Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060442
CDS Infomation

pacid=37444786 polypeptide=PGSC0003DMP400040693 locus=PGSC0003DMG400023508 ID=PGSC0003DMT400060442.v4.03 annot-version=v4.03
Sequence

ATGAAAACCATTATGGATTTTGCAATACTTCATTTGTTTGTTTTGGTATTGTCTGTCTTG
TGTTTGATGATATGTGCCTTAGAGTTTGATCCTGTTGATAACTATCTCATAAACTGTGGT
TCATTTGAAAATACTACTATAGGTGATAGAGTTTTCTTAGCTGATAACTTGAATTCCCCT
CAAAGGGTATTTGTTAATACAACTCTAGAGTCTATTCCATCTAGTTATAGTTCAAATCTT
TATCGAACTGCTAGAATTCTTAATGAGACTTCAAAATTCACATTTTCAATCAAGAAACAA
GGGCGCCATTGGATTCGCCTGTATTTCTATCCGTTTTCGTATGGAAATTTCACTCTTAGT
TCTGCTAAGTTCTCTGTTTCTATTCAGAACTTCACTTTGATCAAGAGCTTTCAATCATTG
AGTGGTCCTTTAGTAAAAGAGTACACTTTGAACATTACTAGTACTAGTCTTGTTCTTACG
TTTACGCCTTTTTCTAGCTCGTTTGCATTTGTAAATGCGTTGGAAATCATTTCACTTCCT
GATGAGCTCATTCCTGTTGGTATTGGAACTCATAGTTTGAGGGAACAAGCTTTAGAAACA
GTTGTGAGGGTGAATATGGGGAATGTTGCAGTGTTGCCTCGAAATGATACCTCGTGGCGA
TCTTGGGAATCTGATGAAAGATACTTAACAAGCAGGAATCTTTTTCAGTTTGTATCGAGG
ACACAAGCTGTGAATTACACACGAGGAGGGACTTCTAGGAATATTGCCCCTCCATCGGTG
TATGGGACTGCTACGAGGCTGCAAGTGGATGATCCCGCTGTTTCTATAAACATCACGTGG
TTGTTTGATGTTGATCCTGGCTTCGATTATTTCATCAGGTTCCACTTTTGTGACATAGTA
ACTGGCTACAATGATCCAAACAGAGTAGGTGGCGACCATGAACTATTATTCAATGTTTAC
ATTAATTCCCAATTTGCTTCGAGGGACCTTGATCTTAAAAACAAGACATCAAATGTCCTT
GGTTCTCCGTATTACATGGATGTTTTTACAAGGTTAGAGAACATTCACAGCATTGGCATT
AGCATTGGTCCAGCAGGTATACGTAATGCATATCCGGATGGCCTCCTGAATGGTCTCGAG
ATCATGAAAATAAGCAATGTCAAGGGAAGTCTTGATGCCTCAGACGCTGAGATTCAGTCC
TCGGTGCCTACTTCAAAGAAGACTAAAACATGGTTGATCATTGGATCAACTATTGGAGGA
TCGACTATTTGCATCGTTTTGGTTGTGGTGTCTATTCTCTTTTGCAGAAGTAGAATACAG
ACAGCTGTTGATGACTCAACAGAGGAAAATCATACAGCAGTTGGAGCTAAAGAAGCATCT
ATCATTTCCAAGTCGAATATGGGGTACCTGTTCCCTCTTGTAGCAGTTCAGGAAGCAACC
GATCACTTCAGTGAAAGCATGATCATAGGCTTTGGTGGTTTTGGAAAAGTTTACAAGGGA
ATTTTGAAGGATAACACAAAGGTGGCAGTGAAGAGAGGATTTCATCAATCACAACAAGGT
CTTGCCGAGTTCATGACTGAAGTCGAAATGCTGTCTCAGTTTAGACATCGCCATTTGGTC
TCACTGATCGGTTACTGTAATGAAAAGAATGAGATGATAATCATTTACGAGTACATGGAG
AATGGAACTCTTAAGGATCATCTCTATGGCTCGGACCTTCCGAATTTGAATTGGACACAA
AGGCTTGAAATTTGCATAGGATCAGCAAAAGGACTTCACTATCTGCATACTGGTTCTCAT
AAGGCAATCATACACCGAGATGTCAAGTCCTCGAATATACTTCTAGATGAAAATCTCCAG
GCTAAAGTTTCTGATTTTGGACTATCGAAAATTGGTCCAGAAATTGATCAAACACATGTT
AGTACTGCAGTGAAAGGAAGTTTTGGATATCTTGATCCAGAGTATTTGACAAGGCAACAA
CTAACCGATAAATCTGATGTTTATTCCTTTGGTGTTGTTATGTTTGAAGTCCTCTGTGGA
AGGCCCGTTATCAATCCCTCTCTTCCCAGAGAATCAGTAAACTTGGTTGAATATGTGATG
AAATGTTTAAGTACAGGAGAAGCGGAGGCAATCATTGATCCTAGGATTGCACATGAGATT
ACACCAGAATCCCTGATGAAGTTTGTAGAGACTGCTGAGAAATGCTTGGCTGAATATGGT
GCAGACCGGCCAACTATGGGAGAAGTTTTGTGGAACTTGGAATATGCATTGAAACTTCAA
GGGAAAGACGAAAAAACAACACAAGAGAACGAGATATCGGATAATCAGTTAGATAACAGT
GTCTTAAGTACAGAATACAGCATGGGGAGTATGGCTGATCTTGCTGGTGTTTCAATGAGC
AAAGTTTTTTGCCAAATGGTAAAATCTGAAAACAAAAACTCATGTGATATATGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040693
PEP Infomation

pacid=37444786 transcript=PGSC0003DMT400060442 locus=PGSC0003DMG400023508 ID=PGSC0003DMT400060442.v4.03 annot-version=v4.03
Sequence

MKTIMDFAILHLFVLVLSVLCLMICALEFDPVDNYLINCGSFENTTIGDRVFLADNLNSP
QRVFVNTTLESIPSSYSSNLYRTARILNETSKFTFSIKKQGRHWIRLYFYPFSYGNFTLS
SAKFSVSIQNFTLIKSFQSLSGPLVKEYTLNITSTSLVLTFTPFSSSFAFVNALEIISLP
DELIPVGIGTHSLREQALETVVRVNMGNVAVLPRNDTSWRSWESDERYLTSRNLFQFVSR
TQAVNYTRGGTSRNIAPPSVYGTATRLQVDDPAVSINITWLFDVDPGFDYFIRFHFCDIV
TGYNDPNRVGGDHELLFNVYINSQFASRDLDLKNKTSNVLGSPYYMDVFTRLENIHSIGI
SIGPAGIRNAYPDGLLNGLEIMKISNVKGSLDASDAEIQSSVPTSKKTKTWLIIGSTIGG
STICIVLVVVSILFCRSRIQTAVDDSTEENHTAVGAKEASIISKSNMGYLFPLVAVQEAT
DHFSESMIIGFGGFGKVYKGILKDNTKVAVKRGFHQSQQGLAEFMTEVEMLSQFRHRHLV
SLIGYCNEKNEMIIIYEYMENGTLKDHLYGSDLPNLNWTQRLEICIGSAKGLHYLHTGSH
KAIIHRDVKSSNILLDENLQAKVSDFGLSKIGPEIDQTHVSTAVKGSFGYLDPEYLTRQQ
LTDKSDVYSFGVVMFEVLCGRPVINPSLPRESVNLVEYVMKCLSTGEAEAIIDPRIAHEI
TPESLMKFVETAEKCLAEYGADRPTMGEVLWNLEYALKLQGKDEKTTQENEISDNQLDNS
VLSTEYSMGSMADLAGVSMSKVFCQMVKSENKNSCDIC*

Transcript Sequence

Transcript ID

PGSC0003DMT400060442
Transcript Infomation

pacid=37444786 locus=PGSC0003DMG400023508 ID=PGSC0003DMT400060442.v4.03 annot-version=v4.03
Sequence

ATGAAAACCATTATGGATTTTGCAATACTTCATTTGTTTGTTTTGGTATTGTCTGTCTTG
TGTTTGATGATATGTGCCTTAGAGTTTGATCCTGTTGATAACTATCTCATAAACTGTGGT
TCATTTGAAAATACTACTATAGGTGATAGAGTTTTCTTAGCTGATAACTTGAATTCCCCT
CAAAGGGTATTTGTTAATACAACTCTAGAGTCTATTCCATCTAGTTATAGTTCAAATCTT
TATCGAACTGCTAGAATTCTTAATGAGACTTCAAAATTCACATTTTCAATCAAGAAACAA
GGGCGCCATTGGATTCGCCTGTATTTCTATCCGTTTTCGTATGGAAATTTCACTCTTAGT
TCTGCTAAGTTCTCTGTTTCTATTCAGAACTTCACTTTGATCAAGAGCTTTCAATCATTG
AGTGGTCCTTTAGTAAAAGAGTACACTTTGAACATTACTAGTACTAGTCTTGTTCTTACG
TTTACGCCTTTTTCTAGCTCGTTTGCATTTGTAAATGCGTTGGAAATCATTTCACTTCCT
GATGAGCTCATTCCTGTTGGTATTGGAACTCATAGTTTGAGGGAACAAGCTTTAGAAACA
GTTGTGAGGGTGAATATGGGGAATGTTGCAGTGTTGCCTCGAAATGATACCTCGTGGCGA
TCTTGGGAATCTGATGAAAGATACTTAACAAGCAGGAATCTTTTTCAGTTTGTATCGAGG
ACACAAGCTGTGAATTACACACGAGGAGGGACTTCTAGGAATATTGCCCCTCCATCGGTG
TATGGGACTGCTACGAGGCTGCAAGTGGATGATCCCGCTGTTTCTATAAACATCACGTGG
TTGTTTGATGTTGATCCTGGCTTCGATTATTTCATCAGGTTCCACTTTTGTGACATAGTA
ACTGGCTACAATGATCCAAACAGAGTAGGTGGCGACCATGAACTATTATTCAATGTTTAC
ATTAATTCCCAATTTGCTTCGAGGGACCTTGATCTTAAAAACAAGACATCAAATGTCCTT
GGTTCTCCGTATTACATGGATGTTTTTACAAGGTTAGAGAACATTCACAGCATTGGCATT
AGCATTGGTCCAGCAGGTATACGTAATGCATATCCGGATGGCCTCCTGAATGGTCTCGAG
ATCATGAAAATAAGCAATGTCAAGGGAAGTCTTGATGCCTCAGACGCTGAGATTCAGTCC
TCGGTGCCTACTTCAAAGAAGACTAAAACATGGTTGATCATTGGATCAACTATTGGAGGA
TCGACTATTTGCATCGTTTTGGTTGTGGTGTCTATTCTCTTTTGCAGAAGTAGAATACAG
ACAGCTGTTGATGACTCAACAGAGGAAAATCATACAGCAGTTGGAGCTAAAGAAGCATCT
ATCATTTCCAAGTCGAATATGGGGTACCTGTTCCCTCTTGTAGCAGTTCAGGAAGCAACC
GATCACTTCAGTGAAAGCATGATCATAGGCTTTGGTGGTTTTGGAAAAGTTTACAAGGGA
ATTTTGAAGGATAACACAAAGGTGGCAGTGAAGAGAGGATTTCATCAATCACAACAAGGT
CTTGCCGAGTTCATGACTGAAGTCGAAATGCTGTCTCAGTTTAGACATCGCCATTTGGTC
TCACTGATCGGTTACTGTAATGAAAAGAATGAGATGATAATCATTTACGAGTACATGGAG
AATGGAACTCTTAAGGATCATCTCTATGGCTCGGACCTTCCGAATTTGAATTGGACACAA
AGGCTTGAAATTTGCATAGGATCAGCAAAAGGACTTCACTATCTGCATACTGGTTCTCAT
AAGGCAATCATACACCGAGATGTCAAGTCCTCGAATATACTTCTAGATGAAAATCTCCAG
GCTAAAGTTTCTGATTTTGGACTATCGAAAATTGGTCCAGAAATTGATCAAACACATGTT
AGTACTGCAGTGAAAGGAAGTTTTGGATATCTTGATCCAGAGTATTTGACAAGGCAACAA
CTAACCGATAAATCTGATGTTTATTCCTTTGGTGTTGTTATGTTTGAAGTCCTCTGTGGA
AGGCCCGTTATCAATCCCTCTCTTCCCAGAGAATCAGTAAACTTGGTTGAATATGTGATG
AAATGTTTAAGTACAGGAGAAGCGGAGGCAATCATTGATCCTAGGATTGCACATGAGATT
ACACCAGAATCCCTGATGAAGTTTGTAGAGACTGCTGAGAAATGCTTGGCTGAATATGGT
GCAGACCGGCCAACTATGGGAGAAGTTTTGTGGAACTTGGAATATGCATTGAAACTTCAA
GGGAAAGACGAAAAAACAACACAAGAGAACGAGATATCGGATAATCAGTTAGATAACAGT
GTCTTAAGTACAGAATACAGCATGGGGAGTATGGCTGATCTTGCTGGTGTTTCAATGAGC
AAAGTTTTTTGCCAAATGGTAAAATCTGAAAACAAAAACTCATGTGATATATGTTAG