Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060408
CDS Infomation

pacid=37442272 polypeptide=PGSC0003DMP400040671 locus=PGSC0003DMG400023497 ID=PGSC0003DMT400060408.v4.03 annot-version=v4.03
Sequence

ATGACGACTAATGTTAGTTTCCAACAAGCACTAACTGTTGAATCTTCAAGTATAGTGAAA
CAAGCTTTGAACTTAGCTAAAAGAAGAGGACATTCACATGTAACTCCTCTTCATGTAGCA
AGTGCAATGTTAGTTTCCTCTTCGTCTACGCTTTTAAGAAAAGCTTGTTTTCAAACAAAT
TCTCATCCAATTCAGTACAAAGCCCTTGAACTTTGCTTCAATGTAGCACTCAATAGGCTT
CCTACCTCTGCATCTAATCCGATTCTCGAGCCTCATGTTCACCCTCCTTTTCTTTCTAAT
GCCTTAGTTGCTGCATTTAAGAGGGCACAAGCCTATCAACGTCGCGGTTCAGTAGAGAAT
CAGCAACAACAACAGCACCTCAAAGTAGAAATTGACCAGCTGGTTATTTCAATTCTTGAT
GATCCTAGTGTTAGCAGAGTTATGAGTGAAGCTGGTTTTTCTAGCATCCAACTAAAAACC
AATGTAGAACACGCTATTTCTTCCGAAAATAGCACAAAACAGATGGTCATAGCATCAGGA
AACAACCTCAAGTTGTCACTATGCAAATCAGGTGATGATCCCAGTGTTAGCCAAGTCATG
AGGGAAGCCGGTTTTTCTAGCATCCAACTAAAAACCAATGTAGAACACGCTATTTCTTCC
GAAAATAGCACAAAACAGATGGTCATAGCATCAGGAAACAACCTCAAGTTGTCACTATGC
AAATCAGGTGATGATCCCAGTGTTAGCCAAGTCATGAGGGAAGCCGGTTTTTCTAGCATC
CAACTAAAAACCAATGTAGAACACGCTATTTCTTCCGAAAATAGCACAAAACAGATGGTC
ATAGCATCAGGAAACAACCTCAAGTTGTCACTATGCAAATCAGGTGATGATCCCAGTGTT
AGCCAAGTCATGAGGGAAGCCGGTTTTTCTAGCATCCAACTAAAAACCAATGTAGAACAC
GCTATTTCTTCGGAGATTTCTTGCAAAAATAGCGCAAAATCGATGGTTCTACCACCAGGA
GATAACCTCAAATTGTCACTAGGCAAATCAAGTGATGATCAAATCAAGAATGATGATGTG
ATGAGTGTTATAGAAACAATGATGAACAAGAAAAGGAGAAACACAGTTATTGTAGCAGAG
TGTTTAGCTAATGCTGAAGGGGTTGTTAGAGGAGTTGTCGATAAGTTCGATAAAGGAGAA
GTATCATCACACATGAAACATGTTCAGTTCATAAGTGTTCCACTTTCTACACTGAGAAAT
GTCTCGAAAGAAGAATTCGATGCCAAGATTAGAGAGCTAAGGATTTTACTAAAAAGCTGT
ATACACAGAGGGGTTGTTTTATATTTAGGTGATCTTGAATGGATATCTGAGTTTTGGACT
AAAGTACACAATGAGCAAAAAAACAACTACATGATATTGGAGCTTAGTCGATTGTTATGT
GGCGAAATGAGTGAAAACGGAAGGCTATGGCTTATGGGAATTGCTAGTTTTCCGACTTAT
ACGAAATGTAAAACTGGCTGTCCTTCTCTACAGACTCTTTGGGATCTTCATCCTCTTACA
CTCCCGGATGTCAGCTTGGATCTCAACCTTAACCTCGAAAGTTCTGTCCACAAGCATGAT
CATAACTTTATAGACAAAGGCTTTTTTAGTCCATCTTCATCATCTCCTTGTTCCTCTACT
TCGATTTCTTCTTCATCGAAGAAAGAACATCAATTCTTGAATACAAAGCCTGAACTTCTA
TCGAATCCCAATTCGATTCCTAATTCAGCTTCATCAAGTGAAGCAAGTGGACATATTGAG
CACTTAGAGCTATGTTGCTCTGACTCTCCAGAAATGTTGTTGCACTCGTGTCAGATCCTT
CAGAAATGCACGCACTCATCAACATTTTTGAACAGTTCGAGCAACGTGAAGATTCTTTGC
AAGGCATTGGAGGAAAAAGTTCCATGGCAAAAAGATATCATTCATGATATAGTAAGCACA
ATTCTTGAACGTAGACACAAAAAGGAAGAAACTTGGCTTTTGTTCTTAGGTGTTGATTCT
CATGGCAAAGAGAAAATTTCAAAAGAGTTAGCTAAAATAATCTTTGGCTCTCAAGATTGT
TTCATTTCCATTGGATTAAGTACATTTTCATCATCAACAAGAACAGATTCAACTGATCAA
GAAGTCAATAACAAAAGATCTCGAGACGAGCAAGGTCGGAGTTATCTCGAGAGATTTACA
AATGCAATTCAAGAAAATCCAAGGAGAGTGTTCTTCATGGAAGATATGGATCAAGTTGAT
TCTTTTTCACAAAAGGGTATTCAAAAAGCTATTGAAAGTGGAAAATTAACACTTCCTAAT
GGTGATTTAGTGTTAATTAAAGATTCTATAATCATTTTCAGCTGTGTAGAGTACTTTAGT
TCAATTTCAAGAACATGTTTTCCTACAAATATTCAGAAATTTAGTGAAGAAAATAATGCT
TCATTGGATTTGAATATTGCCATTGGAGAAAATAGGGATGAAAAACAAATTATGTTCAAG
ATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040671
PEP Infomation

pacid=37442272 transcript=PGSC0003DMT400060408 locus=PGSC0003DMG400023497 ID=PGSC0003DMT400060408.v4.03 annot-version=v4.03
Sequence

MTTNVSFQQALTVESSSIVKQALNLAKRRGHSHVTPLHVASAMLVSSSSTLLRKACFQTN
SHPIQYKALELCFNVALNRLPTSASNPILEPHVHPPFLSNALVAAFKRAQAYQRRGSVEN
QQQQQHLKVEIDQLVISILDDPSVSRVMSEAGFSSIQLKTNVEHAISSENSTKQMVIASG
NNLKLSLCKSGDDPSVSQVMREAGFSSIQLKTNVEHAISSENSTKQMVIASGNNLKLSLC
KSGDDPSVSQVMREAGFSSIQLKTNVEHAISSENSTKQMVIASGNNLKLSLCKSGDDPSV
SQVMREAGFSSIQLKTNVEHAISSEISCKNSAKSMVLPPGDNLKLSLGKSSDDQIKNDDV
MSVIETMMNKKRRNTVIVAECLANAEGVVRGVVDKFDKGEVSSHMKHVQFISVPLSTLRN
VSKEEFDAKIRELRILLKSCIHRGVVLYLGDLEWISEFWTKVHNEQKNNYMILELSRLLC
GEMSENGRLWLMGIASFPTYTKCKTGCPSLQTLWDLHPLTLPDVSLDLNLNLESSVHKHD
HNFIDKGFFSPSSSSPCSSTSISSSSKKEHQFLNTKPELLSNPNSIPNSASSSEASGHIE
HLELCCSDSPEMLLHSCQILQKCTHSSTFLNSSSNVKILCKALEEKVPWQKDIIHDIVST
ILERRHKKEETWLLFLGVDSHGKEKISKELAKIIFGSQDCFISIGLSTFSSSTRTDSTDQ
EVNNKRSRDEQGRSYLERFTNAIQENPRRVFFMEDMDQVDSFSQKGIQKAIESGKLTLPN
GDLVLIKDSIIIFSCVEYFSSISRTCFPTNIQKFSEENNASLDLNIAIGENRDEKQIMFK
I*

Transcript Sequence

Transcript ID

PGSC0003DMT400060408
Transcript Infomation

pacid=37442272 locus=PGSC0003DMG400023497 ID=PGSC0003DMT400060408.v4.03 annot-version=v4.03
Sequence

ATGACGACTAATGTTAGTTTCCAACAAGCACTAACTGTTGAATCTTCAAGTATAGTGAAA
CAAGCTTTGAACTTAGCTAAAAGAAGAGGACATTCACATGTAACTCCTCTTCATGTAGCA
AGTGCAATGTTAGTTTCCTCTTCGTCTACGCTTTTAAGAAAAGCTTGTTTTCAAACAAAT
TCTCATCCAATTCAGTACAAAGCCCTTGAACTTTGCTTCAATGTAGCACTCAATAGGCTT
CCTACCTCTGCATCTAATCCGATTCTCGAGCCTCATGTTCACCCTCCTTTTCTTTCTAAT
GCCTTAGTTGCTGCATTTAAGAGGGCACAAGCCTATCAACGTCGCGGTTCAGTAGAGAAT
CAGCAACAACAACAGCACCTCAAAGTAGAAATTGACCAGCTGGTTATTTCAATTCTTGAT
GATCCTAGTGTTAGCAGAGTTATGAGTGAAGCTGGTTTTTCTAGCATCCAACTAAAAACC
AATGTAGAACACGCTATTTCTTCCGAAAATAGCACAAAACAGATGGTCATAGCATCAGGA
AACAACCTCAAGTTGTCACTATGCAAATCAGGTGATGATCCCAGTGTTAGCCAAGTCATG
AGGGAAGCCGGTTTTTCTAGCATCCAACTAAAAACCAATGTAGAACACGCTATTTCTTCC
GAAAATAGCACAAAACAGATGGTCATAGCATCAGGAAACAACCTCAAGTTGTCACTATGC
AAATCAGGTGATGATCCCAGTGTTAGCCAAGTCATGAGGGAAGCCGGTTTTTCTAGCATC
CAACTAAAAACCAATGTAGAACACGCTATTTCTTCCGAAAATAGCACAAAACAGATGGTC
ATAGCATCAGGAAACAACCTCAAGTTGTCACTATGCAAATCAGGTGATGATCCCAGTGTT
AGCCAAGTCATGAGGGAAGCCGGTTTTTCTAGCATCCAACTAAAAACCAATGTAGAACAC
GCTATTTCTTCGGAGATTTCTTGCAAAAATAGCGCAAAATCGATGGTTCTACCACCAGGA
GATAACCTCAAATTGTCACTAGGCAAATCAAGTGATGATCAAATCAAGAATGATGATGTG
ATGAGTGTTATAGAAACAATGATGAACAAGAAAAGGAGAAACACAGTTATTGTAGCAGAG
TGTTTAGCTAATGCTGAAGGGGTTGTTAGAGGAGTTGTCGATAAGTTCGATAAAGGAGAA
GTATCATCACACATGAAACATGTTCAGTTCATAAGTGTTCCACTTTCTACACTGAGAAAT
GTCTCGAAAGAAGAATTCGATGCCAAGATTAGAGAGCTAAGGATTTTACTAAAAAGCTGT
ATACACAGAGGGGTTGTTTTATATTTAGGTGATCTTGAATGGATATCTGAGTTTTGGACT
AAAGTACACAATGAGCAAAAAAACAACTACATGATATTGGAGCTTAGTCGATTGTTATGT
GGCGAAATGAGTGAAAACGGAAGGCTATGGCTTATGGGAATTGCTAGTTTTCCGACTTAT
ACGAAATGTAAAACTGGCTGTCCTTCTCTACAGACTCTTTGGGATCTTCATCCTCTTACA
CTCCCGGATGTCAGCTTGGATCTCAACCTTAACCTCGAAAGTTCTGTCCACAAGCATGAT
CATAACTTTATAGACAAAGGCTTTTTTAGTCCATCTTCATCATCTCCTTGTTCCTCTACT
TCGATTTCTTCTTCATCGAAGAAAGAACATCAATTCTTGAATACAAAGCCTGAACTTCTA
TCGAATCCCAATTCGATTCCTAATTCAGCTTCATCAAGTGAAGCAAGTGGACATATTGAG
CACTTAGAGCTATGTTGCTCTGACTCTCCAGAAATGTTGTTGCACTCGTGTCAGATCCTT
CAGAAATGCACGCACTCATCAACATTTTTGAACAGTTCGAGCAACGTGAAGATTCTTTGC
AAGGCATTGGAGGAAAAAGTTCCATGGCAAAAAGATATCATTCATGATATAGTAAGCACA
ATTCTTGAACGTAGACACAAAAAGGAAGAAACTTGGCTTTTGTTCTTAGGTGTTGATTCT
CATGGCAAAGAGAAAATTTCAAAAGAGTTAGCTAAAATAATCTTTGGCTCTCAAGATTGT
TTCATTTCCATTGGATTAAGTACATTTTCATCATCAACAAGAACAGATTCAACTGATCAA
GAAGTCAATAACAAAAGATCTCGAGACGAGCAAGGTCGGAGTTATCTCGAGAGATTTACA
AATGCAATTCAAGAAAATCCAAGGAGAGTGTTCTTCATGGAAGATATGGATCAAGTTGAT
TCTTTTTCACAAAAGGGTATTCAAAAAGCTATTGAAAGTGGAAAATTAACACTTCCTAAT
GGTGATTTAGTGTTAATTAAAGATTCTATAATCATTTTCAGCTGTGTAGAGTACTTTAGT
TCAATTTCAAGAACATGTTTTCCTACAAATATTCAGAAATTTAGTGAAGAAAATAATGCT
TCATTGGATTTGAATATTGCCATTGGAGAAAATAGGGATGAAAAACAAATTATGTTCAAG
ATTTGA