Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060211
CDS Infomation

pacid=37442931 polypeptide=PGSC0003DMP400040513 locus=PGSC0003DMG400023422 ID=PGSC0003DMT400060211.v4.03 annot-version=v4.03
Sequence

ATGGCATGTAGAGTTCAACATTCAATTCAGAGCAGTTTTTGGTTCTTATCTTCAGCCCCT
TTACGAAATTCGTTGAACCCAAGAAGGATTTTTTTCAAGAATCGAATTAGTTTTGGCAAA
GAATTGTTTTTTTCATCTTCTTCAAGAACTGCCCTTTACTGCACTTGCAGCAGCAGTAGT
AGTAGTGGAGGTGATAAAGATGGTTTTTTGGCAAATGGGGTTGGGGGTGATGATTCTTTT
GTACTCACAACTCCACTTTATTATGTTAATGCTCCTCCTCATATGGGGAGTGCTTATACT
ACCATTGCTGCTGATGCCATTGCTCGTTTTCAGAGGCTACTTGAGAAGAAAGTTATATTC
ATCACTGGCACAGATGAACATGGAGAGAAGATTGCTACTGCAGCTGCAGCTAATGGTTCT
AGCCCAAATGAACACTGTGACGTTGTATCACAAGCTTATAAATCTCTCTGGAAAGATTTA
GACATAAGTTATGACAAGTTTATCAGAACAACTGATCCAAAGCATGAAGCTGTTGTGAAG
GAATTTTACTCTCGGGTTCTTGCAAATGGTGACATATACAGGGCTGATTATGAGGGACTT
TATTGTGTCAATTGTGAGGAGTACAAGGACGAGAAGGATTTGCTGGATGATAACTGTTGT
CCTACGCACTTAAAGCCATGTGTGAAAAGAAAAGAAGATAATTACTTCTTTGCCTTGTCA
AAGTATCAACAACAATTGGAAGAAGTTTTAAAGCAAAACCCTGGTTTCGTGCAGCCTTCT
TATCGTCTAAATGAGGTTCAAGGTTGGATTAAAAATGGCCTGAAAGATTTCTCCATCTCC
CGAGCATCAGTAGATTGGGGTATTGCTGTTCCTAATGATTCGAAGCAGACTATATATGTC
TGGTTTGATGCTTTATTGGGTTATGTATCTGCACTTCTGGAGGATAGCGAGCTAGCCAGT
TTAGATACTGCAATTTCTTCTGGATGGCCTGCCTCGCTCCACTTAATTGGCAAGGATATA
TTGCGATTTCACGCTGTTTATTGGCCAGCGATGTTAATGTCAGCAGGAATTGGTCTCCCT
AAGATGGTATTTGGTCATGGATTCTTGACCAAGGATGGAATGAAGATGGGTAAGTCACTG
GGAAATACACTCGAGCCAACGGACTTGGTTCAGAGGTTTGGATCTGATGCAGTCAGGTAC
TTTTTCCTCAGGGAGGTAGAATTTGGTAATGACGGGGACTACTCAGAGGAACGGTTCATC
AGAATGATAAACGCAAATTTAGCTAATACAATTGGTAATCTTCTAAATCGCACACTTGGA
CTTCTGAAAAAGAACTGCCAATCAACTCTGGCCGTTGATTCAGATATTGCGGCAGAAGGA
AACGAATTCAAGGCTGCAGTGGAGAAACTGGTAGAGAAAGCATGTGTGCACTATCAAAAA
TTAGAATTATCAGCAGCTTGCGAGACTGTGCTGGAGATTGGTAATGCTGGAAATTTATAC
ATTGATGGACAAGCTCCGTGGACTCTTTTCAAGCAAGGCGGCACAGCCTTTGAAACTGCA
GCAAAGGATCTCGTAATTGTATTGGAAGCAATGAGAATCATATCAATTGCACTATCACCA
ATTACACCACGCTTGAGCTTGAAAATATATTCCCAACTTGGCTACACCGAGGAACAATTC
AACGCTGTTAGCTGGAGTGATACCAAATGGGGAGGGCTGAAGGCCGGTCAAGTAATGGCA
CAGGCAGCGCCAATCTTTGCCAGAATAGAAGATGGAACTGAAGCTGAGACCAAAAGTGCA
ACAACAAAGAAAGTTAAGAAGGAGAAGACACCTAAAAGTAAGAGTCCTGTTGAAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040513
PEP Infomation

pacid=37442931 transcript=PGSC0003DMT400060211 locus=PGSC0003DMG400023422 ID=PGSC0003DMT400060211.v4.03 annot-version=v4.03
Sequence

MACRVQHSIQSSFWFLSSAPLRNSLNPRRIFFKNRISFGKELFFSSSSRTALYCTCSSSS
SSGGDKDGFLANGVGGDDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLEKKVIF
ITGTDEHGEKIATAAAANGSSPNEHCDVVSQAYKSLWKDLDISYDKFIRTTDPKHEAVVK
EFYSRVLANGDIYRADYEGLYCVNCEEYKDEKDLLDDNCCPTHLKPCVKRKEDNYFFALS
KYQQQLEEVLKQNPGFVQPSYRLNEVQGWIKNGLKDFSISRASVDWGIAVPNDSKQTIYV
WFDALLGYVSALLEDSELASLDTAISSGWPASLHLIGKDILRFHAVYWPAMLMSAGIGLP
KMVFGHGFLTKDGMKMGKSLGNTLEPTDLVQRFGSDAVRYFFLREVEFGNDGDYSEERFI
RMINANLANTIGNLLNRTLGLLKKNCQSTLAVDSDIAAEGNEFKAAVEKLVEKACVHYQK
LELSAACETVLEIGNAGNLYIDGQAPWTLFKQGGTAFETAAKDLVIVLEAMRIISIALSP
ITPRLSLKIYSQLGYTEEQFNAVSWSDTKWGGLKAGQVMAQAAPIFARIEDGTEAETKSA
TTKKVKKEKTPKSKSPVEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400060211
Transcript Infomation

pacid=37442931 locus=PGSC0003DMG400023422 ID=PGSC0003DMT400060211.v4.03 annot-version=v4.03
Sequence

ATGGCATGTAGAGTTCAACATTCAATTCAGAGCAGTTTTTGGTTCTTATCTTCAGCCCCT
TTACGAAATTCGTTGAACCCAAGAAGGATTTTTTTCAAGAATCGAATTAGTTTTGGCAAA
GAATTGTTTTTTTCATCTTCTTCAAGAACTGCCCTTTACTGCACTTGCAGCAGCAGTAGT
AGTAGTGGAGGTGATAAAGATGGTTTTTTGGCAAATGGGGTTGGGGGTGATGATTCTTTT
GTACTCACAACTCCACTTTATTATGTTAATGCTCCTCCTCATATGGGGAGTGCTTATACT
ACCATTGCTGCTGATGCCATTGCTCGTTTTCAGAGGCTACTTGAGAAGAAAGTTATATTC
ATCACTGGCACAGATGAACATGGAGAGAAGATTGCTACTGCAGCTGCAGCTAATGGTTCT
AGCCCAAATGAACACTGTGACGTTGTATCACAAGCTTATAAATCTCTCTGGAAAGATTTA
GACATAAGTTATGACAAGTTTATCAGAACAACTGATCCAAAGCATGAAGCTGTTGTGAAG
GAATTTTACTCTCGGGTTCTTGCAAATGGTGACATATACAGGGCTGATTATGAGGGACTT
TATTGTGTCAATTGTGAGGAGTACAAGGACGAGAAGGATTTGCTGGATGATAACTGTTGT
CCTACGCACTTAAAGCCATGTGTGAAAAGAAAAGAAGATAATTACTTCTTTGCCTTGTCA
AAGTATCAACAACAATTGGAAGAAGTTTTAAAGCAAAACCCTGGTTTCGTGCAGCCTTCT
TATCGTCTAAATGAGGTTCAAGGTTGGATTAAAAATGGCCTGAAAGATTTCTCCATCTCC
CGAGCATCAGTAGATTGGGGTATTGCTGTTCCTAATGATTCGAAGCAGACTATATATGTC
TGGTTTGATGCTTTATTGGGTTATGTATCTGCACTTCTGGAGGATAGCGAGCTAGCCAGT
TTAGATACTGCAATTTCTTCTGGATGGCCTGCCTCGCTCCACTTAATTGGCAAGGATATA
TTGCGATTTCACGCTGTTTATTGGCCAGCGATGTTAATGTCAGCAGGAATTGGTCTCCCT
AAGATGGTATTTGGTCATGGATTCTTGACCAAGGATGGAATGAAGATGGGTAAGTCACTG
GGAAATACACTCGAGCCAACGGACTTGGTTCAGAGGTTTGGATCTGATGCAGTCAGGTAC
TTTTTCCTCAGGGAGGTAGAATTTGGTAATGACGGGGACTACTCAGAGGAACGGTTCATC
AGAATGATAAACGCAAATTTAGCTAATACAATTGGTAATCTTCTAAATCGCACACTTGGA
CTTCTGAAAAAGAACTGCCAATCAACTCTGGCCGTTGATTCAGATATTGCGGCAGAAGGA
AACGAATTCAAGGCTGCAGTGGAGAAACTGGTAGAGAAAGCATGTGTGCACTATCAAAAA
TTAGAATTATCAGCAGCTTGCGAGACTGTGCTGGAGATTGGTAATGCTGGAAATTTATAC
ATTGATGGACAAGCTCCGTGGACTCTTTTCAAGCAAGGCGGCACAGCCTTTGAAACTGCA
GCAAAGGATCTCGTAATTGTATTGGAAGCAATGAGAATCATATCAATTGCACTATCACCA
ATTACACCACGCTTGAGCTTGAAAATATATTCCCAACTTGGCTACACCGAGGAACAATTC
AACGCTGTTAGCTGGAGTGATACCAAATGGGGAGGGCTGAAGGCCGGTCAAGTAATGGCA
CAGGCAGCGCCAATCTTTGCCAGAATAGAAGATGGAACTGAAGCTGAGACCAAAAGTGCA
ACAACAAAGAAAGTTAAGAAGGAGAAGACACCTAAAAGTAAGAGTCCTGTTGAAGCTTAG