Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060330
CDS Infomation

pacid=37443453 polypeptide=PGSC0003DMP400040611 locus=PGSC0003DMG400023469 ID=PGSC0003DMT400060330.v4.03 annot-version=v4.03
Sequence

ATGAATTCAGCTACTACAATGTCAGCATCAGTTTTAAACTACCAAATCTTGAAATTTTTC
CCACCCCAGAAAAATGGGTTCTTGAAATCTCCATTGATTAGAGGAAAAATTTGCAGATTT
TGTGTTTCTGCAAGTTCAAATGAGTTGAATAAACAAGTAATTGAAGACCCAAAAGAGGAA
ACTCAAGAAAAGAGTGATGGGGTTATTGTTAATAGTACTGAGGAGGAGGAAGAAAGAAGT
GGGGAAAATTCTACTTCTACTGGTCCTAGTACTGTTCTTGATAATAAGGAACTAAAAAAG
GCTGTCCTAAAGACTGCTTCAACCTTTGCACCAAGGGCTTCCACTGCTACGAAAAACCCT
GCGAAACCTGGAACTGTTTTATACACTGTTTTTGAAGTGCAAGCTTATGCTTCAATGTTG
ATAGGTGGAGCTTTGTCCTTCAATCTCATATTTCCATCAACTGAACCTGACATCTGGAGA
CTAATGGGAATGTGGTCCATATGGATGTTTACTATACCTTCCCTTCGGGCTCGAGACTGC
TCGAAGGATGAGAAAGAAGCTCTCAATTATCTTTTTCTCCTCGTTCCCTTGCTTAATGTT
GCAATCCCGTTCTTCTTGAAGTCATTTGCTGTCGTTTGGTCAGCAGATACTGTAGCATTT
CTGGGGATGTATGCTTGGAAGCTCGGATGGCTACAGAAAGAGCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400040611
PEP Infomation

pacid=37443453 transcript=PGSC0003DMT400060330 locus=PGSC0003DMG400023469 ID=PGSC0003DMT400060330.v4.03 annot-version=v4.03
Sequence

MNSATTMSASVLNYQILKFFPPQKNGFLKSPLIRGKICRFCVSASSNELNKQVIEDPKEE
TQEKSDGVIVNSTEEEEERSGENSTSTGPSTVLDNKELKKAVLKTASTFAPRASTATKNP
AKPGTVLYTVFEVQAYASMLIGGALSFNLIFPSTEPDIWRLMGMWSIWMFTIPSLRARDC
SKDEKEALNYLFLLVPLLNVAIPFFLKSFAVVWSADTVAFLGMYAWKLGWLQKER*

Transcript Sequence

Transcript ID

PGSC0003DMT400060330
Transcript Infomation

pacid=37443453 locus=PGSC0003DMG400023469 ID=PGSC0003DMT400060330.v4.03 annot-version=v4.03
Sequence

ATGAATTCAGCTACTACAATGTCAGCATCAGTTTTAAACTACCAAATCTTGAAATTTTTC
CCACCCCAGAAAAATGGGTTCTTGAAATCTCCATTGATTAGAGGAAAAATTTGCAGATTT
TGTGTTTCTGCAAGTTCAAATGAGTTGAATAAACAAGTAATTGAAGACCCAAAAGAGGAA
ACTCAAGAAAAGAGTGATGGGGTTATTGTTAATAGTACTGAGGAGGAGGAAGAAAGAAGT
GGGGAAAATTCTACTTCTACTGGTCCTAGTACTGTTCTTGATAATAAGGAACTAAAAAAG
GCTGTCCTAAAGACTGCTTCAACCTTTGCACCAAGGGCTTCCACTGCTACGAAAAACCCT
GCGAAACCTGGAACTGTTTTATACACTGTTTTTGAAGTGCAAGCTTATGCTTCAATGTTG
ATAGGTGGAGCTTTGTCCTTCAATCTCATATTTCCATCAACTGAACCTGACATCTGGAGA
CTAATGGGAATGTGGTCCATATGGATGTTTACTATACCTTCCCTTCGGGCTCGAGACTGC
TCGAAGGATGAGAAAGAAGCTCTCAATTATCTTTTTCTCCTCGTTCCCTTGCTTAATGTT
GCAATCCCGTTCTTCTTGAAGTCATTTGCTGTCGTTTGGTCAGCAGATACTGTAGCATTT
CTGGGGATGTATGCTTGGAAGCTCGGATGGCTACAGAAAGAGCGATGA