Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060309
CDS Infomation

pacid=37443110 polypeptide=PGSC0003DMP400040592 locus=PGSC0003DMG400023459 ID=PGSC0003DMT400060309.v4.03 annot-version=v4.03
Sequence

ATGTATAAGAACCAGTTACAGGAACTGGCACAAAGGAGTTGCTTCAACTTGCCGTCGTAT
ACTTGTATAAGGGAAGGTCCGGATCATGCGCCTAGGTTTAAGGCTACGGTTAATTTCAAT
GGTGAGGTCTTTGAGAGTCCAAATTACTGCTCTACACTTCGACAGGCTGAACATTCTGCT
GCTGAGGTTGCGTTGAATTCACTCTCTAATCGAGGTCCCTCCAACTCGCTTGCTGCTAGA
ATTCTGGATGAGACAGGCGTATATAAGAATCTCTTACAGGAAGTTTCACAAAGAGTAGGA
GCATCATTGCCAGCATATACGACTTTTAGATCTGGTCTAGGACATCTTCCTGTCTTTACC
TGCACAGTAGAGTTGGCGGGCGTTACATTTACTGGTGAGTCAGCAAAGAATAAGAAGCAA
GCTGAAAAGAATGCAGCTATGGCAGCTTGGTCATCTCTGAAATTATTGGCACAGCAGTCT
GAAAGTGCAAAACCAGACCGAAGAAGAAATGATGAGCAAGAGCATGTAACTGTTGCACGT
GCACTACAAAGGTACATTTTGAAGGCAAGGGCGGCTAGAGTATCATTCCCAATTAAATTT
CCGACACCTAATCCAAGACCATCAAGTGTACAGCAGCTTTCATCTACTACATCAAAACTT
CTTCCCCTAATATGTCCAAGAACTGCTCCTCGCAGTAGACCGGTCAGTCCGTTGTGTCTA
AAACCTGCTTCTCAAAGTAGACCCATTGATAATACAGGAAGTGATGCATCATTGAGTCCA
AGGACTGCTCAAACCATAAATAATATTTTAAAGGACAGTTTTGCTATGGATAGTCACAGG
GTTCGACCAGAGAAGTTCCCTGCTGCTGGTGCAGCACCATATATTCCTGTCAGGCATTTT
GGCCCACACCATCGGATGGCTCCTCCGGTGACCATACGGAATGCAATTCCTGTTTTCTCT
GCACCACCACTTCCTCAATCATCTCAGCCTCCTAGGGTGATGAGGCCTCCAGGTCTGGGA
CTGGCACCACCTGTCTGTATAAGACAGGCAGTGCCGGTTTATGCTGCACCCCCTGTTCGG
GCAGAGGAACTTCCCACATTAGATAGGGTGATGAGGCATTCAGGTTTGGGGGTGGCACCA
GTTTATGCTGTACCCTCTGTTCCTAAAGCTCCTCCTCTTCTAGTTGACGAACCACTAGCT
TCAAAGGCACCCGAAATTCAGGTACTTGACTTACCAACTTGTAAAGCAGTGCTAGGCAAG
GCCGAATCGCTACATGACCATTCTGAGGAGAAATCATGTTCTGAAGTCCAACCGACTAAG
AGAGAGGAGCCACTTGACTTTGAAGTTTCAAGGAGTGCGACAATGCCAGTGGAAGGAACC
AAGGTTGCAGCCAAGGAGAAGCCACTTGACTTTGAAGTTTCAAGGGGTGCGACAATGCCA
GTTGAAGGAACCAAGGTTGCAGCCGAGGAGAAGCCACATGACTCTCTGGAAATTGAGAAT
TTGAAACAGCTAAAGATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400040592
PEP Infomation

pacid=37443110 transcript=PGSC0003DMT400060309 locus=PGSC0003DMG400023459 ID=PGSC0003DMT400060309.v4.03 annot-version=v4.03
Sequence

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFESPNYCSTLRQAEHSA
AEVALNSLSNRGPSNSLAARILDETGVYKNLLQEVSQRVGASLPAYTTFRSGLGHLPVFT
CTVELAGVTFTGESAKNKKQAEKNAAMAAWSSLKLLAQQSESAKPDRRRNDEQEHVTVAR
ALQRYILKARAARVSFPIKFPTPNPRPSSVQQLSSTTSKLLPLICPRTAPRSRPVSPLCL
KPASQSRPIDNTGSDASLSPRTAQTINNILKDSFAMDSHRVRPEKFPAAGAAPYIPVRHF
GPHHRMAPPVTIRNAIPVFSAPPLPQSSQPPRVMRPPGLGLAPPVCIRQAVPVYAAPPVR
AEELPTLDRVMRHSGLGVAPVYAVPSVPKAPPLLVDEPLASKAPEIQVLDLPTCKAVLGK
AESLHDHSEEKSCSEVQPTKREEPLDFEVSRSATMPVEGTKVAAKEKPLDFEVSRGATMP
VEGTKVAAEEKPHDSLEIENLKQLKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400060309
Transcript Infomation

pacid=37443110 locus=PGSC0003DMG400023459 ID=PGSC0003DMT400060309.v4.03 annot-version=v4.03
Sequence

ATGTATAAGAACCAGTTACAGGAACTGGCACAAAGGAGTTGCTTCAACTTGCCGTCGTAT
ACTTGTATAAGGGAAGGTCCGGATCATGCGCCTAGGTTTAAGGCTACGGTTAATTTCAAT
GGTGAGGTCTTTGAGAGTCCAAATTACTGCTCTACACTTCGACAGGCTGAACATTCTGCT
GCTGAGGTTGCGTTGAATTCACTCTCTAATCGAGGTCCCTCCAACTCGCTTGCTGCTAGA
ATTCTGGATGAGACAGGCGTATATAAGAATCTCTTACAGGAAGTTTCACAAAGAGTAGGA
GCATCATTGCCAGCATATACGACTTTTAGATCTGGTCTAGGACATCTTCCTGTCTTTACC
TGCACAGTAGAGTTGGCGGGCGTTACATTTACTGGTGAGTCAGCAAAGAATAAGAAGCAA
GCTGAAAAGAATGCAGCTATGGCAGCTTGGTCATCTCTGAAATTATTGGCACAGCAGTCT
GAAAGTGCAAAACCAGACCGAAGAAGAAATGATGAGCAAGAGCATGTAACTGTTGCACGT
GCACTACAAAGGTACATTTTGAAGGCAAGGGCGGCTAGAGTATCATTCCCAATTAAATTT
CCGACACCTAATCCAAGACCATCAAGTGTACAGCAGCTTTCATCTACTACATCAAAACTT
CTTCCCCTAATATGTCCAAGAACTGCTCCTCGCAGTAGACCGGTCAGTCCGTTGTGTCTA
AAACCTGCTTCTCAAAGTAGACCCATTGATAATACAGGAAGTGATGCATCATTGAGTCCA
AGGACTGCTCAAACCATAAATAATATTTTAAAGGACAGTTTTGCTATGGATAGTCACAGG
GTTCGACCAGAGAAGTTCCCTGCTGCTGGTGCAGCACCATATATTCCTGTCAGGCATTTT
GGCCCACACCATCGGATGGCTCCTCCGGTGACCATACGGAATGCAATTCCTGTTTTCTCT
GCACCACCACTTCCTCAATCATCTCAGCCTCCTAGGGTGATGAGGCCTCCAGGTCTGGGA
CTGGCACCACCTGTCTGTATAAGACAGGCAGTGCCGGTTTATGCTGCACCCCCTGTTCGG
GCAGAGGAACTTCCCACATTAGATAGGGTGATGAGGCATTCAGGTTTGGGGGTGGCACCA
GTTTATGCTGTACCCTCTGTTCCTAAAGCTCCTCCTCTTCTAGTTGACGAACCACTAGCT
TCAAAGGCACCCGAAATTCAGGTACTTGACTTACCAACTTGTAAAGCAGTGCTAGGCAAG
GCCGAATCGCTACATGACCATTCTGAGGAGAAATCATGTTCTGAAGTCCAACCGACTAAG
AGAGAGGAGCCACTTGACTTTGAAGTTTCAAGGAGTGCGACAATGCCAGTGGAAGGAACC
AAGGTTGCAGCCAAGGAGAAGCCACTTGACTTTGAAGTTTCAAGGGGTGCGACAATGCCA
GTTGAAGGAACCAAGGTTGCAGCCGAGGAGAAGCCACATGACTCTCTGGAAATTGAGAAT
TTGAAACAGCTAAAGATATGA