Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060400
CDS Infomation

pacid=37442289 polypeptide=PGSC0003DMP400040664 locus=PGSC0003DMG400023493 ID=PGSC0003DMT400060400.v4.03 annot-version=v4.03
Sequence

ATGGCAACATCATCACTTGTTTCTTTGATTTCCAAAAAAATCATCAAACCCTCTATTCAA
ACTCCTCTTCCTCTTAGATCTCACAAACTTTCCTTCCTTGATCAAGTTTTTGATATGTCC
ATTCCTTTTGCATTCTTCTACCCAAAAAAGGGCGGTGACAAGTCGTCTGATGAACCTAGT
CACATGTCTCAACTACTTGAGAGCTCACTTTCCAAAGCACTTTCATACTATTATCCTTAC
GCGGGAAAGATAAAAGATGATTGTATTGTTGATTGTAACGATGTGGGAGTTGAGGTCTCC
AACGTTCGAGTCCATTGTCCCATGTCTGAAATTCTTAAGCACCCTTACACCGATGCTGAA
AATGTAGCTTTTCCACAACGACTACCTTGGAACCACCCGGACCAAGGAAATCTAGCGGTA
GCTCAAGTTAGCTATTTCGATTGTGGTGGAATAGCGGTTGGTGGATGCTTATCACACAAG
ATTGGGGATGCGTGCACTATTAGCAATTTCTTTTATAATTGGGGGATTTTGAGTCGTGAC
AAAAGTGTAATGCCATCTCCTCAGTTTGTAGGAGAATCTATTTACCCCCAATCTAATGAT
CCTTATGTAGTTTCAACTATCAAGCCTGAAGAACCTACGAAATATTTAGGGAAAAGGTTT
GTTTTCCCCGCCGCTAAAGTAAATGCTCTCAAAGCCAAATTTTCGTTTGATTCAGGAGTT
CAGAATCCAACTCGCACTGAAGTTGTGAGCACGCTAATTTACAAATGCGCTCTAGCTGCA
AGAACAAGGAATTTTGGTTCATTTAAACAATCTTCTTTGTTTCAAGTTTCATATATGCGC
GAAAGGCACAACCCACCTCTATCACAAGATGTATCGGGTAATATTGTATCAGGATTTTCT
GTGGAAACAACTAATGAAAGAGACGTAAATTGTCCAAGACTAGTAAGTGAATTGAGGAAT
GAGAAAGAAAAACTTGATCAAGACAAAGCGAAGGCAATAGAAAATGCATTTATCTCAGAA
GTAGTTGATTCAATTGAAAAAGGGAGATCGCCATTCAACAATGACATGTTTGATTATTAT
TTTTGTCTTAGTTTGAATGCGTTCCCCCTTTATAAAACAGACTTTGGTTGGGGGAAGCCA
ACTAGAGTGAGCCTCGCGACGGGTCCCTTCAATAGGTGGTTCCATCTAATGGATAATCAA
AGTGGAGGTGGCATTGAAGCCATAATCATGTTGGGCGAACTAGACATGTTTGTATTTGAA
ACAGATCCGGAGCTTCTAGAGTTTGCCACTCCAATTCCAAATCATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040664
PEP Infomation

pacid=37442289 transcript=PGSC0003DMT400060400 locus=PGSC0003DMG400023493 ID=PGSC0003DMT400060400.v4.03 annot-version=v4.03
Sequence

MATSSLVSLISKKIIKPSIQTPLPLRSHKLSFLDQVFDMSIPFAFFYPKKGGDKSSDEPS
HMSQLLESSLSKALSYYYPYAGKIKDDCIVDCNDVGVEVSNVRVHCPMSEILKHPYTDAE
NVAFPQRLPWNHPDQGNLAVAQVSYFDCGGIAVGGCLSHKIGDACTISNFFYNWGILSRD
KSVMPSPQFVGESIYPQSNDPYVVSTIKPEEPTKYLGKRFVFPAAKVNALKAKFSFDSGV
QNPTRTEVVSTLIYKCALAARTRNFGSFKQSSLFQVSYMRERHNPPLSQDVSGNIVSGFS
VETTNERDVNCPRLVSELRNEKEKLDQDKAKAIENAFISEVVDSIEKGRSPFNNDMFDYY
FCLSLNAFPLYKTDFGWGKPTRVSLATGPFNRWFHLMDNQSGGGIEAIIMLGELDMFVFE
TDPELLEFATPIPNH*

Transcript Sequence

Transcript ID

PGSC0003DMT400060400
Transcript Infomation

pacid=37442289 locus=PGSC0003DMG400023493 ID=PGSC0003DMT400060400.v4.03 annot-version=v4.03
Sequence

ATGGCAACATCATCACTTGTTTCTTTGATTTCCAAAAAAATCATCAAACCCTCTATTCAA
ACTCCTCTTCCTCTTAGATCTCACAAACTTTCCTTCCTTGATCAAGTTTTTGATATGTCC
ATTCCTTTTGCATTCTTCTACCCAAAAAAGGGCGGTGACAAGTCGTCTGATGAACCTAGT
CACATGTCTCAACTACTTGAGAGCTCACTTTCCAAAGCACTTTCATACTATTATCCTTAC
GCGGGAAAGATAAAAGATGATTGTATTGTTGATTGTAACGATGTGGGAGTTGAGGTCTCC
AACGTTCGAGTCCATTGTCCCATGTCTGAAATTCTTAAGCACCCTTACACCGATGCTGAA
AATGTAGCTTTTCCACAACGACTACCTTGGAACCACCCGGACCAAGGAAATCTAGCGGTA
GCTCAAGTTAGCTATTTCGATTGTGGTGGAATAGCGGTTGGTGGATGCTTATCACACAAG
ATTGGGGATGCGTGCACTATTAGCAATTTCTTTTATAATTGGGGGATTTTGAGTCGTGAC
AAAAGTGTAATGCCATCTCCTCAGTTTGTAGGAGAATCTATTTACCCCCAATCTAATGAT
CCTTATGTAGTTTCAACTATCAAGCCTGAAGAACCTACGAAATATTTAGGGAAAAGGTTT
GTTTTCCCCGCCGCTAAAGTAAATGCTCTCAAAGCCAAATTTTCGTTTGATTCAGGAGTT
CAGAATCCAACTCGCACTGAAGTTGTGAGCACGCTAATTTACAAATGCGCTCTAGCTGCA
AGAACAAGGAATTTTGGTTCATTTAAACAATCTTCTTTGTTTCAAGTTTCATATATGCGC
GAAAGGCACAACCCACCTCTATCACAAGATGTATCGGGTAATATTGTATCAGGATTTTCT
GTGGAAACAACTAATGAAAGAGACGTAAATTGTCCAAGACTAGTAAGTGAATTGAGGAAT
GAGAAAGAAAAACTTGATCAAGACAAAGCGAAGGCAATAGAAAATGCATTTATCTCAGAA
GTAGTTGATTCAATTGAAAAAGGGAGATCGCCATTCAACAATGACATGTTTGATTATTAT
TTTTGTCTTAGTTTGAATGCGTTCCCCCTTTATAAAACAGACTTTGGTTGGGGGAAGCCA
ACTAGAGTGAGCCTCGCGACGGGTCCCTTCAATAGGTGGTTCCATCTAATGGATAATCAA
AGTGGAGGTGGCATTGAAGCCATAATCATGTTGGGCGAACTAGACATGTTTGTATTTGAA
ACAGATCCGGAGCTTCTAGAGTTTGCCACTCCAATTCCAAATCATTAG