Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060425
CDS Infomation

pacid=37442020 polypeptide=PGSC0003DMP400040677 locus=PGSC0003DMG400023500 ID=PGSC0003DMT400060425.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAATTGATTTTAGATATGGGTTTCTCTTTTTCTTGATGTTTTTATCAAGTAAT
TGGGTTATTGGAGCTATCAAATCTCAATCAACTGAAGAAGCATATGTTACCCTTTTATAT
GGAGATGAGTTTTTGCTTGGTGTTAGAGTTCTTGGAAAGTCAATTAGGAATACTGGGTCT
ACTAAAGATATGGTTGTTTTGGTCTCTGATGGTGTTTCTCAATATGCTAATGATCTACTA
AGAGCTGATGGTTGGATTGTGGAAAAGATTAGTTTACTGTCAAACCCAAATCAAGTGAGG
CCGAAGAGGTTTTGGGGTGTTTACACAAAGCTAAAAGTATTTAACATGACCAAGTACAAG
AAAGTGGTATATCTTGATGCTGATACTATCGTAGTTAAGAGCATTGAAGATCTATTTAAG
TGTGGGAAGTTTTGTGCAAATTTGAAACATTCCGAGAGACTAAATTCCGGAGTAATGGTG
ATTGAGCCATCGGATGAGGTTTTTAAGGATATGATGAGCAAGGTGACCACTTTGCCTTCT
TACACTGGAGGTGATCAAGGTTTTCTGAACTCCTACTATGCTGGGTTTGCTAATGCGCGT
GTTTATGAACCAAATCAGCCTTTAGATGTCCTAAATTCTAGAAAGGTCCCTGAAATGGAG
AGACTTTCTACTCTTTACAATGCGGATGTTGGCCTTTACATGCTTGCTAACAAGTGGATG
GTTGATGAGAAAGAACTCCGAGTTATTCATTACACACTGGGACCACTTAAACCATGGGAT
TGGTGGACATCTTGGCTGTTAAAACCTGTTGACGTATGGCAGAATGTTAGGGTACGTCTT
CAAGAATCTCTACCTGGAACTGGAGGGGGTAAAAATCCTAGAGATGAACTTCTTGTCAAA
TTTCTGTTTCTGGTTCCATTGCTTCTGATGGTAATTTCTTACTATAAGTCATGTTTACAG
ACACGATCGCTATTTGACCACATTAGACAGCTGTACTACAAGATCAGAGCTGGAGGTGTC
CTAGCTTATTCTTCTGTTCCTTCATCCACCATTCTTTCAGATCAGCAGCCGAAGGTGCCT
GCTTTTCTGGGTGGGATTTCTGTATGTGTCTGTTTTGCTGCTGTTCTGGTGTCTCTTGGG
CTTTCACTTGTAATTATCCCCCGCCAAGTAATGCCGTGGACTGGTCTTCTCCTGATGTAC
GAGTGGACGTTTACACTTCTCTTCCTTCAGTTTGGAAGTTATTTGTACTTAGTTTATCAA
TGGGGAAAAGCTGTGGCAAATCAAGCTGGACAATTTCGGGCAGATTCTACATCTTTGGAC
CATGAATCTGGAAAAGGTCATCAGCGGCAGCAATCATATTGTGACATTGCTGCGTGCTAC
TATGGGTTAGGGATGGCATTTCTCGCAATTTTAGCCCCCGCATTGCCTAGTATTTTCGGA
ATCACTGCTTTGTTTTTGAGGTTAGGTTTGATGGTCGTTGGAGGCCTTGTTTTGTTGTCG
TTCATGACATATGCTGCGGAGCATCTATCGATAAGATCGTTTACGAGGGGATTTGAAGAA
AAAGATATGCACAGGAGTAGAAGTATATGTTTCTTGTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040677
PEP Infomation

pacid=37442020 transcript=PGSC0003DMT400060425 locus=PGSC0003DMG400023500 ID=PGSC0003DMT400060425.v4.03 annot-version=v4.03
Sequence

MKEIDFRYGFLFFLMFLSSNWVIGAIKSQSTEEAYVTLLYGDEFLLGVRVLGKSIRNTGS
TKDMVVLVSDGVSQYANDLLRADGWIVEKISLLSNPNQVRPKRFWGVYTKLKVFNMTKYK
KVVYLDADTIVVKSIEDLFKCGKFCANLKHSERLNSGVMVIEPSDEVFKDMMSKVTTLPS
YTGGDQGFLNSYYAGFANARVYEPNQPLDVLNSRKVPEMERLSTLYNADVGLYMLANKWM
VDEKELRVIHYTLGPLKPWDWWTSWLLKPVDVWQNVRVRLQESLPGTGGGKNPRDELLVK
FLFLVPLLLMVISYYKSCLQTRSLFDHIRQLYYKIRAGGVLAYSSVPSSTILSDQQPKVP
AFLGGISVCVCFAAVLVSLGLSLVIIPRQVMPWTGLLLMYEWTFTLLFLQFGSYLYLVYQ
WGKAVANQAGQFRADSTSLDHESGKGHQRQQSYCDIAACYYGLGMAFLAILAPALPSIFG
ITALFLRLGLMVVGGLVLLSFMTYAAEHLSIRSFTRGFEEKDMHRSRSICFLC*

Transcript Sequence

Transcript ID

PGSC0003DMT400060425
Transcript Infomation

pacid=37442020 locus=PGSC0003DMG400023500 ID=PGSC0003DMT400060425.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAATTGATTTTAGATATGGGTTTCTCTTTTTCTTGATGTTTTTATCAAGTAAT
TGGGTTATTGGAGCTATCAAATCTCAATCAACTGAAGAAGCATATGTTACCCTTTTATAT
GGAGATGAGTTTTTGCTTGGTGTTAGAGTTCTTGGAAAGTCAATTAGGAATACTGGGTCT
ACTAAAGATATGGTTGTTTTGGTCTCTGATGGTGTTTCTCAATATGCTAATGATCTACTA
AGAGCTGATGGTTGGATTGTGGAAAAGATTAGTTTACTGTCAAACCCAAATCAAGTGAGG
CCGAAGAGGTTTTGGGGTGTTTACACAAAGCTAAAAGTATTTAACATGACCAAGTACAAG
AAAGTGGTATATCTTGATGCTGATACTATCGTAGTTAAGAGCATTGAAGATCTATTTAAG
TGTGGGAAGTTTTGTGCAAATTTGAAACATTCCGAGAGACTAAATTCCGGAGTAATGGTG
ATTGAGCCATCGGATGAGGTTTTTAAGGATATGATGAGCAAGGTGACCACTTTGCCTTCT
TACACTGGAGGTGATCAAGGTTTTCTGAACTCCTACTATGCTGGGTTTGCTAATGCGCGT
GTTTATGAACCAAATCAGCCTTTAGATGTCCTAAATTCTAGAAAGGTCCCTGAAATGGAG
AGACTTTCTACTCTTTACAATGCGGATGTTGGCCTTTACATGCTTGCTAACAAGTGGATG
GTTGATGAGAAAGAACTCCGAGTTATTCATTACACACTGGGACCACTTAAACCATGGGAT
TGGTGGACATCTTGGCTGTTAAAACCTGTTGACGTATGGCAGAATGTTAGGGTACGTCTT
CAAGAATCTCTACCTGGAACTGGAGGGGGTAAAAATCCTAGAGATGAACTTCTTGTCAAA
TTTCTGTTTCTGGTTCCATTGCTTCTGATGGTAATTTCTTACTATAAGTCATGTTTACAG
ACACGATCGCTATTTGACCACATTAGACAGCTGTACTACAAGATCAGAGCTGGAGGTGTC
CTAGCTTATTCTTCTGTTCCTTCATCCACCATTCTTTCAGATCAGCAGCCGAAGGTGCCT
GCTTTTCTGGGTGGGATTTCTGTATGTGTCTGTTTTGCTGCTGTTCTGGTGTCTCTTGGG
CTTTCACTTGTAATTATCCCCCGCCAAGTAATGCCGTGGACTGGTCTTCTCCTGATGTAC
GAGTGGACGTTTACACTTCTCTTCCTTCAGTTTGGAAGTTATTTGTACTTAGTTTATCAA
TGGGGAAAAGCTGTGGCAAATCAAGCTGGACAATTTCGGGCAGATTCTACATCTTTGGAC
CATGAATCTGGAAAAGGTCATCAGCGGCAGCAATCATATTGTGACATTGCTGCGTGCTAC
TATGGGTTAGGGATGGCATTTCTCGCAATTTTAGCCCCCGCATTGCCTAGTATTTTCGGA
ATCACTGCTTTGTTTTTGAGGTTAGGTTTGATGGTCGTTGGAGGCCTTGTTTTGTTGTCG
TTCATGACATATGCTGCGGAGCATCTATCGATAAGATCGTTTACGAGGGGATTTGAAGAA
AAAGATATGCACAGGAGTAGAAGTATATGTTTCTTGTGCTGA