Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060317
CDS Infomation

pacid=37444424 polypeptide=PGSC0003DMP400040599 locus=PGSC0003DMG400023463 ID=PGSC0003DMT400060317.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTAATGTTATATCAGATATGCGATTAGAACCGAGCATTGATACAGATAAGCTA
AGTTACGAGATTTTCTCTATTCTAGAAAGCAAATTCTTATTTGGTTACGATGATCAAAAG
CTTTGGGTACCTAAAAATTTACCGTCTCCGGTTGAAGATAACAAAAACGACGGCGTTTTA
ACCACATCAGCGACGGAGAATATTCAGGCGATTAAGAATCAACGAGGAAAAATATGTATC
CTCAGCATTGATGGTGGTGGAATGCGAAATATATTATCAGGTAAAGCTTTAGCGTATTTG
GAACAAGCGTTAAAGGTTAAATCGGGGAATCCAGAAGCTAGAATCGCCGATTATTTCGAC
GTTGCTGTTGGTTCCGGCGTCGGAGGAATTTTCACGGCGATGTTATTTTCAACGAAGGAT
CAAAACCGTCCTGTTTTCCAAGCTGAAGATACATGGAAGCTTTTAGAGGAACAAGGTAGA
AGAATTTATCCTTCAAAAGGGTCAAGTTCTGCCGGAAATGGTTTTCTCCGGCGAGTTTTC
CGAGGTGGCGCAACCCGTTCAGATACTTCCGGTTTAGAGAAAGTGATGAAAGAAGCATTT
ATGGATAAAAAAACCGGTCGAAGCCTTACGTTAAAGGATACTCTTAAACCGGTTTTAATC
CCCTGTTATGACCTTTCAAGTACGGCGCCGTTTTTGTTCTCCCGAGCTGATGCATTCGAA
TCGGAAAGCTTTGATTTCCGGTTATGGGAAGTTTGCCGAGCTACATCAGCTGAACCGGGA
CTCTTCGAACCGGTTTGTATGAAATCCGTCGATGGAAAAACCGGGTGCGTGGCGGTTGAC
GGCGGTTTAGCTATGAGCAACCCGACGGCCGCCGCGATTACTCACGTTCTTCATAACAAA
CAGGAATTTCCTTTTGTTAGAGGTGTTGAGGACATTTTGGTCCTTTCACTTGGAACAGGG
CAGCTTCTAGAAGGAAGCTTCCAATATGAACATGTCAAAAAGTGGAAGGCTAAGGACTGG
GCTAAGCCAATGGCCCGAATCTCCGGCGACGGAGCCGCTGATATGGTTGATCACTCCGTC
GCCATGGCGTTTGGGCAATGTCGGAGTAGTAACTACGTCCGCATTCAGGCTAATGGATCG
AGCTTCGGTCGTTGTGGGGTGAACATAGATGCTGATCCAAGTCCTAACAATGTGAAAAAG
CTTGTGGGAATTGCAGATGAAATGCTGAAACAGAAAAATGTAGAATCCCTGCTATTTGGT
GGTAGGAAAATTGCAGAACAAAGCAATTTCCAGAAACTTGATTGGTTTGCTGGGGAACTT
GTACAAGAGCATCAGAGGAGGAGTTGCAGGATAGCTCCCACTGTTGCATTTAAGCAACAT
CTCACAAATCAAGAAAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400040599
PEP Infomation

pacid=37444424 transcript=PGSC0003DMT400060317 locus=PGSC0003DMG400023463 ID=PGSC0003DMT400060317.v4.03 annot-version=v4.03
Sequence

MESNVISDMRLEPSIDTDKLSYEIFSILESKFLFGYDDQKLWVPKNLPSPVEDNKNDGVL
TTSATENIQAIKNQRGKICILSIDGGGMRNILSGKALAYLEQALKVKSGNPEARIADYFD
VAVGSGVGGIFTAMLFSTKDQNRPVFQAEDTWKLLEEQGRRIYPSKGSSSAGNGFLRRVF
RGGATRSDTSGLEKVMKEAFMDKKTGRSLTLKDTLKPVLIPCYDLSSTAPFLFSRADAFE
SESFDFRLWEVCRATSAEPGLFEPVCMKSVDGKTGCVAVDGGLAMSNPTAAAITHVLHNK
QEFPFVRGVEDILVLSLGTGQLLEGSFQYEHVKKWKAKDWAKPMARISGDGAADMVDHSV
AMAFGQCRSSNYVRIQANGSSFGRCGVNIDADPSPNNVKKLVGIADEMLKQKNVESLLFG
GRKIAEQSNFQKLDWFAGELVQEHQRRSCRIAPTVAFKQHLTNQEK*

Transcript Sequence

Transcript ID

PGSC0003DMT400060317
Transcript Infomation

pacid=37444424 locus=PGSC0003DMG400023463 ID=PGSC0003DMT400060317.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTAATGTTATATCAGATATGCGATTAGAACCGAGCATTGATACAGATAAGCTA
AGTTACGAGATTTTCTCTATTCTAGAAAGCAAATTCTTATTTGGTTACGATGATCAAAAG
CTTTGGGTACCTAAAAATTTACCGTCTCCGGTTGAAGATAACAAAAACGACGGCGTTTTA
ACCACATCAGCGACGGAGAATATTCAGGCGATTAAGAATCAACGAGGAAAAATATGTATC
CTCAGCATTGATGGTGGTGGAATGCGAAATATATTATCAGGTAAAGCTTTAGCGTATTTG
GAACAAGCGTTAAAGGTTAAATCGGGGAATCCAGAAGCTAGAATCGCCGATTATTTCGAC
GTTGCTGTTGGTTCCGGCGTCGGAGGAATTTTCACGGCGATGTTATTTTCAACGAAGGAT
CAAAACCGTCCTGTTTTCCAAGCTGAAGATACATGGAAGCTTTTAGAGGAACAAGGTAGA
AGAATTTATCCTTCAAAAGGGTCAAGTTCTGCCGGAAATGGTTTTCTCCGGCGAGTTTTC
CGAGGTGGCGCAACCCGTTCAGATACTTCCGGTTTAGAGAAAGTGATGAAAGAAGCATTT
ATGGATAAAAAAACCGGTCGAAGCCTTACGTTAAAGGATACTCTTAAACCGGTTTTAATC
CCCTGTTATGACCTTTCAAGTACGGCGCCGTTTTTGTTCTCCCGAGCTGATGCATTCGAA
TCGGAAAGCTTTGATTTCCGGTTATGGGAAGTTTGCCGAGCTACATCAGCTGAACCGGGA
CTCTTCGAACCGGTTTGTATGAAATCCGTCGATGGAAAAACCGGGTGCGTGGCGGTTGAC
GGCGGTTTAGCTATGAGCAACCCGACGGCCGCCGCGATTACTCACGTTCTTCATAACAAA
CAGGAATTTCCTTTTGTTAGAGGTGTTGAGGACATTTTGGTCCTTTCACTTGGAACAGGG
CAGCTTCTAGAAGGAAGCTTCCAATATGAACATGTCAAAAAGTGGAAGGCTAAGGACTGG
GCTAAGCCAATGGCCCGAATCTCCGGCGACGGAGCCGCTGATATGGTTGATCACTCCGTC
GCCATGGCGTTTGGGCAATGTCGGAGTAGTAACTACGTCCGCATTCAGGCTAATGGATCG
AGCTTCGGTCGTTGTGGGGTGAACATAGATGCTGATCCAAGTCCTAACAATGTGAAAAAG
CTTGTGGGAATTGCAGATGAAATGCTGAAACAGAAAAATGTAGAATCCCTGCTATTTGGT
GGTAGGAAAATTGCAGAACAAAGCAATTTCCAGAAACTTGATTGGTTTGCTGGGGAACTT
GTACAAGAGCATCAGAGGAGGAGTTGCAGGATAGCTCCCACTGTTGCATTTAAGCAACAT
CTCACAAATCAAGAAAAATAA