Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060389
CDS Infomation

pacid=37443182 polypeptide=PGSC0003DMP400040656 locus=PGSC0003DMG400023487 ID=PGSC0003DMT400060389.v4.03 annot-version=v4.03
Sequence

ATGACAAGTAATGGGAAACAAGATCAAGATCAGAGGAAAATTGTTGGCATGGAAGATTCT
AGCATGACAATTGAATTTCTCCGAGCACGATTATTGGCTGAAAGGTCTGTCTCACAAACA
GCAAGGCAGAGAGCTGATGAACTAGCTGAGAGGGTCTTGGAACTGGAAGATCAGCTAAAG
ATTGTGTCACTACAAAGAAAGAAGGCTGAGAAGGCCACAGCAGCTGTTCTATCCATCTTA
GAGAACGAAGGAATATCTGATGCTTCGGAGGAATTTGATTCAGGCTCTGATCAGGAAGCA
ATATTCTCTAATTCTAAAGGTGCTGACTCCACTGACAACAGAAATGAGCGTAAGCCAAAT
CCATCAAATGTGAAAGAAAGAGAAAATGATGCAGACATCTCAAGCTCCGAGATTATATCT
TCTCCATCAACTGGCAGAAGTTTGTCGTGGAAAAGTGGTAAACATTCTTTGCCATCTTTT
GAGAGGAACAGATATACTGATTCTGCCTGGAGGAGGTCTGGTAGTTTCGCGTCAACTGGG
TCTTCTTCGCCAAAACGGGCTGGAAAATCATGCCGACGGATAAGGCGCAATACCACCAAA
ACGGCCACTGATGAATGCCCCCCCGAGCATCTTCCTTCTTTTGCTAATAATGGGCATCAA
TCCTTAATGGACAGTGCTGGCAATAATGATGTGAAAGATCAACGTCACTTACCTACTTCA
GAAATGTCAGAAAATCAAAGGAAATCAGATGAGAGTGATGAAGGCATGGAAAGAGCTTTG
CAGCATAAGGCACAGCTTATAGGGCAATATGAAGCTGAGGAAAAAGCCCAAAGAGAATGG
GAAGAAAAGTATAGAGAGAATAACAACTATGCACAGGATTCATGTGACCCCGGGAATTAC
TCGGATGTGACTGAAGAAAGAGATGACATGAAAGCATTTGAGCAACCATATTCTGCTGAA
ATGATTAATTTGCATAATCATGCAAACAAATTCCAGGAAGTTGATATTCCCTCCACGAAT
GGAGTTACAGACAATGTTCCATCCACTCCGCATATCGGTACAAGCTGCAGGAAGGATCAG
AACTGCAGCAGAATTATTAATTCTGAGTCCCCAGCATCAGAATTTGCACTTTCAAAGTCT
AATGGGAGTTGTCCAGAAAATGATGGCCCGACACCTGCTTATAGTCGCCATCAGTTACCG
TCTGCTAATGGTTCCCCTATACACCCCTTGGAGAATAGTATCTCGTCTTCTGGAGGTAGC
AGTTTGCAAGCAGGACAAGCCTTGGTTTCTAGGGATGCTTCAGATAACATAGGTTCTATC
CTGGGAGCACTTGAACAAGCTAAATTTTCGATTAGCCAACAGATCAACGTCTCGCCAATA
GCAGAAGGTGGATCGTCCATAGAACATTCTATTCCTACTGCTAGAATTGACAGATTAGAC
ATTCTTCCTGGATTCCCTGGCCTTTTTAGACTACCAACGGATTTTCAACTTGAAGCAACT
ACAACAGCCAGCTATCAAGGTTTTCCGTCAAGGTTCAGTTCAGCGAATCATTTTCATGAA
CCTGGCTATGATCAATTCTCAACTACTCCTTACATGGAGTCTCCATCAAATGCTATTACA
GGTCTACCATATACCACTGGATTCGACTACCTTAATCCTCCCTCGGGTTTTGGTCATCCA
TTTTCTAGTAAATCAACCTACCCCACATATCCTTTTCGTCCCAATACAACAACTACTGTG
TCTCAATCCCAAGCAAGTTGGAGTCCGCTATATGAATCCTCACTAACCACATTAAGCCCT
GTTGTAGTGCCAAACTTGTCCTCAGGCGAAGAAGTATTCTTAAGATCCCTTCCGAGGAAT
GAGACAGGTAAACCCCCATCATTTCCTGTCTCACATTATGATGCTCATCTGAGACCAAAC
ATGTATAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400040656
PEP Infomation

pacid=37443182 transcript=PGSC0003DMT400060389 locus=PGSC0003DMG400023487 ID=PGSC0003DMT400060389.v4.03 annot-version=v4.03
Sequence

MTSNGKQDQDQRKIVGMEDSSMTIEFLRARLLAERSVSQTARQRADELAERVLELEDQLK
IVSLQRKKAEKATAAVLSILENEGISDASEEFDSGSDQEAIFSNSKGADSTDNRNERKPN
PSNVKERENDADISSSEIISSPSTGRSLSWKSGKHSLPSFERNRYTDSAWRRSGSFASTG
SSSPKRAGKSCRRIRRNTTKTATDECPPEHLPSFANNGHQSLMDSAGNNDVKDQRHLPTS
EMSENQRKSDESDEGMERALQHKAQLIGQYEAEEKAQREWEEKYRENNNYAQDSCDPGNY
SDVTEERDDMKAFEQPYSAEMINLHNHANKFQEVDIPSTNGVTDNVPSTPHIGTSCRKDQ
NCSRIINSESPASEFALSKSNGSCPENDGPTPAYSRHQLPSANGSPIHPLENSISSSGGS
SLQAGQALVSRDASDNIGSILGALEQAKFSISQQINVSPIAEGGSSIEHSIPTARIDRLD
ILPGFPGLFRLPTDFQLEATTTASYQGFPSRFSSANHFHEPGYDQFSTTPYMESPSNAIT
GLPYTTGFDYLNPPSGFGHPFSSKSTYPTYPFRPNTTTTVSQSQASWSPLYESSLTTLSP
VVVPNLSSGEEVFLRSLPRNETGKPPSFPVSHYDAHLRPNMYR*

Transcript Sequence

Transcript ID

PGSC0003DMT400060389
Transcript Infomation

pacid=37443182 locus=PGSC0003DMG400023487 ID=PGSC0003DMT400060389.v4.03 annot-version=v4.03
Sequence

ATGACAAGTAATGGGAAACAAGATCAAGATCAGAGGAAAATTGTTGGCATGGAAGATTCT
AGCATGACAATTGAATTTCTCCGAGCACGATTATTGGCTGAAAGGTCTGTCTCACAAACA
GCAAGGCAGAGAGCTGATGAACTAGCTGAGAGGGTCTTGGAACTGGAAGATCAGCTAAAG
ATTGTGTCACTACAAAGAAAGAAGGCTGAGAAGGCCACAGCAGCTGTTCTATCCATCTTA
GAGAACGAAGGAATATCTGATGCTTCGGAGGAATTTGATTCAGGCTCTGATCAGGAAGCA
ATATTCTCTAATTCTAAAGGTGCTGACTCCACTGACAACAGAAATGAGCGTAAGCCAAAT
CCATCAAATGTGAAAGAAAGAGAAAATGATGCAGACATCTCAAGCTCCGAGATTATATCT
TCTCCATCAACTGGCAGAAGTTTGTCGTGGAAAAGTGGTAAACATTCTTTGCCATCTTTT
GAGAGGAACAGATATACTGATTCTGCCTGGAGGAGGTCTGGTAGTTTCGCGTCAACTGGG
TCTTCTTCGCCAAAACGGGCTGGAAAATCATGCCGACGGATAAGGCGCAATACCACCAAA
ACGGCCACTGATGAATGCCCCCCCGAGCATCTTCCTTCTTTTGCTAATAATGGGCATCAA
TCCTTAATGGACAGTGCTGGCAATAATGATGTGAAAGATCAACGTCACTTACCTACTTCA
GAAATGTCAGAAAATCAAAGGAAATCAGATGAGAGTGATGAAGGCATGGAAAGAGCTTTG
CAGCATAAGGCACAGCTTATAGGGCAATATGAAGCTGAGGAAAAAGCCCAAAGAGAATGG
GAAGAAAAGTATAGAGAGAATAACAACTATGCACAGGATTCATGTGACCCCGGGAATTAC
TCGGATGTGACTGAAGAAAGAGATGACATGAAAGCATTTGAGCAACCATATTCTGCTGAA
ATGATTAATTTGCATAATCATGCAAACAAATTCCAGGAAGTTGATATTCCCTCCACGAAT
GGAGTTACAGACAATGTTCCATCCACTCCGCATATCGGTACAAGCTGCAGGAAGGATCAG
AACTGCAGCAGAATTATTAATTCTGAGTCCCCAGCATCAGAATTTGCACTTTCAAAGTCT
AATGGGAGTTGTCCAGAAAATGATGGCCCGACACCTGCTTATAGTCGCCATCAGTTACCG
TCTGCTAATGGTTCCCCTATACACCCCTTGGAGAATAGTATCTCGTCTTCTGGAGGTAGC
AGTTTGCAAGCAGGACAAGCCTTGGTTTCTAGGGATGCTTCAGATAACATAGGTTCTATC
CTGGGAGCACTTGAACAAGCTAAATTTTCGATTAGCCAACAGATCAACGTCTCGCCAATA
GCAGAAGGTGGATCGTCCATAGAACATTCTATTCCTACTGCTAGAATTGACAGATTAGAC
ATTCTTCCTGGATTCCCTGGCCTTTTTAGACTACCAACGGATTTTCAACTTGAAGCAACT
ACAACAGCCAGCTATCAAGGTTTTCCGTCAAGGTTCAGTTCAGCGAATCATTTTCATGAA
CCTGGCTATGATCAATTCTCAACTACTCCTTACATGGAGTCTCCATCAAATGCTATTACA
GGTCTACCATATACCACTGGATTCGACTACCTTAATCCTCCCTCGGGTTTTGGTCATCCA
TTTTCTAGTAAATCAACCTACCCCACATATCCTTTTCGTCCCAATACAACAACTACTGTG
TCTCAATCCCAAGCAAGTTGGAGTCCGCTATATGAATCCTCACTAACCACATTAAGCCCT
GTTGTAGTGCCAAACTTGTCCTCAGGCGAAGAAGTATTCTTAAGATCCCTTCCGAGGAAT
GAGACAGGTAAACCCCCATCATTTCCTGTCTCACATTATGATGCTCATCTGAGACCAAAC
ATGTATAGATAG