Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060325
CDS Infomation

pacid=37444018 polypeptide=PGSC0003DMP400040606 locus=PGSC0003DMG400023467 ID=PGSC0003DMT400060325.v4.03 annot-version=v4.03
Sequence

ATGAACATGCACCGTGCATTAGGTATTCAAAGATCTAGTGAAACACAGCACAGTAACATG
GGTGTCTGTGGAGCTATGTCGACATCTTTATCCATTTTGCCGTCATTTGAAGAGAAGTAT
CTAAAAGTGCCAGATTCTCTTCATGTGCTCACAGAAAAGGAGCAAACCACAAACCTCATT
TCCTCACGGGCAATCCCGTCAACATCTAAGAGTGGAACAGTAGGGCATCTGTTATCTTCC
ACTTCTGGACCCCACAAAGATTTTCACTTTTCTCCAACCCCCTCTCAAGAAAGTAGGCAA
CATAGCTATCCATTTATTTCAAGTGAAGCTTCTGCAGCAACCTGCCAATCTTCACTCTCA
AACATACATTCGACATCATTGGATAATTATCCCATGGAGAACAGCAATAATTCCTGGGGA
GAAGATGCATATCATGACTGTATAAATTTTTCTATGAATGTTCCTGTTCAGAATGACCAG
GTCGAAAGCCTTGCAGTTGTCATGACGTCTGATGACCAGGTTAAGAGATCTGATTGGCAG
GACTGGTCTGATCAGCTAATTAATGATGATGATGTTTTGGATTCGAGCTGGAGTGATATT
CTTGTTGATATCAATCCTCCAGACACTAAGTTTCTGGGAGAATCTGAAGTCCATGCTTGC
CAGTCCGATACTCTTCCTCCTCTTCCTGCTGCTGCTGCTGCATTGTCTGGGCAAAGTTGC
CTAGTTGGTAGCCCATCATCTACCACAGCACTGACGAAGCCTCGCATGCGATGGACACCC
GAGCTTCACGAAGTCTTTGTAGAAGCTATCAGTAAGCTTGGTGGGAGCGAAAAAGCTACA
CCAAAGGGAGTCTTGAAGCTCATGAATGTTGAAGGCCTAACCATCTATCATGTCAAAAGC
CACTTACAGGAACACCGGAAAAGAAGACCATCAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040606
PEP Infomation

pacid=37444018 transcript=PGSC0003DMT400060325 locus=PGSC0003DMG400023467 ID=PGSC0003DMT400060325.v4.03 annot-version=v4.03
Sequence

MNMHRALGIQRSSETQHSNMGVCGAMSTSLSILPSFEEKYLKVPDSLHVLTEKEQTTNLI
SSRAIPSTSKSGTVGHLLSSTSGPHKDFHFSPTPSQESRQHSYPFISSEASAATCQSSLS
NIHSTSLDNYPMENSNNSWGEDAYHDCINFSMNVPVQNDQVESLAVVMTSDDQVKRSDWQ
DWSDQLINDDDVLDSSWSDILVDINPPDTKFLGESEVHACQSDTLPPLPAAAAALSGQSC
LVGSPSSTTALTKPRMRWTPELHEVFVEAISKLGGSEKATPKGVLKLMNVEGLTIYHVKS
HLQEHRKRRPSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400060325
Transcript Infomation

pacid=37444018 locus=PGSC0003DMG400023467 ID=PGSC0003DMT400060325.v4.03 annot-version=v4.03
Sequence

ATGAACATGCACCGTGCATTAGGTATTCAAAGATCTAGTGAAACACAGCACAGTAACATG
GGTGTCTGTGGAGCTATGTCGACATCTTTATCCATTTTGCCGTCATTTGAAGAGAAGTAT
CTAAAAGTGCCAGATTCTCTTCATGTGCTCACAGAAAAGGAGCAAACCACAAACCTCATT
TCCTCACGGGCAATCCCGTCAACATCTAAGAGTGGAACAGTAGGGCATCTGTTATCTTCC
ACTTCTGGACCCCACAAAGATTTTCACTTTTCTCCAACCCCCTCTCAAGAAAGTAGGCAA
CATAGCTATCCATTTATTTCAAGTGAAGCTTCTGCAGCAACCTGCCAATCTTCACTCTCA
AACATACATTCGACATCATTGGATAATTATCCCATGGAGAACAGCAATAATTCCTGGGGA
GAAGATGCATATCATGACTGTATAAATTTTTCTATGAATGTTCCTGTTCAGAATGACCAG
GTCGAAAGCCTTGCAGTTGTCATGACGTCTGATGACCAGGTTAAGAGATCTGATTGGCAG
GACTGGTCTGATCAGCTAATTAATGATGATGATGTTTTGGATTCGAGCTGGAGTGATATT
CTTGTTGATATCAATCCTCCAGACACTAAGTTTCTGGGAGAATCTGAAGTCCATGCTTGC
CAGTCCGATACTCTTCCTCCTCTTCCTGCTGCTGCTGCTGCATTGTCTGGGCAAAGTTGC
CTAGTTGGTAGCCCATCATCTACCACAGCACTGACGAAGCCTCGCATGCGATGGACACCC
GAGCTTCACGAAGTCTTTGTAGAAGCTATCAGTAAGCTTGGTGGGAGCGAAAAAGCTACA
CCAAAGGGAGTCTTGAAGCTCATGAATGTTGAAGGCCTAACCATCTATCATGTCAAAAGC
CACTTACAGGAACACCGGAAAAGAAGACCATCAGTGTGA