Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060352
CDS Infomation

pacid=37442264 polypeptide=PGSC0003DMP400040628 locus=PGSC0003DMG400023476 ID=PGSC0003DMT400060352.v4.03 annot-version=v4.03
Sequence

ATGAATAAACAAATAATAAGTTTTGTTCTTCTTTTGCTCTTTTCATGTTTGGTACATGGA
GAAGATCCTTATCTTACTTTCGAGTGGAAAGTTACTTATGGAACTATTTCACCTCTAGGT
GTACCACAACAAGTCATTTTAATCAATGGTCAATTCCCTGGACCTAAAATTAATTGTACA
TCAAACAACAACATTGTTGTAAATGTAATCAATCAATTAGATGAACCATTCCTTATAACA
TGGAAAGGGATTCAACAAAGGAAGAATTCATGGCAAGATGGTACATTGGGGACAAATTGT
CCTATCCCTCCTGGTAAAAATTTCACCTATCATTTCCAGGTTAAGGATCAGATCGGTAGC
TATTACTATCACCCTACAACCGCGCTACATAGGGCAGTTGGAGGGTATGGTCCTATAACT
ATATATAGTCGCGCATTGATCCCTGTCCCATTTGATACACCGGCTGATGATTTCACCGTT
CTTGTGAGTGATTGGTATACTAATAGTCATAAATCATTGAAAGGTCTTTTAGACACGGGG
CGTTCACTAGGAAGGCCAGATGGGATTGTTATAAATGGTAAAAGCGGAAAAGGTGATGGT
AAAGATGAGCCTATGTTTACAATGGTTAAAGGAAAGACATATAGGTTTAGGTTTTGTAAC
GTGGGTATGAAGGATACAATCAATGTTCGAATTCAAGGACATACAATGAAACTTGTTGAG
ATGGAAGGATCTCACACTGTTCAAAATTTGTATGAGTTGTTGGATATTCATTTGGGACAA
TGCTTATCTGTCTTGATTACTGCTGATCAAAACCCTAAGGACTATTTCATTGTTGCTACT
TCACGTTTTACTAAGGAATCTCGTGTCGCGACCGCCACCATCCGTTATGCCAACGGTAAA
GGTCCCGCCTCTCCTCTTGAAAAGAAAGAAGCTCCGGAAGGATGGGAGTGGTCACTCAAC
CAATTCAACTCATTCCGTTGGAATTTGACCGCGAGTTCAGCTAGACCTAACCCTCAAGGT
AGTTACCATTACGGTCAAATCAACATCACACGAACCATTAGGTTGGTGAGCACCGCCGGT
GTTGTGAACGGGAAACACCGTTACGCCATCAACGGTGTCTCGCACACGGATCCCGAGACA
CCAATTAAGTTGGCTCAATACTATGGTGTTGCGGACAAGGTGTTCAAATATGGACTATGT
AAGGATGAGTATATACCACCAAGTGGAAATGAAGTAATCACAATTGCACCTAATGTGGTT
AATGTTACATATCGCAATTTTGTTGAAATTATACTTGAAAATCATGAGAAGAGTGTTCAA
TCTTGGCATTTGGATGGATTCAACTTCTTTGCTGTTGCGATTGCACCGGGGAGATGGAAG
CCAGAGATGAGACAAAACTACAACTTACTTGATGCTGTGAGTAGGAGCACAATCCAAGTG
TACCCAAATTCATGGGCTGCAATTATAACAACTCTTGACAATGCTGGGCTTTGGAATTTA
AGATCCAATGCACTTGAAAAACAATATTTGGGCCATCAACTCTATTTTAGTGTTAATGCA
CCAAACACATCTTTGAAAGATGAGTACAACATGCCTGATAATGATATATCGTGTGGAATC
ATCAAGGATTTGCCTCATCCAAAACCTTACTCCATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400040628
PEP Infomation

pacid=37442264 transcript=PGSC0003DMT400060352 locus=PGSC0003DMG400023476 ID=PGSC0003DMT400060352.v4.03 annot-version=v4.03
Sequence

MNKQIISFVLLLLFSCLVHGEDPYLTFEWKVTYGTISPLGVPQQVILINGQFPGPKINCT
SNNNIVVNVINQLDEPFLITWKGIQQRKNSWQDGTLGTNCPIPPGKNFTYHFQVKDQIGS
YYYHPTTALHRAVGGYGPITIYSRALIPVPFDTPADDFTVLVSDWYTNSHKSLKGLLDTG
RSLGRPDGIVINGKSGKGDGKDEPMFTMVKGKTYRFRFCNVGMKDTINVRIQGHTMKLVE
MEGSHTVQNLYELLDIHLGQCLSVLITADQNPKDYFIVATSRFTKESRVATATIRYANGK
GPASPLEKKEAPEGWEWSLNQFNSFRWNLTASSARPNPQGSYHYGQINITRTIRLVSTAG
VVNGKHRYAINGVSHTDPETPIKLAQYYGVADKVFKYGLCKDEYIPPSGNEVITIAPNVV
NVTYRNFVEIILENHEKSVQSWHLDGFNFFAVAIAPGRWKPEMRQNYNLLDAVSRSTIQV
YPNSWAAIITTLDNAGLWNLRSNALEKQYLGHQLYFSVNAPNTSLKDEYNMPDNDISCGI
IKDLPHPKPYSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400060352
Transcript Infomation

pacid=37442264 locus=PGSC0003DMG400023476 ID=PGSC0003DMT400060352.v4.03 annot-version=v4.03
Sequence

ATGAATAAACAAATAATAAGTTTTGTTCTTCTTTTGCTCTTTTCATGTTTGGTACATGGA
GAAGATCCTTATCTTACTTTCGAGTGGAAAGTTACTTATGGAACTATTTCACCTCTAGGT
GTACCACAACAAGTCATTTTAATCAATGGTCAATTCCCTGGACCTAAAATTAATTGTACA
TCAAACAACAACATTGTTGTAAATGTAATCAATCAATTAGATGAACCATTCCTTATAACA
TGGAAAGGGATTCAACAAAGGAAGAATTCATGGCAAGATGGTACATTGGGGACAAATTGT
CCTATCCCTCCTGGTAAAAATTTCACCTATCATTTCCAGGTTAAGGATCAGATCGGTAGC
TATTACTATCACCCTACAACCGCGCTACATAGGGCAGTTGGAGGGTATGGTCCTATAACT
ATATATAGTCGCGCATTGATCCCTGTCCCATTTGATACACCGGCTGATGATTTCACCGTT
CTTGTGAGTGATTGGTATACTAATAGTCATAAATCATTGAAAGGTCTTTTAGACACGGGG
CGTTCACTAGGAAGGCCAGATGGGATTGTTATAAATGGTAAAAGCGGAAAAGGTGATGGT
AAAGATGAGCCTATGTTTACAATGGTTAAAGGAAAGACATATAGGTTTAGGTTTTGTAAC
GTGGGTATGAAGGATACAATCAATGTTCGAATTCAAGGACATACAATGAAACTTGTTGAG
ATGGAAGGATCTCACACTGTTCAAAATTTGTATGAGTTGTTGGATATTCATTTGGGACAA
TGCTTATCTGTCTTGATTACTGCTGATCAAAACCCTAAGGACTATTTCATTGTTGCTACT
TCACGTTTTACTAAGGAATCTCGTGTCGCGACCGCCACCATCCGTTATGCCAACGGTAAA
GGTCCCGCCTCTCCTCTTGAAAAGAAAGAAGCTCCGGAAGGATGGGAGTGGTCACTCAAC
CAATTCAACTCATTCCGTTGGAATTTGACCGCGAGTTCAGCTAGACCTAACCCTCAAGGT
AGTTACCATTACGGTCAAATCAACATCACACGAACCATTAGGTTGGTGAGCACCGCCGGT
GTTGTGAACGGGAAACACCGTTACGCCATCAACGGTGTCTCGCACACGGATCCCGAGACA
CCAATTAAGTTGGCTCAATACTATGGTGTTGCGGACAAGGTGTTCAAATATGGACTATGT
AAGGATGAGTATATACCACCAAGTGGAAATGAAGTAATCACAATTGCACCTAATGTGGTT
AATGTTACATATCGCAATTTTGTTGAAATTATACTTGAAAATCATGAGAAGAGTGTTCAA
TCTTGGCATTTGGATGGATTCAACTTCTTTGCTGTTGCGATTGCACCGGGGAGATGGAAG
CCAGAGATGAGACAAAACTACAACTTACTTGATGCTGTGAGTAGGAGCACAATCCAAGTG
TACCCAAATTCATGGGCTGCAATTATAACAACTCTTGACAATGCTGGGCTTTGGAATTTA
AGATCCAATGCACTTGAAAAACAATATTTGGGCCATCAACTCTATTTTAGTGTTAATGCA
CCAAACACATCTTTGAAAGATGAGTACAACATGCCTGATAATGATATATCGTGTGGAATC
ATCAAGGATTTGCCTCATCCAAAACCTTACTCCATATAA