Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060365
CDS Infomation

pacid=37442861 polypeptide=PGSC0003DMP400040640 locus=PGSC0003DMG400023479 ID=PGSC0003DMT400060365.v4.03 annot-version=v4.03
Sequence

ATGAATAGAAGACGAGGTAGATCAGGCAGTAAACTGTCTTTAGATGAGGTATCCAGTGAT
TTTCTCGGTAATACCAATGAAGAACAGTCTGCATTGGTTTCTTCATCTTCTTCAGGTAAA
GTTAGCAAAACCCAAGTGAAAAGTTCTGATTCTGCTAATAGAAATGTTAATTCTAAAGTG
GTTAGAAGTAGGAAGTCGAGAAAGGAAGTTGTTTCGGATGAGGCTATTTGTATAAACAAA
GAGTCAAATTCTGAGGCTTTAGTTGCGTTAACGGCTGGATTTCCGTCTGACTCATTAAAG
GATGAAGAAATTGAAGCTGGGGTTGTTAGTGTAGTTGGCGGGATAGAACAATGTAACTAT
ATTTTAATTAGGAATCACATTATTACGAAATGGCGTGAAAATGTGTCGATTTGGCTGACG
AAGGATATGTTTGTTGATATTATACCTGAAGGATGTAGTGGGTTATTAGATTCTGCATAT
AACTACTTGTTATCGTACGGGTATGTTAATTTTGGGGTGGCGTTGGCAATTAAGGACAAG
ATTCCAACTAGGCCAAGTAAGGGAAGAGTGATTGTTATTGGGGCAGGTCTTGCTGGGTTG
GCGGCTGCAAGGCAACTGATGTTGTTTGGATTTGAGGTAATTGTTTTAGAGGGACGGAAG
CGTGCAGGTGGAAGGGTGTATACGAAAAAGATGGAAGGAGGGAATAAGGTAGCAACTGCT
GATTTAGGAGGGAGTGTTTTGACAGGTACATTAGGGAATCCACTTGGTCTGTTGGCTCGA
CAGTTGTCGTATACACTTCATACGGTGAGCGACCAATGTCCACTCTATCGTGCTGACGGA
AAGCCCGTAGACGAGTATTTGGATAAAAAAGTGGAGGTTGCTTATAATGAACTTTTGGAC
AAGGCAAGCAAGGTCAGACAAGAATTATCTCCGATTATTTCTCTTGGAGAGGCATTGGAG
ACTTTGCGAAAGGATTTTAGTGTTGCGATGAATGATGAGGAGATGAACTTGTTTAATTGG
CATCTGGTGAATCTGGAATATGCAAATGCAGGTTTGCTTTCACAACTTTCCTTAGCATTT
TGGGACCAAGATGACCCCTATGATATGGGAGGGGATCACTGCTTCTTGCCCGGTGAAAAT
GGAAGATTAGTTCATGCCCTGGCTGAAAATGTGCCTATTATGTTTGAAAAAACTGTGTAT
GCCATTCGTTATGGTAGAGATAGTGTGAAGGTGATTACTGCGGACCAATTATTTGAGAGA
GATATGGCATTGTGCACAGTTCCTCTCGGAGTTTTGAAGAGTGGTTCTATCACGTTCATT
CCAGAGTTGCCTCAGCAAAAACTTGACACAATAAAAAGATTGGGGTTTGGACTGTTAAAT
AAGGTTGCATTGATATTCCCGTATGTGTTTTGGGACTCCAATATTGATACATTTGGTCAT
GTTGCTGATGATTCTAGTTCTCAGGCTGATGGAAATCCTGTAGACGAGCATTTGGATAAA
AAAGTGGTACTTCCGGATAAGGCAAGCTCAGGCAAGAAGTTTTCTCAGGACTGGAAGCAT
AGATCCATATCGTCATTACAAGAATATTCAAACTTGGAGGAAGTGAGATCCCTTACCACA
AACCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040640
PEP Infomation

pacid=37442861 transcript=PGSC0003DMT400060365 locus=PGSC0003DMG400023479 ID=PGSC0003DMT400060365.v4.03 annot-version=v4.03
Sequence

MNRRRGRSGSKLSLDEVSSDFLGNTNEEQSALVSSSSSGKVSKTQVKSSDSANRNVNSKV
VRSRKSRKEVVSDEAICINKESNSEALVALTAGFPSDSLKDEEIEAGVVSVVGGIEQCNY
ILIRNHIITKWRENVSIWLTKDMFVDIIPEGCSGLLDSAYNYLLSYGYVNFGVALAIKDK
IPTRPSKGRVIVIGAGLAGLAAARQLMLFGFEVIVLEGRKRAGGRVYTKKMEGGNKVATA
DLGGSVLTGTLGNPLGLLARQLSYTLHTVSDQCPLYRADGKPVDEYLDKKVEVAYNELLD
KASKVRQELSPIISLGEALETLRKDFSVAMNDEEMNLFNWHLVNLEYANAGLLSQLSLAF
WDQDDPYDMGGDHCFLPGENGRLVHALAENVPIMFEKTVYAIRYGRDSVKVITADQLFER
DMALCTVPLGVLKSGSITFIPELPQQKLDTIKRLGFGLLNKVALIFPYVFWDSNIDTFGH
VADDSSSQADGNPVDEHLDKKVVLPDKASSGKKFSQDWKHRSISSLQEYSNLEEVRSLTT
NQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400060365
Transcript Infomation

pacid=37442861 locus=PGSC0003DMG400023479 ID=PGSC0003DMT400060365.v4.03 annot-version=v4.03
Sequence

ATGAATAGAAGACGAGGTAGATCAGGCAGTAAACTGTCTTTAGATGAGGTATCCAGTGAT
TTTCTCGGTAATACCAATGAAGAACAGTCTGCATTGGTTTCTTCATCTTCTTCAGGTAAA
GTTAGCAAAACCCAAGTGAAAAGTTCTGATTCTGCTAATAGAAATGTTAATTCTAAAGTG
GTTAGAAGTAGGAAGTCGAGAAAGGAAGTTGTTTCGGATGAGGCTATTTGTATAAACAAA
GAGTCAAATTCTGAGGCTTTAGTTGCGTTAACGGCTGGATTTCCGTCTGACTCATTAAAG
GATGAAGAAATTGAAGCTGGGGTTGTTAGTGTAGTTGGCGGGATAGAACAATGTAACTAT
ATTTTAATTAGGAATCACATTATTACGAAATGGCGTGAAAATGTGTCGATTTGGCTGACG
AAGGATATGTTTGTTGATATTATACCTGAAGGATGTAGTGGGTTATTAGATTCTGCATAT
AACTACTTGTTATCGTACGGGTATGTTAATTTTGGGGTGGCGTTGGCAATTAAGGACAAG
ATTCCAACTAGGCCAAGTAAGGGAAGAGTGATTGTTATTGGGGCAGGTCTTGCTGGGTTG
GCGGCTGCAAGGCAACTGATGTTGTTTGGATTTGAGGTAATTGTTTTAGAGGGACGGAAG
CGTGCAGGTGGAAGGGTGTATACGAAAAAGATGGAAGGAGGGAATAAGGTAGCAACTGCT
GATTTAGGAGGGAGTGTTTTGACAGGTACATTAGGGAATCCACTTGGTCTGTTGGCTCGA
CAGTTGTCGTATACACTTCATACGGTGAGCGACCAATGTCCACTCTATCGTGCTGACGGA
AAGCCCGTAGACGAGTATTTGGATAAAAAAGTGGAGGTTGCTTATAATGAACTTTTGGAC
AAGGCAAGCAAGGTCAGACAAGAATTATCTCCGATTATTTCTCTTGGAGAGGCATTGGAG
ACTTTGCGAAAGGATTTTAGTGTTGCGATGAATGATGAGGAGATGAACTTGTTTAATTGG
CATCTGGTGAATCTGGAATATGCAAATGCAGGTTTGCTTTCACAACTTTCCTTAGCATTT
TGGGACCAAGATGACCCCTATGATATGGGAGGGGATCACTGCTTCTTGCCCGGTGAAAAT
GGAAGATTAGTTCATGCCCTGGCTGAAAATGTGCCTATTATGTTTGAAAAAACTGTGTAT
GCCATTCGTTATGGTAGAGATAGTGTGAAGGTGATTACTGCGGACCAATTATTTGAGAGA
GATATGGCATTGTGCACAGTTCCTCTCGGAGTTTTGAAGAGTGGTTCTATCACGTTCATT
CCAGAGTTGCCTCAGCAAAAACTTGACACAATAAAAAGATTGGGGTTTGGACTGTTAAAT
AAGGTTGCATTGATATTCCCGTATGTGTTTTGGGACTCCAATATTGATACATTTGGTCAT
GTTGCTGATGATTCTAGTTCTCAGGCTGATGGAAATCCTGTAGACGAGCATTTGGATAAA
AAAGTGGTACTTCCGGATAAGGCAAGCTCAGGCAAGAAGTTTTCTCAGGACTGGAAGCAT
AGATCCATATCGTCATTACAAGAATATTCAAACTTGGAGGAAGTGAGATCCCTTACCACA
AACCAGTAG