Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060290
CDS Infomation

pacid=37442115 polypeptide=PGSC0003DMP400040577 locus=PGSC0003DMG400023451 ID=PGSC0003DMT400060290.v4.03 annot-version=v4.03
Sequence

ATGGCGCCACCGGCGAATGGAGGTGGTGGAGAAGTGCAGGAACAGGCGGCTCAGCCGCAG
CAACAGCAGCGGGGAATTGGACAGATGCTGACGGGAGTAATAAGAATAGCGGTTTTCTGG
TACTTTGCTTCCAAGTTCTTCTCACCGAAAAAGCCTATGTCCGATCCGTCGGTTCCTAAT
CTCCAGATCTCAAATCTATTCAACAAAGGCGAACCTTTGGACATGTGGTTCTATCTTTCC
GAACAACAAAATTTCAGTGACTTTGGTAATGAAGGTGCACTTATTTGGCATGAGACAAAC
ATACCATATGCAGTTTGGGGACCAGAGAGTACCAGGTCTCTTTCTTTGAAGTATCATCTA
TCTGAGGCAGTGAAGAACAATGGGAGTCTTTATGCTCATGTTTACTTTGCACGTTCTGGG
TATTCTCCAGATCCAAATGATCCTGAGTATCAGCCATTGGCTGCTTTTGGACGGACATAT
TCTATTGTGACATATTTACCCAAGTCTAAAGCAGATAAAAAGAAGAGCCTTTTAAGAAAT
TCTGAGGACTCGAAGGAGGATGTCACCATTCCTGAGTTTCCTCAGGCGGTTCAAGAAGCT
CAACATGATCTTAAGGAGGATGGTCCTCCTGAATGGATTTCATATTGGAAACCTAATGTT
ACAATCAACTTGGTCGATGATTTCACAAGATACACTGCAAATGCCATTCCACCTATTGTT
GCTCCTTACATCAATATTGAATCTACAACAGGAAACTACTATCCGACTGTTTTCTTCAAT
GAGTTTTGGTTGCTTAGGGATAAATTAATAGCTATCAATGATACGGTAACTGAGGTGCCT
CTGCATCTAGAGGTGAGTCCCATAAGCATGACAAAATGGCAGCTATTCCTGCAGATGGAC
CAGTCTTTCCAAGTTCATCGTAGTTATGGTAGCATGCTCGACGGGGAGTCTGATGAACTA
AAGAGAGTGTTTCTGGAAGGAAATCCGTACCTTCTGGGGGTGACTATGATTGTTTCAGTA
ATGCATTCACTATTTGATTTCCTGGCATTCAAGAATGATATTCAATTTTGGAATAAAAAC
AAGTCCATGGAAGGGCTATCTGCAAAATCAGTGATTGTGAACTTTTTCTGCCAGTTTATT
GTCTTCCTGTATTTGCTTGATAATGATACTTCATGGATGATACTTGCTAGTTCTGGTGTT
GGTTGTTGCATTGAGTTCTGGAAAATAGGGAAGGCCATGCACATTGAGATTGACAGATCT
GGTAGAATACCCATGTTGAGGTTCCGAGATCGGGAATCATATGCTGGAAATAAGACGAAA
GAATATGATGATCTTGCCATGAAATATTTGTCCTATGTGTTGTTCTTCCTTGCTGTGTGC
TTTGCCATATACTCTCTAATGTATGACCGCCACAAGAGTTGGTATTCATGGATCCTCTCA
TCCCTGACAAGCTGCGTTTATATGTTTGGTTTTATTATGATGTGTCCACAGTTGTTCATC
AATTATAAACTGAAGTCTGTTGCTCATTTACCTTGGAGGCAGATGACTTACAAATTTCTA
AATACCATCATTGATGATTTGTTTGCATTTGTGATAAAAATGCCAATGCTACATCGCCTG
TCTGTGTTCCGTGATGATCTTATATTTTTGATTATGCTATATCAGAGATGGGTTTATCCA
GTAGATAAGAAACGGGTGAATGAGTTTGGTTTTGCTGCGGAAGATGTGGATCAAGCTGCC
AGTAGTTCAGATACTCCAGCACTGAAAGAAGACGAGAAGAAAACTAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040577
PEP Infomation

pacid=37442115 transcript=PGSC0003DMT400060290 locus=PGSC0003DMG400023451 ID=PGSC0003DMT400060290.v4.03 annot-version=v4.03
Sequence

MAPPANGGGGEVQEQAAQPQQQQRGIGQMLTGVIRIAVFWYFASKFFSPKKPMSDPSVPN
LQISNLFNKGEPLDMWFYLSEQQNFSDFGNEGALIWHETNIPYAVWGPESTRSLSLKYHL
SEAVKNNGSLYAHVYFARSGYSPDPNDPEYQPLAAFGRTYSIVTYLPKSKADKKKSLLRN
SEDSKEDVTIPEFPQAVQEAQHDLKEDGPPEWISYWKPNVTINLVDDFTRYTANAIPPIV
APYINIESTTGNYYPTVFFNEFWLLRDKLIAINDTVTEVPLHLEVSPISMTKWQLFLQMD
QSFQVHRSYGSMLDGESDELKRVFLEGNPYLLGVTMIVSVMHSLFDFLAFKNDIQFWNKN
KSMEGLSAKSVIVNFFCQFIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRS
GRIPMLRFRDRESYAGNKTKEYDDLAMKYLSYVLFFLAVCFAIYSLMYDRHKSWYSWILS
SLTSCVYMFGFIMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPMLHRL
SVFRDDLIFLIMLYQRWVYPVDKKRVNEFGFAAEDVDQAASSSDTPALKEDEKKTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400060290
Transcript Infomation

pacid=37442115 locus=PGSC0003DMG400023451 ID=PGSC0003DMT400060290.v4.03 annot-version=v4.03
Sequence

ATGGCGCCACCGGCGAATGGAGGTGGTGGAGAAGTGCAGGAACAGGCGGCTCAGCCGCAG
CAACAGCAGCGGGGAATTGGACAGATGCTGACGGGAGTAATAAGAATAGCGGTTTTCTGG
TACTTTGCTTCCAAGTTCTTCTCACCGAAAAAGCCTATGTCCGATCCGTCGGTTCCTAAT
CTCCAGATCTCAAATCTATTCAACAAAGGCGAACCTTTGGACATGTGGTTCTATCTTTCC
GAACAACAAAATTTCAGTGACTTTGGTAATGAAGGTGCACTTATTTGGCATGAGACAAAC
ATACCATATGCAGTTTGGGGACCAGAGAGTACCAGGTCTCTTTCTTTGAAGTATCATCTA
TCTGAGGCAGTGAAGAACAATGGGAGTCTTTATGCTCATGTTTACTTTGCACGTTCTGGG
TATTCTCCAGATCCAAATGATCCTGAGTATCAGCCATTGGCTGCTTTTGGACGGACATAT
TCTATTGTGACATATTTACCCAAGTCTAAAGCAGATAAAAAGAAGAGCCTTTTAAGAAAT
TCTGAGGACTCGAAGGAGGATGTCACCATTCCTGAGTTTCCTCAGGCGGTTCAAGAAGCT
CAACATGATCTTAAGGAGGATGGTCCTCCTGAATGGATTTCATATTGGAAACCTAATGTT
ACAATCAACTTGGTCGATGATTTCACAAGATACACTGCAAATGCCATTCCACCTATTGTT
GCTCCTTACATCAATATTGAATCTACAACAGGAAACTACTATCCGACTGTTTTCTTCAAT
GAGTTTTGGTTGCTTAGGGATAAATTAATAGCTATCAATGATACGGTAACTGAGGTGCCT
CTGCATCTAGAGGTGAGTCCCATAAGCATGACAAAATGGCAGCTATTCCTGCAGATGGAC
CAGTCTTTCCAAGTTCATCGTAGTTATGGTAGCATGCTCGACGGGGAGTCTGATGAACTA
AAGAGAGTGTTTCTGGAAGGAAATCCGTACCTTCTGGGGGTGACTATGATTGTTTCAGTA
ATGCATTCACTATTTGATTTCCTGGCATTCAAGAATGATATTCAATTTTGGAATAAAAAC
AAGTCCATGGAAGGGCTATCTGCAAAATCAGTGATTGTGAACTTTTTCTGCCAGTTTATT
GTCTTCCTGTATTTGCTTGATAATGATACTTCATGGATGATACTTGCTAGTTCTGGTGTT
GGTTGTTGCATTGAGTTCTGGAAAATAGGGAAGGCCATGCACATTGAGATTGACAGATCT
GGTAGAATACCCATGTTGAGGTTCCGAGATCGGGAATCATATGCTGGAAATAAGACGAAA
GAATATGATGATCTTGCCATGAAATATTTGTCCTATGTGTTGTTCTTCCTTGCTGTGTGC
TTTGCCATATACTCTCTAATGTATGACCGCCACAAGAGTTGGTATTCATGGATCCTCTCA
TCCCTGACAAGCTGCGTTTATATGTTTGGTTTTATTATGATGTGTCCACAGTTGTTCATC
AATTATAAACTGAAGTCTGTTGCTCATTTACCTTGGAGGCAGATGACTTACAAATTTCTA
AATACCATCATTGATGATTTGTTTGCATTTGTGATAAAAATGCCAATGCTACATCGCCTG
TCTGTGTTCCGTGATGATCTTATATTTTTGATTATGCTATATCAGAGATGGGTTTATCCA
GTAGATAAGAAACGGGTGAATGAGTTTGGTTTTGCTGCGGAAGATGTGGATCAAGCTGCC
AGTAGTTCAGATACTCCAGCACTGAAAGAAGACGAGAAGAAAACTAACTAA