Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060267
CDS Infomation

pacid=37444658 polypeptide=PGSC0003DMP400040559 locus=PGSC0003DMG400023442 ID=PGSC0003DMT400060267.v4.03 annot-version=v4.03
Sequence

ATGCCGTTATTTAAAAGAAAGCCATTTGCTTTGGCGGAAAAACCAAAGGATTTGAAGCCA
AATGAACTCGTGTTCCAAGTTCGGTTTACTAAAGAGATATTTAGGGATTATAGTGAATAT
CTGAGACGAACAAACCTGTATCGCCATAGGGTGTGGACATGCAAATTGACAGGAAAGAAT
TACTTGACGTATGAGGAGGCTTTGGTTTCGGAGAAGAAAGCTGCAGAAGAAGTTCAGAAG
TTCCCTGAGGAACTAGTGGCCCCAGTTCTTCGCGATGTGCAATTCAGTATGCTCAGTTTA
AAAGATCTTGGGGATGCTGTTGCTCAAAAATTACAGGGCTGTCTTTCAGAAGGTAGTGAA
TTATATGGGAGAAAAAACAATCATGTATATTCCTGCAAAATCGAGAGAGTTGTGAAGGAT
GGTGAGAAAACTCGTTATGAGGTTGCATGGCTAGACAAATATGAAAGACTGCCTGAGAAT
ACAGCCATCGATGAAGAAGATCTGATTAGGTGCAAACTGCGATTTAGTAGAGCTTTTCTG
AAATCTTTTATCAGAGAATCTACATATCGAAGTATTCCTTGGGTCTTGCATGAAAAATTG
GCAAAGAAGCATGGGATTCCAACTGATCCTCCAGATGATCTTAAAGACCAATTTTTTATG
CAGGATGGAGTGGTTGTTGTAAATAGGAAGAGAAAGAAAAGTGAAGATAGAGAGGCTAAA
GAGAATGGCTTCCAAGATCCCTACGAGATAGGAAGAGAAGACAAACTGAAGGCACAGTCC
ATTAGATATCCAATCGATGATCTTTTGGTGCAATACACAGAGTTCGATAAACAGTTGGCT
GAACGCCCTCCTCCATGCAGGGAATTTAACGTCCCAATGGAATGTGTAGGGGATCATTTG
ATGGTCTGGGATTTCTGTACCTCATTTGGCAGGTTATTGCACCTGTCACCATTCTCCCTT
GAAGATTTTGAAAGGGCTGTCTGTCAAAAAGGCAGCAATATTGTTCTCATAACTGAATGT
CATTCATCCCTTCTTCGTTTTCTTTTGAAAGATAACAGTGAGTATTTCATAGCTGTACAG
AAGAAAAGACCAAAGCTGAAGATTACTTTAATCACCTGGACAGAGTATTTGTCCGATTTT
TTGGAATTGACTGGTACTGTTGAATTGTCTAATCATGTTGCAACAATTAAGAGGGGTCAC
TATGGGCTTCTAGATATTCAGGCCAAATTGGCAATCTTGCGTGAACTGGTCTGTCGAGTC
CTTGAGACAGAGTATTTTAAGGAGAAGTTGGATGAGGATATTGAAAAGCAGTATGCACTT
GCAGCAACAAGGAGAGAGGAAATTTTGGAAGAATCTAGGAAGAAGAGAGAAGACCATTTG
AAAATCAAGTCTAATGGGAAGGAAGCAACAAAAGGGCATGGCAACTCCTCAGATACTGGG
AGTGATAACCACCTCAGAGAGAATGGAGATATGCCAAGTAGCAATGGCAAACAGACATCT
CCATCAAAACATTCATTAGAAAACAGTGAGAGTGAGCTAACAATCTCCTCATTGAAAAAT
TCTAAGAAGAGAAAGGTTGACGTCAAAAATTCTACATCAAAGATGAATGCTTCCTCTAAG
ATTGCTTCTGATAAATTGATAAAGGATGAAGGGAAGGAAACGTTAGAAAGCAGGAGTATG
GACCAAAGAGCTGCTCACAAAATGCGGAAGAATGAGATAAAGGAGCATCTTGAAAACAGG
AGTAAGGAGCAAAGGAAAGAATATCTTGAACGGGAAATAGAGAAAAGAGTAATACGCACC
AATCCATTGGGAAAGGACCGAGATTATAATAGATATTGGTTTTTCCGCCGTGATGGAAGA
ATATTTGTTGAGAGTTCAGATTCCGTCGAGTGGGGCTATTACTCTTCCCAGGAGGAGCTT
GATGCTCTGATTGGATCACTGAATGTCAAGGGTGAAAGGGAGAGGGCTCTTAAAAAGCAA
CTCGAAAATCTCTACCACAAAATAAGCTTGGAACTTCAAAAGAGATCGAAGGAGGTGGCT
CAGAAGGCAGAAACAGACGACGCTGATGTTCGGAGATCAACACGTGTCCGTGCTCCAGCA
GGAGATAATCCTGCTCTTGCCTTCTTGAAGTACGTTAACAAGTGGAAAGAAGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040559
PEP Infomation

pacid=37444658 transcript=PGSC0003DMT400060267 locus=PGSC0003DMG400023442 ID=PGSC0003DMT400060267.v4.03 annot-version=v4.03
Sequence

MPLFKRKPFALAEKPKDLKPNELVFQVRFTKEIFRDYSEYLRRTNLYRHRVWTCKLTGKN
YLTYEEALVSEKKAAEEVQKFPEELVAPVLRDVQFSMLSLKDLGDAVAQKLQGCLSEGSE
LYGRKNNHVYSCKIERVVKDGEKTRYEVAWLDKYERLPENTAIDEEDLIRCKLRFSRAFL
KSFIRESTYRSIPWVLHEKLAKKHGIPTDPPDDLKDQFFMQDGVVVVNRKRKKSEDREAK
ENGFQDPYEIGREDKLKAQSIRYPIDDLLVQYTEFDKQLAERPPPCREFNVPMECVGDHL
MVWDFCTSFGRLLHLSPFSLEDFERAVCQKGSNIVLITECHSSLLRFLLKDNSEYFIAVQ
KKRPKLKITLITWTEYLSDFLELTGTVELSNHVATIKRGHYGLLDIQAKLAILRELVCRV
LETEYFKEKLDEDIEKQYALAATRREEILEESRKKREDHLKIKSNGKEATKGHGNSSDTG
SDNHLRENGDMPSSNGKQTSPSKHSLENSESELTISSLKNSKKRKVDVKNSTSKMNASSK
IASDKLIKDEGKETLESRSMDQRAAHKMRKNEIKEHLENRSKEQRKEYLEREIEKRVIRT
NPLGKDRDYNRYWFFRRDGRIFVESSDSVEWGYYSSQEELDALIGSLNVKGERERALKKQ
LENLYHKISLELQKRSKEVAQKAETDDADVRRSTRVRAPAGDNPALAFLKYVNKWKED*

Transcript Sequence

Transcript ID

PGSC0003DMT400060267
Transcript Infomation

pacid=37444658 locus=PGSC0003DMG400023442 ID=PGSC0003DMT400060267.v4.03 annot-version=v4.03
Sequence

ATGCCGTTATTTAAAAGAAAGCCATTTGCTTTGGCGGAAAAACCAAAGGATTTGAAGCCA
AATGAACTCGTGTTCCAAGTTCGGTTTACTAAAGAGATATTTAGGGATTATAGTGAATAT
CTGAGACGAACAAACCTGTATCGCCATAGGGTGTGGACATGCAAATTGACAGGAAAGAAT
TACTTGACGTATGAGGAGGCTTTGGTTTCGGAGAAGAAAGCTGCAGAAGAAGTTCAGAAG
TTCCCTGAGGAACTAGTGGCCCCAGTTCTTCGCGATGTGCAATTCAGTATGCTCAGTTTA
AAAGATCTTGGGGATGCTGTTGCTCAAAAATTACAGGGCTGTCTTTCAGAAGGTAGTGAA
TTATATGGGAGAAAAAACAATCATGTATATTCCTGCAAAATCGAGAGAGTTGTGAAGGAT
GGTGAGAAAACTCGTTATGAGGTTGCATGGCTAGACAAATATGAAAGACTGCCTGAGAAT
ACAGCCATCGATGAAGAAGATCTGATTAGGTGCAAACTGCGATTTAGTAGAGCTTTTCTG
AAATCTTTTATCAGAGAATCTACATATCGAAGTATTCCTTGGGTCTTGCATGAAAAATTG
GCAAAGAAGCATGGGATTCCAACTGATCCTCCAGATGATCTTAAAGACCAATTTTTTATG
CAGGATGGAGTGGTTGTTGTAAATAGGAAGAGAAAGAAAAGTGAAGATAGAGAGGCTAAA
GAGAATGGCTTCCAAGATCCCTACGAGATAGGAAGAGAAGACAAACTGAAGGCACAGTCC
ATTAGATATCCAATCGATGATCTTTTGGTGCAATACACAGAGTTCGATAAACAGTTGGCT
GAACGCCCTCCTCCATGCAGGGAATTTAACGTCCCAATGGAATGTGTAGGGGATCATTTG
ATGGTCTGGGATTTCTGTACCTCATTTGGCAGGTTATTGCACCTGTCACCATTCTCCCTT
GAAGATTTTGAAAGGGCTGTCTGTCAAAAAGGCAGCAATATTGTTCTCATAACTGAATGT
CATTCATCCCTTCTTCGTTTTCTTTTGAAAGATAACAGTGAGTATTTCATAGCTGTACAG
AAGAAAAGACCAAAGCTGAAGATTACTTTAATCACCTGGACAGAGTATTTGTCCGATTTT
TTGGAATTGACTGGTACTGTTGAATTGTCTAATCATGTTGCAACAATTAAGAGGGGTCAC
TATGGGCTTCTAGATATTCAGGCCAAATTGGCAATCTTGCGTGAACTGGTCTGTCGAGTC
CTTGAGACAGAGTATTTTAAGGAGAAGTTGGATGAGGATATTGAAAAGCAGTATGCACTT
GCAGCAACAAGGAGAGAGGAAATTTTGGAAGAATCTAGGAAGAAGAGAGAAGACCATTTG
AAAATCAAGTCTAATGGGAAGGAAGCAACAAAAGGGCATGGCAACTCCTCAGATACTGGG
AGTGATAACCACCTCAGAGAGAATGGAGATATGCCAAGTAGCAATGGCAAACAGACATCT
CCATCAAAACATTCATTAGAAAACAGTGAGAGTGAGCTAACAATCTCCTCATTGAAAAAT
TCTAAGAAGAGAAAGGTTGACGTCAAAAATTCTACATCAAAGATGAATGCTTCCTCTAAG
ATTGCTTCTGATAAATTGATAAAGGATGAAGGGAAGGAAACGTTAGAAAGCAGGAGTATG
GACCAAAGAGCTGCTCACAAAATGCGGAAGAATGAGATAAAGGAGCATCTTGAAAACAGG
AGTAAGGAGCAAAGGAAAGAATATCTTGAACGGGAAATAGAGAAAAGAGTAATACGCACC
AATCCATTGGGAAAGGACCGAGATTATAATAGATATTGGTTTTTCCGCCGTGATGGAAGA
ATATTTGTTGAGAGTTCAGATTCCGTCGAGTGGGGCTATTACTCTTCCCAGGAGGAGCTT
GATGCTCTGATTGGATCACTGAATGTCAAGGGTGAAAGGGAGAGGGCTCTTAAAAAGCAA
CTCGAAAATCTCTACCACAAAATAAGCTTGGAACTTCAAAAGAGATCGAAGGAGGTGGCT
CAGAAGGCAGAAACAGACGACGCTGATGTTCGGAGATCAACACGTGTCCGTGCTCCAGCA
GGAGATAATCCTGCTCTTGCCTTCTTGAAGTACGTTAACAAGTGGAAAGAAGACTAA