Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060245
CDS Infomation

pacid=37443477 polypeptide=PGSC0003DMP400040539 locus=PGSC0003DMG400023436 ID=PGSC0003DMT400060245.v4.03 annot-version=v4.03
Sequence

ATGGCGAATCGGACTTCGGATCTTGCCGGACGGGTCGACCCGGCTCAGAGTTTCGACATT
GAAGCTCTTCTTCGCTATGCATCTGCTAATGTTCATGGATTCCCTTCAAATATCTCTAAT
TTCACTCTTTCTCAGTTTGGGCATGGCCAATCAAATCCTACTTTTCTCATTGAGGCTCGT
TCAGGAACTTTTGCTAAGAAATATGTGTTGAGGAAGAAACCGCATGGAAAGTTGCTGGCA
TCTGCTCATGCTGTTGAGAGAGAGTATGAGGTTCTACATGCACTAGGTACTCATACTCAG
GTTCCAGTCCCCAAAGTATTTTGTTTGTGTACAGATTCAAGTGTGATTGGGACTCCGTTT
TACATTATGGAGTATTTGGAAGGACGTATATTTATTGACCCAAACCTACCTGATGTATCG
CCTAAGAGAAGGAGGGATATATGTCGTGCGGTTTCTCAAGCGTTGGCCTCCGTTCACTCT
GCCAATGTTGATGCAATCGGTTTAGGTAACTACGGGAAGCGGAAAGACTACTGTAAGAGA
CAGGTAGAGAGGTGGGCCAAACAATATCTTCTATCTACTGGCGAGGGCAAGTCCAGGAGA
AACCCTAAAATGTTAGAGCTGGTTGATTGGTTGCGACAACATATTCCCCTTGAAGATTCC
TTAGGGGAAACAGCTGGTTTAGTACATGGTGACTTTCGGATTGACAATGTTGTGTTTCAT
CCCACAGAGGACAGAGTCATAGGAATTCTTGATTGGGAGCTGTCGACTTTGGGTAATCAG
ATGTCTGATGTTGCTTACAGCTGCTTGAGCTACTTTGTGAATATTTCATTAGAAGATCTA
GACGGGAGTGATGGCTTTGAGCGCAGCAGCTTCCCTGAAGGAATACCTTCTCTTCCAGAA
TACCTTGCAGATTACTGCTCAGCTGCTGGAAGACCTTGGCCGGTTGATCAGTGGAAGTTC
TACATTGCCTTTTCTTTGTTTCGTGGGGCTTCAATATTTGCTGGTATACACAGCAGATGG
ATCATGGGTAATGCTTCTGGAGGTGAACGTGCCCGGTTTGCCGGGGAAAAGGCTGATTCC
TTCATCAAAACTGCATGGTTATTTATTCAAAGAAAATCTGTTCTCCCCCTTCACCCACCA
TCTGAAACAACTAGAGAGGATAATATTGGGATTTTTGGAAGTGAAAGCCAAATTCAAGTA
ACACCTACGAGTGGGAAATTTGTGCCTAGTGAGAAGGTTCAAGATCTGAGAGACAAATTG
ATAAAGTTCATGGAGGATCATATATATCCAAAAGAAAGTGACTTTTACAAGCTTGCACAG
TCTACCATGCGCTGGACAATTCACCCAGACGAGGAGAAGTTAAAGGATCTGGCAAAAAGA
GAAGGCCTTTGGAACCTGTGGATACCGTTTGATAGTGCTGCACGGGCAAGAGAAGTGATC
TTTGGCAGCGGAAATGATTCTCTAGTTGAAAACAAATTCAATCGCTTATTAGGTGCTGGC
CTTTCGAACCTCGAGTATGGATATCTTTGTGAAATTATGGGTCGTTCTATTTGTGCGCCA
CAGATTTTCAACTGTGGGGCGCCTGATACAGGAAATATGGAGGTATTACTTCGGTATGGG
AATGAGGAACAGATAAAGGAATGGCTTGTCCCCTTGCTTGAGGGAAAGACACGGTCTGGC
TTTGCAATGACAGAGCCACAAGTTGCTTCCTCAGATGCCACTAATATAGAATGTTCCATC
AAAAGACATGGAGACTCTTATATCATCAATGGGAAGAAGTGGTGGACCAGTGGAGCCATG
GATCCGAGGTGCAAACTTCTCATTGTGATGGGAAAAACTGACTTAACTGCTCCTAAGCAT
AAACAACAATCCATGATCTTGGTAGACATTAATACTCCAGGTATTATGATAAAGAGACCG
CTGACAGTATTTGGCTTTGACGATGCACCTCATGGGCATGCGGAAATATTCTTTGAGAAT
GTATCCGTCCCTGCGAACAATATTCTACTCGGAGAGGGGCGTGGCTTTGAGATTGCCCAG
GGTAGGCTAGGCCCCGGAAGGTTGCATCATTGCATGAGACTAATAGGTGCAGCTGAACGC
GGCATGCAGATGATGGTTCAACGGGCTCTTGAAAGACGAGCTTTTGGAAAATTAATTGCC
GAACACGGTGCATTCCTTTCTGATGTTGCCAAATGTCGAATTGAACTAGAGAAAACCAGA
TTACTGGTTCTGGAAGCTGCTGATCAGCTTGACCGCCTCGGAAACAAAAAGGCTCGTGCT
ACAATCGCGATGGCAAAGGTTGCTGCACCAAACATGGCATTGATGGTTCTCGATACTGCA
ATGCAAGTGCACGGTGCTGCTGGTGTATCGGGTGATACTGTTCTTGCTCATCTCTGGGCT
ACTGCTAGGACATTGAGAATTGCAGATGGTCCTGATGAAGTACACTTGGGGACAATCGCG
AAAACTGAGTTAAGGAAATCCAGGCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040539
PEP Infomation

pacid=37443477 transcript=PGSC0003DMT400060245 locus=PGSC0003DMG400023436 ID=PGSC0003DMT400060245.v4.03 annot-version=v4.03
Sequence

MANRTSDLAGRVDPAQSFDIEALLRYASANVHGFPSNISNFTLSQFGHGQSNPTFLIEAR
SGTFAKKYVLRKKPHGKLLASAHAVEREYEVLHALGTHTQVPVPKVFCLCTDSSVIGTPF
YIMEYLEGRIFIDPNLPDVSPKRRRDICRAVSQALASVHSANVDAIGLGNYGKRKDYCKR
QVERWAKQYLLSTGEGKSRRNPKMLELVDWLRQHIPLEDSLGETAGLVHGDFRIDNVVFH
PTEDRVIGILDWELSTLGNQMSDVAYSCLSYFVNISLEDLDGSDGFERSSFPEGIPSLPE
YLADYCSAAGRPWPVDQWKFYIAFSLFRGASIFAGIHSRWIMGNASGGERARFAGEKADS
FIKTAWLFIQRKSVLPLHPPSETTREDNIGIFGSESQIQVTPTSGKFVPSEKVQDLRDKL
IKFMEDHIYPKESDFYKLAQSTMRWTIHPDEEKLKDLAKREGLWNLWIPFDSAARAREVI
FGSGNDSLVENKFNRLLGAGLSNLEYGYLCEIMGRSICAPQIFNCGAPDTGNMEVLLRYG
NEEQIKEWLVPLLEGKTRSGFAMTEPQVASSDATNIECSIKRHGDSYIINGKKWWTSGAM
DPRCKLLIVMGKTDLTAPKHKQQSMILVDINTPGIMIKRPLTVFGFDDAPHGHAEIFFEN
VSVPANNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQMMVQRALERRAFGKLIA
EHGAFLSDVAKCRIELEKTRLLVLEAADQLDRLGNKKARATIAMAKVAAPNMALMVLDTA
MQVHGAAGVSGDTVLAHLWATARTLRIADGPDEVHLGTIAKTELRKSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400060245
Transcript Infomation

pacid=37443477 locus=PGSC0003DMG400023436 ID=PGSC0003DMT400060245.v4.03 annot-version=v4.03
Sequence

ATGGCGAATCGGACTTCGGATCTTGCCGGACGGGTCGACCCGGCTCAGAGTTTCGACATT
GAAGCTCTTCTTCGCTATGCATCTGCTAATGTTCATGGATTCCCTTCAAATATCTCTAAT
TTCACTCTTTCTCAGTTTGGGCATGGCCAATCAAATCCTACTTTTCTCATTGAGGCTCGT
TCAGGAACTTTTGCTAAGAAATATGTGTTGAGGAAGAAACCGCATGGAAAGTTGCTGGCA
TCTGCTCATGCTGTTGAGAGAGAGTATGAGGTTCTACATGCACTAGGTACTCATACTCAG
GTTCCAGTCCCCAAAGTATTTTGTTTGTGTACAGATTCAAGTGTGATTGGGACTCCGTTT
TACATTATGGAGTATTTGGAAGGACGTATATTTATTGACCCAAACCTACCTGATGTATCG
CCTAAGAGAAGGAGGGATATATGTCGTGCGGTTTCTCAAGCGTTGGCCTCCGTTCACTCT
GCCAATGTTGATGCAATCGGTTTAGGTAACTACGGGAAGCGGAAAGACTACTGTAAGAGA
CAGGTAGAGAGGTGGGCCAAACAATATCTTCTATCTACTGGCGAGGGCAAGTCCAGGAGA
AACCCTAAAATGTTAGAGCTGGTTGATTGGTTGCGACAACATATTCCCCTTGAAGATTCC
TTAGGGGAAACAGCTGGTTTAGTACATGGTGACTTTCGGATTGACAATGTTGTGTTTCAT
CCCACAGAGGACAGAGTCATAGGAATTCTTGATTGGGAGCTGTCGACTTTGGGTAATCAG
ATGTCTGATGTTGCTTACAGCTGCTTGAGCTACTTTGTGAATATTTCATTAGAAGATCTA
GACGGGAGTGATGGCTTTGAGCGCAGCAGCTTCCCTGAAGGAATACCTTCTCTTCCAGAA
TACCTTGCAGATTACTGCTCAGCTGCTGGAAGACCTTGGCCGGTTGATCAGTGGAAGTTC
TACATTGCCTTTTCTTTGTTTCGTGGGGCTTCAATATTTGCTGGTATACACAGCAGATGG
ATCATGGGTAATGCTTCTGGAGGTGAACGTGCCCGGTTTGCCGGGGAAAAGGCTGATTCC
TTCATCAAAACTGCATGGTTATTTATTCAAAGAAAATCTGTTCTCCCCCTTCACCCACCA
TCTGAAACAACTAGAGAGGATAATATTGGGATTTTTGGAAGTGAAAGCCAAATTCAAGTA
ACACCTACGAGTGGGAAATTTGTGCCTAGTGAGAAGGTTCAAGATCTGAGAGACAAATTG
ATAAAGTTCATGGAGGATCATATATATCCAAAAGAAAGTGACTTTTACAAGCTTGCACAG
TCTACCATGCGCTGGACAATTCACCCAGACGAGGAGAAGTTAAAGGATCTGGCAAAAAGA
GAAGGCCTTTGGAACCTGTGGATACCGTTTGATAGTGCTGCACGGGCAAGAGAAGTGATC
TTTGGCAGCGGAAATGATTCTCTAGTTGAAAACAAATTCAATCGCTTATTAGGTGCTGGC
CTTTCGAACCTCGAGTATGGATATCTTTGTGAAATTATGGGTCGTTCTATTTGTGCGCCA
CAGATTTTCAACTGTGGGGCGCCTGATACAGGAAATATGGAGGTATTACTTCGGTATGGG
AATGAGGAACAGATAAAGGAATGGCTTGTCCCCTTGCTTGAGGGAAAGACACGGTCTGGC
TTTGCAATGACAGAGCCACAAGTTGCTTCCTCAGATGCCACTAATATAGAATGTTCCATC
AAAAGACATGGAGACTCTTATATCATCAATGGGAAGAAGTGGTGGACCAGTGGAGCCATG
GATCCGAGGTGCAAACTTCTCATTGTGATGGGAAAAACTGACTTAACTGCTCCTAAGCAT
AAACAACAATCCATGATCTTGGTAGACATTAATACTCCAGGTATTATGATAAAGAGACCG
CTGACAGTATTTGGCTTTGACGATGCACCTCATGGGCATGCGGAAATATTCTTTGAGAAT
GTATCCGTCCCTGCGAACAATATTCTACTCGGAGAGGGGCGTGGCTTTGAGATTGCCCAG
GGTAGGCTAGGCCCCGGAAGGTTGCATCATTGCATGAGACTAATAGGTGCAGCTGAACGC
GGCATGCAGATGATGGTTCAACGGGCTCTTGAAAGACGAGCTTTTGGAAAATTAATTGCC
GAACACGGTGCATTCCTTTCTGATGTTGCCAAATGTCGAATTGAACTAGAGAAAACCAGA
TTACTGGTTCTGGAAGCTGCTGATCAGCTTGACCGCCTCGGAAACAAAAAGGCTCGTGCT
ACAATCGCGATGGCAAAGGTTGCTGCACCAAACATGGCATTGATGGTTCTCGATACTGCA
ATGCAAGTGCACGGTGCTGCTGGTGTATCGGGTGATACTGTTCTTGCTCATCTCTGGGCT
ACTGCTAGGACATTGAGAATTGCAGATGGTCCTGATGAAGTACACTTGGGGACAATCGCG
AAAACTGAGTTAAGGAAATCCAGGCTTTGA