Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060254
CDS Infomation

pacid=37442993 polypeptide=PGSC0003DMP400040547 locus=PGSC0003DMG402023438 ID=PGSC0003DMT400060254.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGATAGAGCACAAAATGGTAGCTGTAAATGGCCTAAATATGCATATAGCAGAA
TTAGGCCAAGGCCCAACAATCCTCTTCATCCATGGCTTCCCTGAGCTCTGGTACTCATGG
CGCCACCAAATGGTCTACTTAGCTGAACGTGGGTACCGTGCTGTGGCGCCTGACTTAAGG
GGTTATGGAGATACTACTGGTGCACCAATTAATGACCCTTCGAAGTTCAGTATTTTTCAC
CTTGTGGGTGATGTTGTAGCATTGCTTGAAGCCATTGCTCCTAATGAAGACAAGGTGTTT
GTTGTTGCGCATGACTGGGGCGCGTTAATTGCTTGGCATTTATGCCTTTTTAGGCCAGAT
AAAGTTAAAGCCTTGGTGAATTTGAGTGTCCATTACCACCCAAGGAACTCAAATATGAAT
CCTATTGAGGGGCTAAAGGCTTTATATGGGGAAGATTATTATATCTGCAGATTTCAGGTA
CCGGGCGAAATTGAAGCTGAATTTGCTCCAATTGGTGCTAAGTCTGTTCTTAAGAAAATG
TTGACATACCGCGATCCTGCACCCTTTTATTTTCCTAAAGGCAAAGGCCTTGAAGCTATC
GCTGATGCTCCGATTGTCCTTTCAACATGGCTCTCTGAGGAAGAGTTGGATTACTATGCC
AACAAGTTTGAACAGACTGGTTTCACTGGTGCACTTAACTATTACCGAGCTTTATCCATA
AATTCAGAACTCACTGCACCATGGACAGGGGCACAAGTTAATGTTCCAACCAAGTTTATT
GTCGGGGAATTCGACTTGGCGTACCATATGCGAGGTGCTAAAGAGTACATACACAATGGC
GGATTTAAGAAATATGTTCCATTGTTGGAGGAAGTTGTGGTTTTGGAAGGTGCAGCTCAC
TTTGTCAATCAAGAAAGGCCACATGAGATTAGCAAGCACATTTATGACTTCATTCAAAAG
TTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040547
PEP Infomation

pacid=37442993 transcript=PGSC0003DMT400060254 locus=PGSC0003DMG402023438 ID=PGSC0003DMT400060254.v4.03 annot-version=v4.03
Sequence

MEKIEHKMVAVNGLNMHIAELGQGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR
GYGDTTGAPINDPSKFSIFHLVGDVVALLEAIAPNEDKVFVVAHDWGALIAWHLCLFRPD
KVKALVNLSVHYHPRNSNMNPIEGLKALYGEDYYICRFQVPGEIEAEFAPIGAKSVLKKM
LTYRDPAPFYFPKGKGLEAIADAPIVLSTWLSEEELDYYANKFEQTGFTGALNYYRALSI
NSELTAPWTGAQVNVPTKFIVGEFDLAYHMRGAKEYIHNGGFKKYVPLLEEVVVLEGAAH
FVNQERPHEISKHIYDFIQKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400060254
Transcript Infomation

pacid=37442993 locus=PGSC0003DMG402023438 ID=PGSC0003DMT400060254.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGATAGAGCACAAAATGGTAGCTGTAAATGGCCTAAATATGCATATAGCAGAA
TTAGGCCAAGGCCCAACAATCCTCTTCATCCATGGCTTCCCTGAGCTCTGGTACTCATGG
CGCCACCAAATGGTCTACTTAGCTGAACGTGGGTACCGTGCTGTGGCGCCTGACTTAAGG
GGTTATGGAGATACTACTGGTGCACCAATTAATGACCCTTCGAAGTTCAGTATTTTTCAC
CTTGTGGGTGATGTTGTAGCATTGCTTGAAGCCATTGCTCCTAATGAAGACAAGGTGTTT
GTTGTTGCGCATGACTGGGGCGCGTTAATTGCTTGGCATTTATGCCTTTTTAGGCCAGAT
AAAGTTAAAGCCTTGGTGAATTTGAGTGTCCATTACCACCCAAGGAACTCAAATATGAAT
CCTATTGAGGGGCTAAAGGCTTTATATGGGGAAGATTATTATATCTGCAGATTTCAGGTA
CCGGGCGAAATTGAAGCTGAATTTGCTCCAATTGGTGCTAAGTCTGTTCTTAAGAAAATG
TTGACATACCGCGATCCTGCACCCTTTTATTTTCCTAAAGGCAAAGGCCTTGAAGCTATC
GCTGATGCTCCGATTGTCCTTTCAACATGGCTCTCTGAGGAAGAGTTGGATTACTATGCC
AACAAGTTTGAACAGACTGGTTTCACTGGTGCACTTAACTATTACCGAGCTTTATCCATA
AATTCAGAACTCACTGCACCATGGACAGGGGCACAAGTTAATGTTCCAACCAAGTTTATT
GTCGGGGAATTCGACTTGGCGTACCATATGCGAGGTGCTAAAGAGTACATACACAATGGC
GGATTTAAGAAATATGTTCCATTGTTGGAGGAAGTTGTGGTTTTGGAAGGTGCAGCTCAC
TTTGTCAATCAAGAAAGGCCACATGAGATTAGCAAGCACATTTATGACTTCATTCAAAAG
TTCTAA