Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060234
CDS Infomation

pacid=37443877 polypeptide=PGSC0003DMP400040529 locus=PGSC0003DMG400023432 ID=PGSC0003DMT400060234.v4.03 annot-version=v4.03
Sequence

ATGGTGTATAAGAAGAAGTTAGATTTTGGTTTCAATGGCTTTCAAGTTCCAGTTATACCT
AAAGCTCCTAGATCAGTTAGAAGGAGACGTTCCTGTAAAAAATTGGATGATGATCAAATT
TGTGCATTTGAATTATTGGCGGCTGTTGCCGGGAAGCTTTTACTGGAGAGCGAAAGCTCT
ACTTCCAGTAATGCAGCAGAAGGGAAAAATGAAATTGCTGATGGCAGGGATGGTATTAAA
AGTGAACAAGTGGAAGAAGGTAAAGCTGTGAAATCAGAGTACCTCGACCAGGGGAGTTGT
GTAGAAAGCGATTATATACCCGAAACTGCAGCCCAAGATCAGAATTTGAAACATGGTTTC
GATAAGCCTCATCATGCAGAAAATAATTATTTCTTGGAGCATACTTCTATTGTTATAGGC
TCTGACGCTGACTTGAAGTTGGAAAACTGCAAGGAGGTCAATATACCTGATGGAAAATTC
CACCCCAAAATTGAAGGTGGATCCTCTAGTCTTGAAGATCCATGTGATGGTAAAATCAGG
ACAGGAATTCAAAAGCACTTAGATGATGACAGCAAGCAGATAGAGGACGTAACTGTGACT
AACACTTGTAGTGTAAAGAATCCAATCGAAGAATGTGTTAATAACAGTGGTTTGTTTAAC
TCAGACGGTAGTGTACAGTTACCCTTGTACAGGGATTCGGTTCCTAGTGCTTCTTTTGTA
AAGCACAGGAACAGTGTAAAGTTAGGTATTAGAGATGATGACGAAAATTCTTTTGACTGC
TATAGATATAGCACCAAGTTAAGGGCCTTTAGGACGACATCACGACTTGGATACAGAAGA
ATAAGGAAGATGCTGAAATCTCGACACTGGAAAGCAGCTCCTAAGTTGAAGGAATATGAG
CGATCTTACACAAATGGTGGAGTGGAGTCCTTTTACCTCAGTAGGAAAAGTGTACGTGCA
CGCAAGAGATGCCAACTTGAAGTTCCTTCCAAGAGACGGAAATTGAGCAACCATGGCTTT
GCTGTTGCATATTACCAGGAGGCCAGTAGTGAAAGCGTGACAAATTCACCTGACAAGGAA
ATCAAACGAGACATTAATACCTCCCATGCCATCCCACCGAGAGGAACTACTGATCCAGCT
CCAGTTAACAATCATCACAAAAAGGACCCTAATGTAAAATTTAGCATCAAGTCCTTCAAG
GTGCCAGAGCTTTACATAGAGGTTCCTGAAACTGCAACAGTTGGCTCGCTGAAGAGAACG
GTTATGGAGGCAGTTACCGCTATACTGGAAAGTGGATTACGGGTTGGGGTGGTTCTCCAG
GGAAAGAAGGTCAGAGATGACAATAGAACACTGGAGCAGGCTGGCATTTCCCAGAACGGC
AACCTCGATAATTTGGGTTTCACTTTGGAGCCTAGATTCACCCAAGTTTCTCCATCATCA
TCTCCTAATAAACTTCTGGCTTCATCAACATATGCTGCAGATCAGGAACTAACAAGGCGG
CGACCTAGTCCTATATTGGAATTGGGGATTCACAACGCTTCAGCAGACCCTCTAGAGACT
GAGATGTGCAAGTACAACGAGAATAACCATCCATCAGAGCTATCTCCTACAAATCCTATT
GATTCATCAACTGATGTATCTATTCCAGATTCTAGAGCCTTGGTGATAGTTCCTTCAGTT
AATGCAGAGGCACTTGCTATGGTTCCGCTGAACCAAAAAAGTAAACGTTCTGAACTTTCA
CAACGTAGAATACGGAGACCATTCTCAGTTGCAGAAGTAGAGGCACTAGTTGAAGCTGTG
GAGCATCTTGGAACTGGAAGGTGGCGTGATGTTAAAATGCGTGCTTTTGATAATGCTGAT
CACCGAACCTACGTCGACTTGAAGGATAAATGGAAGACATTAGTACATACAGCAAGCATT
GCCCCGCAACAACGAAGAGGCGAGCCTGTTCCCCAGGAACTTCTGGACAGAGTCTTAGCT
GCCCATGCCTACTGGTCTCAACAACAGGGGAAACATCATGCTGAACCTCTGAAAACTCCA
GATGCAAAAGCACTGAAAGTTGGCGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040529
PEP Infomation

pacid=37443877 transcript=PGSC0003DMT400060234 locus=PGSC0003DMG400023432 ID=PGSC0003DMT400060234.v4.03 annot-version=v4.03
Sequence

MVYKKKLDFGFNGFQVPVIPKAPRSVRRRRSCKKLDDDQICAFELLAAVAGKLLLESESS
TSSNAAEGKNEIADGRDGIKSEQVEEGKAVKSEYLDQGSCVESDYIPETAAQDQNLKHGF
DKPHHAENNYFLEHTSIVIGSDADLKLENCKEVNIPDGKFHPKIEGGSSSLEDPCDGKIR
TGIQKHLDDDSKQIEDVTVTNTCSVKNPIEECVNNSGLFNSDGSVQLPLYRDSVPSASFV
KHRNSVKLGIRDDDENSFDCYRYSTKLRAFRTTSRLGYRRIRKMLKSRHWKAAPKLKEYE
RSYTNGGVESFYLSRKSVRARKRCQLEVPSKRRKLSNHGFAVAYYQEASSESVTNSPDKE
IKRDINTSHAIPPRGTTDPAPVNNHHKKDPNVKFSIKSFKVPELYIEVPETATVGSLKRT
VMEAVTAILESGLRVGVVLQGKKVRDDNRTLEQAGISQNGNLDNLGFTLEPRFTQVSPSS
SPNKLLASSTYAADQELTRRRPSPILELGIHNASADPLETEMCKYNENNHPSELSPTNPI
DSSTDVSIPDSRALVIVPSVNAEALAMVPLNQKSKRSELSQRRIRRPFSVAEVEALVEAV
EHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQELLDRVLA
AHAYWSQQQGKHHAEPLKTPDAKALKVGA*

Transcript Sequence

Transcript ID

PGSC0003DMT400060234
Transcript Infomation

pacid=37443877 locus=PGSC0003DMG400023432 ID=PGSC0003DMT400060234.v4.03 annot-version=v4.03
Sequence

ATGGTGTATAAGAAGAAGTTAGATTTTGGTTTCAATGGCTTTCAAGTTCCAGTTATACCT
AAAGCTCCTAGATCAGTTAGAAGGAGACGTTCCTGTAAAAAATTGGATGATGATCAAATT
TGTGCATTTGAATTATTGGCGGCTGTTGCCGGGAAGCTTTTACTGGAGAGCGAAAGCTCT
ACTTCCAGTAATGCAGCAGAAGGGAAAAATGAAATTGCTGATGGCAGGGATGGTATTAAA
AGTGAACAAGTGGAAGAAGGTAAAGCTGTGAAATCAGAGTACCTCGACCAGGGGAGTTGT
GTAGAAAGCGATTATATACCCGAAACTGCAGCCCAAGATCAGAATTTGAAACATGGTTTC
GATAAGCCTCATCATGCAGAAAATAATTATTTCTTGGAGCATACTTCTATTGTTATAGGC
TCTGACGCTGACTTGAAGTTGGAAAACTGCAAGGAGGTCAATATACCTGATGGAAAATTC
CACCCCAAAATTGAAGGTGGATCCTCTAGTCTTGAAGATCCATGTGATGGTAAAATCAGG
ACAGGAATTCAAAAGCACTTAGATGATGACAGCAAGCAGATAGAGGACGTAACTGTGACT
AACACTTGTAGTGTAAAGAATCCAATCGAAGAATGTGTTAATAACAGTGGTTTGTTTAAC
TCAGACGGTAGTGTACAGTTACCCTTGTACAGGGATTCGGTTCCTAGTGCTTCTTTTGTA
AAGCACAGGAACAGTGTAAAGTTAGGTATTAGAGATGATGACGAAAATTCTTTTGACTGC
TATAGATATAGCACCAAGTTAAGGGCCTTTAGGACGACATCACGACTTGGATACAGAAGA
ATAAGGAAGATGCTGAAATCTCGACACTGGAAAGCAGCTCCTAAGTTGAAGGAATATGAG
CGATCTTACACAAATGGTGGAGTGGAGTCCTTTTACCTCAGTAGGAAAAGTGTACGTGCA
CGCAAGAGATGCCAACTTGAAGTTCCTTCCAAGAGACGGAAATTGAGCAACCATGGCTTT
GCTGTTGCATATTACCAGGAGGCCAGTAGTGAAAGCGTGACAAATTCACCTGACAAGGAA
ATCAAACGAGACATTAATACCTCCCATGCCATCCCACCGAGAGGAACTACTGATCCAGCT
CCAGTTAACAATCATCACAAAAAGGACCCTAATGTAAAATTTAGCATCAAGTCCTTCAAG
GTGCCAGAGCTTTACATAGAGGTTCCTGAAACTGCAACAGTTGGCTCGCTGAAGAGAACG
GTTATGGAGGCAGTTACCGCTATACTGGAAAGTGGATTACGGGTTGGGGTGGTTCTCCAG
GGAAAGAAGGTCAGAGATGACAATAGAACACTGGAGCAGGCTGGCATTTCCCAGAACGGC
AACCTCGATAATTTGGGTTTCACTTTGGAGCCTAGATTCACCCAAGTTTCTCCATCATCA
TCTCCTAATAAACTTCTGGCTTCATCAACATATGCTGCAGATCAGGAACTAACAAGGCGG
CGACCTAGTCCTATATTGGAATTGGGGATTCACAACGCTTCAGCAGACCCTCTAGAGACT
GAGATGTGCAAGTACAACGAGAATAACCATCCATCAGAGCTATCTCCTACAAATCCTATT
GATTCATCAACTGATGTATCTATTCCAGATTCTAGAGCCTTGGTGATAGTTCCTTCAGTT
AATGCAGAGGCACTTGCTATGGTTCCGCTGAACCAAAAAAGTAAACGTTCTGAACTTTCA
CAACGTAGAATACGGAGACCATTCTCAGTTGCAGAAGTAGAGGCACTAGTTGAAGCTGTG
GAGCATCTTGGAACTGGAAGGTGGCGTGATGTTAAAATGCGTGCTTTTGATAATGCTGAT
CACCGAACCTACGTCGACTTGAAGGATAAATGGAAGACATTAGTACATACAGCAAGCATT
GCCCCGCAACAACGAAGAGGCGAGCCTGTTCCCCAGGAACTTCTGGACAGAGTCTTAGCT
GCCCATGCCTACTGGTCTCAACAACAGGGGAAACATCATGCTGAACCTCTGAAAACTCCA
GATGCAAAAGCACTGAAAGTTGGCGCTTGA