Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060440
CDS Infomation

pacid=37443714 polypeptide=PGSC0003DMP400040691 locus=PGSC0003DMG400023507 ID=PGSC0003DMT400060440.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAGAAAAATCGAATTATAGGAGAGAAAGAGGATCCAGGGACGGAGAGGGCGAC
GACGATCACCGCCGTCATCGTCACCGTTCGAAGCATCACCGTGACGTAGAGAACCGACAC
CGGTCCGATGATCGGCGACGTCGAGACCGTGAGAGATCGATTGAACGTGAAGGAAGCAGA
GATAGAGGTCACGATAGCGAGGATGAGAATCAACGTCAGATCGATGATCGGCGACGAGAT
CGTGAAACGGAAGGAAGCATAGATAGAGCTTATGATCGTGAAAGGCGTGAGAAATCACGT
GATCGGGATAGATGCGAGAAATCGTTTGAGTTAGAAGTTAACAGAGAGGATTCAATGGAG
AGAAGAAATTCGCATAAGAGGAAAGATAGAGGAGAGAATGTGGATAAGAGGAATGTAGAT
GAGAAGAGAGCTAGGGGTTCGGAGGTTAAGAAGGACAAACTGAGAGTTGGGGATGTGAAG
TTGATGGATAAGGAAGATGTGGAAATCGATGAAGAAAAGAAGGGAAAAGGATTTGAAATG
AGAACTGTGAAGGAAGAACCGAAACCGGAGCCCTATGACGATGGACAGGGTGTTGATACC
ATTGATACTAGTGTGGCAATGGGATCATACAGTGCAGCATCAAGGACTTCCCCTGATAAA
CCTTTGACTCGTAGTGATTCTCCTGCTACCAAGGTATCTTCAATTTCTACCACAAATGAA
AATAAGGGAGTTAATATTAACAGATTTCATAAGGTTCTTGGGAAATCTAGTACAGATGGG
GCAGCTCGTGACACTGGCAAGAGTGCGACCTTATCCATTGATGCTAAAGGAAATGCAAAC
GATCTCAAACAAAGGCATAAGGCGCTGAAAGAAAAGCTTAAGAGAATTCCTTTGTTAATC
AAGGGTGCCAACTCTACGAGAGATGGAAGTTCACAAATGGGTTCCAAGGAGAGCCTTAAA
GCCCCTTCAACCAATGTGGCGATATTGCCACCACCAGTTGCATCTTCAGATGCAGGGATA
TTACCCACTCCAGGTTCAGAACGTAGCACATCATCTATAGCTACCATGGTTTCTGTTAAT
ATGCTACCCAGTAGCTTGCCTCATGTTGCGGGCCTCACAGCACAGAGCTACGAAGCGATG
AAGCGTGCGCAGGAGTTTTCTGCTAAGATCGAATTCCGGCAGGACCCGGAGTGTCCCTCC
CTCACTAACATGTTTCCTGGGCAAATGCCTCCAGAGGTTATAATTCAGCCAAAACTCGCT
AAAGCCACCGTTCTTCGTTTGGATGCATTTGGCAGGGAAATTGATGAGCAGGGAAATGTG
GTCAATGTGCCTAAGCCATCTAGTACCCTTAAGGTAAACATCAATAAGCAGAACAAAGAG
AGCTTCCAACTTCTCAAACCTGAACTTGACATTGATCCTGATAAAAATCCTCATTTTGAT
CCGAGGATGGGCATTGACAAGAACAAAATATTGAGGCCCAAGAAGATGTCATTTCAGTTT
GTGGAGGAAGGTAAATGGTCCCGAGACGCAGAAATAATCAAGTTAAAGAGCCAATTTGGT
GAATTACGAACCAAAGAGCTGAGGATAAAGCAAGTGCAATTGGCAAAGGCAAAAGCAGAG
CCTGACATAAATCCAAATCTTATTGAGGTGTCAGAGAGGATTATCACCAAAGAAAAATCA
AAGGAACCAATACCTGATGTTGAGTGGTGGGAAGCTCCTCTGTTACGATCTGGTGCTTAT
GGTGTTATGGTCAACGGTAACTTAACTGATGATATGTTGAAGATGGAGAGGATCACCATT
TATGTGGAACACCCCCGTCCTATTGAGCCTCCTGCTGAACCTGCTCCACCTCCTCCACAG
CCACTGAAGCTGACCAAGAAGGAGCAGAAGAAAATGCGCACCCGGCGCCGAATGGATCAG
GAGAGAGAAAAGCAGGAAATGATACGTCAGGGCCTGTTAGAACCACCAAAACCAAAAATT
AAAATGAGCAATCTTATGAGAGTCCTTGGCTCAGAAGCCACTCAGGATCCCACAAAGCTT
GAAAAGGAGATTAGAAGTGCTGCTGCTGAGCGCGAGCAGGCTCATATAGACAGAAATCTT
TCTCGGAAGCTCACTCCTGATGAGCTTCGTGAGAAGAAAGAAAGGAAACTCTTTGACGAC
CCAACTATTGCGCCAGAGACGATAGTTTCAGTATACAGGATCAATGACCTTTCACACCCT
CGAACTCGCTTCAAGGTCGATGTCAATGCACAGGAGAATCGCATGACGGGGTGTGCGGTT
ATCTTGGGAGATATAAATGTGGTGGTAGTTGAAGGTGGTAAAAAGTCCATCAAGCGATAT
GGGAAACTTATGCTTAGGCGAATAGATTGGGCTGCTGCTGTTAAGAAAGAAGACGAAGAC
GAAGATGAAGAGAAGCCTCTCAACAAGTGTGTGTTAGTCTGGCAAGGGATTGTTGCTAAA
TCGAGCTTTCATAGGTTTTTGGTTCACGAGTGCAGGACTGAGGCTGCTGCTCGTAAGGTC
TTTGCTGATGCTGGGGTTCTTCATTACTGGAATTTTGCTGTAGACTTCAAAGATGATGAG
CTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040691
PEP Infomation

pacid=37443714 transcript=PGSC0003DMT400060440 locus=PGSC0003DMG400023507 ID=PGSC0003DMT400060440.v4.03 annot-version=v4.03
Sequence

MEREKSNYRRERGSRDGEGDDDHRRHRHRSKHHRDVENRHRSDDRRRRDRERSIEREGSR
DRGHDSEDENQRQIDDRRRDRETEGSIDRAYDRERREKSRDRDRCEKSFELEVNREDSME
RRNSHKRKDRGENVDKRNVDEKRARGSEVKKDKLRVGDVKLMDKEDVEIDEEKKGKGFEM
RTVKEEPKPEPYDDGQGVDTIDTSVAMGSYSAASRTSPDKPLTRSDSPATKVSSISTTNE
NKGVNINRFHKVLGKSSTDGAARDTGKSATLSIDAKGNANDLKQRHKALKEKLKRIPLLI
KGANSTRDGSSQMGSKESLKAPSTNVAILPPPVASSDAGILPTPGSERSTSSIATMVSVN
MLPSSLPHVAGLTAQSYEAMKRAQEFSAKIEFRQDPECPSLTNMFPGQMPPEVIIQPKLA
KATVLRLDAFGREIDEQGNVVNVPKPSSTLKVNINKQNKESFQLLKPELDIDPDKNPHFD
PRMGIDKNKILRPKKMSFQFVEEGKWSRDAEIIKLKSQFGELRTKELRIKQVQLAKAKAE
PDINPNLIEVSERIITKEKSKEPIPDVEWWEAPLLRSGAYGVMVNGNLTDDMLKMERITI
YVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKMRTRRRMDQEREKQEMIRQGLLEPPKPKI
KMSNLMRVLGSEATQDPTKLEKEIRSAAAEREQAHIDRNLSRKLTPDELREKKERKLFDD
PTIAPETIVSVYRINDLSHPRTRFKVDVNAQENRMTGCAVILGDINVVVVEGGKKSIKRY
GKLMLRRIDWAAAVKKEDEDEDEEKPLNKCVLVWQGIVAKSSFHRFLVHECRTEAAARKV
FADAGVLHYWNFAVDFKDDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400060440
Transcript Infomation

pacid=37443714 locus=PGSC0003DMG400023507 ID=PGSC0003DMT400060440.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAGAAAAATCGAATTATAGGAGAGAAAGAGGATCCAGGGACGGAGAGGGCGAC
GACGATCACCGCCGTCATCGTCACCGTTCGAAGCATCACCGTGACGTAGAGAACCGACAC
CGGTCCGATGATCGGCGACGTCGAGACCGTGAGAGATCGATTGAACGTGAAGGAAGCAGA
GATAGAGGTCACGATAGCGAGGATGAGAATCAACGTCAGATCGATGATCGGCGACGAGAT
CGTGAAACGGAAGGAAGCATAGATAGAGCTTATGATCGTGAAAGGCGTGAGAAATCACGT
GATCGGGATAGATGCGAGAAATCGTTTGAGTTAGAAGTTAACAGAGAGGATTCAATGGAG
AGAAGAAATTCGCATAAGAGGAAAGATAGAGGAGAGAATGTGGATAAGAGGAATGTAGAT
GAGAAGAGAGCTAGGGGTTCGGAGGTTAAGAAGGACAAACTGAGAGTTGGGGATGTGAAG
TTGATGGATAAGGAAGATGTGGAAATCGATGAAGAAAAGAAGGGAAAAGGATTTGAAATG
AGAACTGTGAAGGAAGAACCGAAACCGGAGCCCTATGACGATGGACAGGGTGTTGATACC
ATTGATACTAGTGTGGCAATGGGATCATACAGTGCAGCATCAAGGACTTCCCCTGATAAA
CCTTTGACTCGTAGTGATTCTCCTGCTACCAAGGTATCTTCAATTTCTACCACAAATGAA
AATAAGGGAGTTAATATTAACAGATTTCATAAGGTTCTTGGGAAATCTAGTACAGATGGG
GCAGCTCGTGACACTGGCAAGAGTGCGACCTTATCCATTGATGCTAAAGGAAATGCAAAC
GATCTCAAACAAAGGCATAAGGCGCTGAAAGAAAAGCTTAAGAGAATTCCTTTGTTAATC
AAGGGTGCCAACTCTACGAGAGATGGAAGTTCACAAATGGGTTCCAAGGAGAGCCTTAAA
GCCCCTTCAACCAATGTGGCGATATTGCCACCACCAGTTGCATCTTCAGATGCAGGGATA
TTACCCACTCCAGGTTCAGAACGTAGCACATCATCTATAGCTACCATGGTTTCTGTTAAT
ATGCTACCCAGTAGCTTGCCTCATGTTGCGGGCCTCACAGCACAGAGCTACGAAGCGATG
AAGCGTGCGCAGGAGTTTTCTGCTAAGATCGAATTCCGGCAGGACCCGGAGTGTCCCTCC
CTCACTAACATGTTTCCTGGGCAAATGCCTCCAGAGGTTATAATTCAGCCAAAACTCGCT
AAAGCCACCGTTCTTCGTTTGGATGCATTTGGCAGGGAAATTGATGAGCAGGGAAATGTG
GTCAATGTGCCTAAGCCATCTAGTACCCTTAAGGTAAACATCAATAAGCAGAACAAAGAG
AGCTTCCAACTTCTCAAACCTGAACTTGACATTGATCCTGATAAAAATCCTCATTTTGAT
CCGAGGATGGGCATTGACAAGAACAAAATATTGAGGCCCAAGAAGATGTCATTTCAGTTT
GTGGAGGAAGGTAAATGGTCCCGAGACGCAGAAATAATCAAGTTAAAGAGCCAATTTGGT
GAATTACGAACCAAAGAGCTGAGGATAAAGCAAGTGCAATTGGCAAAGGCAAAAGCAGAG
CCTGACATAAATCCAAATCTTATTGAGGTGTCAGAGAGGATTATCACCAAAGAAAAATCA
AAGGAACCAATACCTGATGTTGAGTGGTGGGAAGCTCCTCTGTTACGATCTGGTGCTTAT
GGTGTTATGGTCAACGGTAACTTAACTGATGATATGTTGAAGATGGAGAGGATCACCATT
TATGTGGAACACCCCCGTCCTATTGAGCCTCCTGCTGAACCTGCTCCACCTCCTCCACAG
CCACTGAAGCTGACCAAGAAGGAGCAGAAGAAAATGCGCACCCGGCGCCGAATGGATCAG
GAGAGAGAAAAGCAGGAAATGATACGTCAGGGCCTGTTAGAACCACCAAAACCAAAAATT
AAAATGAGCAATCTTATGAGAGTCCTTGGCTCAGAAGCCACTCAGGATCCCACAAAGCTT
GAAAAGGAGATTAGAAGTGCTGCTGCTGAGCGCGAGCAGGCTCATATAGACAGAAATCTT
TCTCGGAAGCTCACTCCTGATGAGCTTCGTGAGAAGAAAGAAAGGAAACTCTTTGACGAC
CCAACTATTGCGCCAGAGACGATAGTTTCAGTATACAGGATCAATGACCTTTCACACCCT
CGAACTCGCTTCAAGGTCGATGTCAATGCACAGGAGAATCGCATGACGGGGTGTGCGGTT
ATCTTGGGAGATATAAATGTGGTGGTAGTTGAAGGTGGTAAAAAGTCCATCAAGCGATAT
GGGAAACTTATGCTTAGGCGAATAGATTGGGCTGCTGCTGTTAAGAAAGAAGACGAAGAC
GAAGATGAAGAGAAGCCTCTCAACAAGTGTGTGTTAGTCTGGCAAGGGATTGTTGCTAAA
TCGAGCTTTCATAGGTTTTTGGTTCACGAGTGCAGGACTGAGGCTGCTGCTCGTAAGGTC
TTTGCTGATGCTGGGGTTCTTCATTACTGGAATTTTGCTGTAGACTTCAAAGATGATGAG
CTTTAA