCAAC
GCCCTTGCTCTTTTTACATCTCTTGCTGTTGTCGTAGTTCAGATTACATTGGTTAGAGGA
GAAACTAAGGCAGAAAGAAGAGTTGTCGAGGTGATTAACAAATTGATGTGGTTGGCTTCT
GTCTGCACTTCAGTGGCATTTATGGCATCCTCTTATATAGTAGTCGGTCGCAAGTATGAA
TGGGCTGCAATATTGGTAACTGCAGTAGGGGGAATAATAATGGCGGGGGTTCTTGGAACC
ATGACTTACTATGTGGTAAGATCAAGGAAGAAAAGATCGATAAGGAAGAAGGAAAAACAT
GCTAGAAGTGGTTCCAACTCATGGTACCACTCTGAGTTCTCTAATTCTGACATCGACAGG
ATTTACGCCCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040697
PEP Infomation

pacid=37443049 transcript=PGSC0003DMT400060447 locus=PGSC0003DMG400023510 ID=PGSC0003DMT400060447.v4.03 annot-version=v4.03
Sequence

MASPVEEGERDVEKGLITPTPSHNPLAEPSPTPSPSSATAPALVLSNSGKRMDQAGKKKY
VKQVTGRHNDTELHLAAQKGDLAAVKQILNDIDTQMVGTLSGDDFNQEVAEIRASVVNEV
NELGETALFTAAAKGYIEVLKELLKYCNKDTLTKKNRSGFDPLHIAASQGHHGIVQLLLE
HDTGLSKTFGPSNATPLITAASRGHIAVVNELLSKDCTLLEISRSNGKNALHLAARQGHV
EIVKALLDRDPQLARRTDKKGQTALHMAVKGISCDVVILLLEADAAIVMLPDKFGNTALH
IATRKKRAEIVRELLRLPDSNVNALNRDHKTALDIAEDLPLSEESSDIKECLYKYGAVRA
NELNQPRDELRKTVSQIKKDIHTQLEQTKRTNKNVHGIAKELRKLHREGINNATNSVTVV
AVLFATVAFAAIFTVPGGDDNHGVAVVVSTASFKIFFIFNALALFTSLAVVVVQITLVRG
ETKAERRVVEVINKLMWLASVCTSVAFMASSYIVVGRKYEWAAILVTAVGGIIMAGVLGT
MTYYVVRSRKKRSIRKKEKHARSGSNSWYHSEFSNSDIDRIYAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400060447
Transcript Infomation

pacid=37443049 locus=PGSC0003DMG400023510 ID=PGSC0003DMT400060447.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCCTGTGGAAGAAGGTGAGAGAGATGTCGAGAAAGGACTGATTACTCCAACC
CCAAGCCATAACCCTCTAGCTGAGCCATCACCAACCCCATCTCCATCTTCCGCAACAGCA
CCAGCTCTGGTGCTTTCCAATTCTGGCAAGAGAATGGACCAAGCAGGGAAAAAGAAATAT
GTAAAACAGGTTACGGGAAGGCACAATGACACCGAGCTTCATTTAGCAGCTCAGAAAGGT
GATTTAGCAGCAGTGAAGCAGATACTTAATGACATTGATACTCAAATGGTTGGGACGCTG
AGTGGCGATGACTTTAATCAAGAGGTCGCAGAGATCAGAGCATCTGTAGTGAATGAAGTG
AATGAATTAGGAGAGACAGCACTCTTTACAGCAGCAGCGAAGGGATATATTGAGGTGTTG
AAAGAATTATTAAAGTACTGCAACAAGGATACTCTTACTAAGAAGAATCGGTCAGGATTT
GATCCTTTGCATATAGCTGCAAGTCAAGGACACCATGGAATCGTCCAATTGCTTTTAGAG
CATGATACCGGACTAAGTAAAACATTTGGCCCTTCAAATGCAACCCCTCTTATAACTGCT
GCCTCAAGAGGACATATTGCAGTGGTCAATGAACTGCTGTCAAAGGATTGCACCTTACTG
GAAATTTCTAGGTCCAATGGTAAAAATGCATTACATTTAGCTGCCAGACAAGGGCACGTG
GAAATTGTAAAGGCTTTGCTTGACAGAGATCCACAATTGGCCAGGAGGACGGATAAGAAA
GGACAAACTGCATTGCATATGGCTGTAAAGGGAATCAGTTGTGACGTGGTGATATTGCTT
CTCGAGGCTGATGCTGCTATAGTTATGCTTCCAGACAAGTTTGGCAACACAGCATTACAC
ATAGCTACCCGGAAAAAACGCGCTGAGATAGTAAGAGAGTTGCTACGCCTGCCTGATAGT
AATGTTAATGCACTGAACAGAGATCACAAAACAGCTCTTGACATAGCTGAAGATCTTCCA
CTCTCTGAAGAATCCTCAGATATAAAGGAGTGTTTATACAAATATGGAGCTGTTAGAGCT
AATGAATTGAACCAACCAAGGGATGAGTTGAGGAAAACTGTCAGTCAGATCAAGAAAGAT
ATTCACACACAGCTTGAACAAACTAAGAGGACAAATAAAAATGTCCACGGAATTGCTAAA
GAGCTTAGAAAGCTCCATCGAGAAGGGATTAATAATGCAACGAATTCTGTGACTGTTGTT
GCTGTTCTCTTTGCCACAGTTGCCTTTGCTGCTATTTTTACTGTGCCTGGAGGTGATGAT
AATCATGGAGTGGCTGTGGTTGTGAGCACTGCTTCTTTTAAGATCTTCTTCATCTTCAAC
GCCCTTGCTCTTTTTACATCTCTTGCTGTTGTCGTAGTTCAGATTACATTGGTTAGAGGA
GAAACTAAGGCAGAAAGAAGAGTTGTCGAGGTGATTAACAAATTGATGTGGTTGGCTTCT
GTCTGCACTTCAGTGGCATTTATGGCATCCTCTTATATAGTAGTCGGTCGCAAGTATGAA
TGGGCTGCAATATTGGTAACTGCAGTAGGGGGAATAATAATGGCGGGGGTTCTTGGAACC
ATGACTTACTATGTGGTAAGATCAAGGAAGAAAAGATCGATAAGGAAGAAGGAAAAACAT
GCTAGAAGTGGTTCCAACTCATGGTACCACTCTGAGTTCTCTAATTCTGACATCGACAGG
ATTTACGCCCTTTGA