Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060434
CDS Infomation

pacid=37442678 polypeptide=PGSC0003DMP400040685 locus=PGSC0003DMG401023504 ID=PGSC0003DMT400060434.v4.03 annot-version=v4.03
Sequence

ATGAAGAAATTCTTCTTTTTCCGGACATCATCTAATGATGCAAACAACCCTTCACCACCA
TCGAAGGAGAAGTCATCTAACAGTATTGACAAATCACAGAGCAGAAAGGAAGTTTCTTCT
CCAAGTCTTAGAAGGAGTCTTTCATTGTCCTCTGGATCCTTTTACGACAGTGGGTCAGGA
AAAAAGAATTTCAGGGATCCGAGCAGATCTCCATGTCACAATAAGAAAGTTCATCCTAAG
AAATCTGGTCGTGATTCATGCCGTGGTCGCGCACGTACTCCTGAGAGGCAACCCCCAGAG
AATTTCTTTCAGAGACATGATACAGAAAATGGTTATTTGTTAAGGAAGCACAGTTCTGGT
GCGTCTTTCAGTACACACCACTATGATCCATCAGAGAGCTCTTCTCATTGCTCCAGTAAC
GTCTCTAGTAAAGTTTTAGATCGGTATATAGATGGGGAGCAAGAGCAGGAAAAGAGGGCC
TCAGCTAACCTCTTTCCTACGGAAGATGATCTTGAGATTGGGTATGCCTGCAGACAGCTG
CCTCCAAGAGTTCACCTTACAGGTCCTGGTTCGCCACTAGCTGATGTCAGGAGGCAGAGA
CCAATGTCTCAATCTTTCAGAGAAACAAAACCATCTAAACTTTGTTTTACGTCTGGAGAG
TTGGGTGATACAGGTTTTGAGCATGAATCTCCGCGAAAACTTGCAAAGAAGGTGGTTGAG
AGGCTCTCTCAGTCTCGGTCAATGGCGAAAATAAGTTCAGAAGATTTTGATTCCGATGGT
CCAATTACTATTGAAGATATCTACAGTGGAAATCTAAGTAGATGTCCAAGTGTATGTTCT
GATGGTGTTCCCCAGAAGAGCTGTTCAGCAGATGATCCTAATGGTAGGACCTACGAATAT
CACCATGCAGAGATTCCAGGCCTTGATGAGAAAAACTATTTGGAAGACGATTCAGATTTG
GTATTATTAAGAAAACTTAAGGAAGCTGAGGAGCGTGTTGTGTTGCTCTCAGAAGAGCTT
GAAGAGGGAAAATTTCTTCATGGCAGAGGCCTTAGTGTTCCAATGTTGATTCAGACTATT
AGAAGCTTGACAGAGGAGAAGGTACAAATGGCTTTTGAAGTTTCAAGCATGCTACAGGAT
CAAGTTGCTGAAAGGGCTTCTGCTAAGGAAGAAGCCAAACTATTACAGGAAGAATTAGAC
TCACGGACACGGAGATTGGAGACGGAGAAGAATGAATTACAATCAGCACTGGAAAAGGAG
TTGGATAGAAGATCCAGCGAGTGGTCTCTAAAACTTGAGAAATACCAAATTGAAGAACAT
AGACTCCGTGAAAGGGTGAGAGAGCTGGCAGAGCAGAATGTCTCTCTACAAAGGGAAGTC
TCTTCATTTAATGAGAAGGAAGTGGATAATAGAAGCAAGATATCATTTTCAGAGAAACAA
CTTGAAGATTTGTCTAAGAGAATTGAAGAAGTGTCAGAGGAGAATCAAAATCTAAGGCAG
CAGCTTTCTCAGTTACAAGAGGAATATCGAGTAGCTCAAGACGACCGAGAGTATGTCCGG
GAAAACTACCAGGAAAAGGTTAAAGAATGCGAGGACCTGCACAGATCTATTGCTAGATTG
CAACGGACTTGCAATGAACAAGAGAAGACAATTGATGGTCTGCGAGGATTTTGTGAGGAT
GTTGGCAAGAAGACTCCAGCAAACTACGACAACCAGTTGGAGAAGTTGCAAGTAGAGCAA
ATAAGATTGGTAGGTGTGGAACGTGCTCTAAGGAAGGAGGTGGAGTCTTTTCGGATCCAA
ATTGATTCTCTACGCCATGAAAATATTAGCTTGTTGAATCGTTTAAGAGGCAATGGAAAG
GAGGGTGGGTTCTCAACTTTTAAGCTAGATCAGGAATTATGCAATCGTGTTTGCTGCTTG
CAAAATCAGGGGCTTAATTTGCTTAGGGAGAGCAGCCAGCTTTGTGGAAAGTTATTAGAG
TACACAAAAGAAAATGTCAGACAAAATGGGGGAATTGATGGTCAATTCTTAATTGAATGC
AATGTAAAGATCCAGGGTCTTAAGAGGGGAATTGAAACTCTGACAAGCAGCTTGCAGACG
GTGTCATCTGTGATAAATGAGAAGTCCTATCCAGTAAATTCAGATTCTCAGCCATCTAGC
AGGGGTGATGCATTTCACCAGCAAAACAGTCAGAAACCAGACGAAATCAAGCAATCAGAG
CTCAAATCGGAGACTTTGCTGACAGCTGTGTTAAGGGAGAAGCTTTATTCCAAGGAGATG
GATATAGAGCAACTTCAGGCTGATCTGGCAGCAGCAGTTAGAGGTAACGATATCCTCAAA
TGTGAAGTCCAAAATGCGCTGGACACTCTTTCTTGTGCCAAACACAAGTTGAAAGATCTT
GAGCTTCAGATGATAAAAAAGGACGAAAATATCAACCAGCTCCAGAATGATTTGCAAGAA
TGCATGAAGGAACTTAGCCTCATGAAGGGGATACTACCAAAAGTATCTCAGGAAAGAGAT
TTCATGTGGGAGGAAGTTAAGAACTACAGTGAGAAGAACATGTTGTTGAACTCTGAGGTC
AACACGTTGAAAAAGAAGGTAGAGACACTCGATGAAGACATACTTATGAAGGAAGGTCAA
ATCACAATCTTGAAGGACAGCATAGGCAAGCCTTTCGATCTTCTTGCAAGCCCTGATTCT
ACTAGAGAATTTCTGCTGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040685
PEP Infomation

pacid=37442678 transcript=PGSC0003DMT400060434 locus=PGSC0003DMG401023504 ID=PGSC0003DMT400060434.v4.03 annot-version=v4.03
Sequence

MKKFFFFRTSSNDANNPSPPSKEKSSNSIDKSQSRKEVSSPSLRRSLSLSSGSFYDSGSG
KKNFRDPSRSPCHNKKVHPKKSGRDSCRGRARTPERQPPENFFQRHDTENGYLLRKHSSG
ASFSTHHYDPSESSSHCSSNVSSKVLDRYIDGEQEQEKRASANLFPTEDDLEIGYACRQL
PPRVHLTGPGSPLADVRRQRPMSQSFRETKPSKLCFTSGELGDTGFEHESPRKLAKKVVE
RLSQSRSMAKISSEDFDSDGPITIEDIYSGNLSRCPSVCSDGVPQKSCSADDPNGRTYEY
HHAEIPGLDEKNYLEDDSDLVLLRKLKEAEERVVLLSEELEEGKFLHGRGLSVPMLIQTI
RSLTEEKVQMAFEVSSMLQDQVAERASAKEEAKLLQEELDSRTRRLETEKNELQSALEKE
LDRRSSEWSLKLEKYQIEEHRLRERVRELAEQNVSLQREVSSFNEKEVDNRSKISFSEKQ
LEDLSKRIEEVSEENQNLRQQLSQLQEEYRVAQDDREYVRENYQEKVKECEDLHRSIARL
QRTCNEQEKTIDGLRGFCEDVGKKTPANYDNQLEKLQVEQIRLVGVERALRKEVESFRIQ
IDSLRHENISLLNRLRGNGKEGGFSTFKLDQELCNRVCCLQNQGLNLLRESSQLCGKLLE
YTKENVRQNGGIDGQFLIECNVKIQGLKRGIETLTSSLQTVSSVINEKSYPVNSDSQPSS
RGDAFHQQNSQKPDEIKQSELKSETLLTAVLREKLYSKEMDIEQLQADLAAAVRGNDILK
CEVQNALDTLSCAKHKLKDLELQMIKKDENINQLQNDLQECMKELSLMKGILPKVSQERD
FMWEEVKNYSEKNMLLNSEVNTLKKKVETLDEDILMKEGQITILKDSIGKPFDLLASPDS
TREFLLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400060434
Transcript Infomation

pacid=37442678 locus=PGSC0003DMG401023504 ID=PGSC0003DMT400060434.v4.03 annot-version=v4.03
Sequence

ATGAAGAAATTCTTCTTTTTCCGGACATCATCTAATGATGCAAACAACCCTTCACCACCA
TCGAAGGAGAAGTCATCTAACAGTATTGACAAATCACAGAGCAGAAAGGAAGTTTCTTCT
CCAAGTCTTAGAAGGAGTCTTTCATTGTCCTCTGGATCCTTTTACGACAGTGGGTCAGGA
AAAAAGAATTTCAGGGATCCGAGCAGATCTCCATGTCACAATAAGAAAGTTCATCCTAAG
AAATCTGGTCGTGATTCATGCCGTGGTCGCGCACGTACTCCTGAGAGGCAACCCCCAGAG
AATTTCTTTCAGAGACATGATACAGAAAATGGTTATTTGTTAAGGAAGCACAGTTCTGGT
GCGTCTTTCAGTACACACCACTATGATCCATCAGAGAGCTCTTCTCATTGCTCCAGTAAC
GTCTCTAGTAAAGTTTTAGATCGGTATATAGATGGGGAGCAAGAGCAGGAAAAGAGGGCC
TCAGCTAACCTCTTTCCTACGGAAGATGATCTTGAGATTGGGTATGCCTGCAGACAGCTG
CCTCCAAGAGTTCACCTTACAGGTCCTGGTTCGCCACTAGCTGATGTCAGGAGGCAGAGA
CCAATGTCTCAATCTTTCAGAGAAACAAAACCATCTAAACTTTGTTTTACGTCTGGAGAG
TTGGGTGATACAGGTTTTGAGCATGAATCTCCGCGAAAACTTGCAAAGAAGGTGGTTGAG
AGGCTCTCTCAGTCTCGGTCAATGGCGAAAATAAGTTCAGAAGATTTTGATTCCGATGGT
CCAATTACTATTGAAGATATCTACAGTGGAAATCTAAGTAGATGTCCAAGTGTATGTTCT
GATGGTGTTCCCCAGAAGAGCTGTTCAGCAGATGATCCTAATGGTAGGACCTACGAATAT
CACCATGCAGAGATTCCAGGCCTTGATGAGAAAAACTATTTGGAAGACGATTCAGATTTG
GTATTATTAAGAAAACTTAAGGAAGCTGAGGAGCGTGTTGTGTTGCTCTCAGAAGAGCTT
GAAGAGGGAAAATTTCTTCATGGCAGAGGCCTTAGTGTTCCAATGTTGATTCAGACTATT
AGAAGCTTGACAGAGGAGAAGGTACAAATGGCTTTTGAAGTTTCAAGCATGCTACAGGAT
CAAGTTGCTGAAAGGGCTTCTGCTAAGGAAGAAGCCAAACTATTACAGGAAGAATTAGAC
TCACGGACACGGAGATTGGAGACGGAGAAGAATGAATTACAATCAGCACTGGAAAAGGAG
TTGGATAGAAGATCCAGCGAGTGGTCTCTAAAACTTGAGAAATACCAAATTGAAGAACAT
AGACTCCGTGAAAGGGTGAGAGAGCTGGCAGAGCAGAATGTCTCTCTACAAAGGGAAGTC
TCTTCATTTAATGAGAAGGAAGTGGATAATAGAAGCAAGATATCATTTTCAGAGAAACAA
CTTGAAGATTTGTCTAAGAGAATTGAAGAAGTGTCAGAGGAGAATCAAAATCTAAGGCAG
CAGCTTTCTCAGTTACAAGAGGAATATCGAGTAGCTCAAGACGACCGAGAGTATGTCCGG
GAAAACTACCAGGAAAAGGTTAAAGAATGCGAGGACCTGCACAGATCTATTGCTAGATTG
CAACGGACTTGCAATGAACAAGAGAAGACAATTGATGGTCTGCGAGGATTTTGTGAGGAT
GTTGGCAAGAAGACTCCAGCAAACTACGACAACCAGTTGGAGAAGTTGCAAGTAGAGCAA
ATAAGATTGGTAGGTGTGGAACGTGCTCTAAGGAAGGAGGTGGAGTCTTTTCGGATCCAA
ATTGATTCTCTACGCCATGAAAATATTAGCTTGTTGAATCGTTTAAGAGGCAATGGAAAG
GAGGGTGGGTTCTCAACTTTTAAGCTAGATCAGGAATTATGCAATCGTGTTTGCTGCTTG
CAAAATCAGGGGCTTAATTTGCTTAGGGAGAGCAGCCAGCTTTGTGGAAAGTTATTAGAG
TACACAAAAGAAAATGTCAGACAAAATGGGGGAATTGATGGTCAATTCTTAATTGAATGC
AATGTAAAGATCCAGGGTCTTAAGAGGGGAATTGAAACTCTGACAAGCAGCTTGCAGACG
GTGTCATCTGTGATAAATGAGAAGTCCTATCCAGTAAATTCAGATTCTCAGCCATCTAGC
AGGGGTGATGCATTTCACCAGCAAAACAGTCAGAAACCAGACGAAATCAAGCAATCAGAG
CTCAAATCGGAGACTTTGCTGACAGCTGTGTTAAGGGAGAAGCTTTATTCCAAGGAGATG
GATATAGAGCAACTTCAGGCTGATCTGGCAGCAGCAGTTAGAGGTAACGATATCCTCAAA
TGTGAAGTCCAAAATGCGCTGGACACTCTTTCTTGTGCCAAACACAAGTTGAAAGATCTT
GAGCTTCAGATGATAAAAAAGGACGAAAATATCAACCAGCTCCAGAATGATTTGCAAGAA
TGCATGAAGGAACTTAGCCTCATGAAGGGGATACTACCAAAAGTATCTCAGGAAAGAGAT
TTCATGTGGGAGGAAGTTAAGAACTACAGTGAGAAGAACATGTTGTTGAACTCTGAGGTC
AACACGTTGAAAAAGAAGGTAGAGACACTCGATGAAGACATACTTATGAAGGAAGGTCAA
ATCACAATCTTGAAGGACAGCATAGGCAAGCCTTTCGATCTTCTTGCAAGCCCTGATTCT
ACTAGAGAATTTCTGCTGGAGTGA