Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060161
CDS Infomation

pacid=37442244 polypeptide=PGSC0003DMP400040476 locus=PGSC0003DMG400023402 ID=PGSC0003DMT400060161.v4.03 annot-version=v4.03
Sequence

ATGTCCTTAACTGTTGCGAAAATCCTAACCGCCCTTGTTTCTTGCGCAACTGCAATCACC
CTTTTGACTTTGTTCCCTATGCTACTTAAAGTTAAGGTTAGAGAACTATTTTTGACTCAA
AATGTATTGGAGCTTGATCAAGAGGTTGGTATGATGAAGAAACAGAAAGAAGTGTATACT
CATGTCCGAATGCTGACACATGAAATTAGAAAGTCTCTTGATAAACATACTATATTGTAT
ACTACTTTAGTTGAGCTTTCAAAGACATTGAATCTGCAGAATTGTGCTGTTTGGATGCCA
AATGAGAATAGGTCATTGATGAACTTGACACACGGGTTAAGCCCCGGCGCTGCTGTAGAA
TACCATCGTTCACTTCCGATTGATGATCCGGATGTGTTAGAGATAACAAAGAACAAAGGA
GTGAGGATTTTGAGGCAAGATTCGGTTCTTGCATCTGCAAGCAGTGGAGGGCCTGGTGAG
CCATGTACTGTTGCAGCGATACGGATGCCGTTGCTTTGTGCTTCGGATTTCAAAGGTGGG
ACACCTGAGTTGGTTGACACTCGTTATGCTATTTTAGTTTTGGTTATTCCGAGTGCAAAT
GATGATTGGAGCCATAATGAGATGGAGATAGTGGAAGTAGTTGCTGATCAGGTGGCTGTG
GCCCTATCCCATGCGACAGTTCTTGAAGAGTCACAATTAATGAGGGAGAAACTAGAAGCG
AGGAACGGTTTGCTGCAACAGGCTAAGGAGAATGCCGTGAAGGCAAGCCAGGCAAGGAAT
TCGTTTCAGAAGGTAATGAACAATGGGATGAGACGGCCAATGCACTCGATTTTGGGTTTG
CTTTCCATACTTCAAGATGAGAACACAAGCTCTAACCAGAAGATTATTATCGACACAATG
GTGAGAACGAGCACCGTTCTGTCAAATTTAATAAATGATGCAATGGATATACCCGACAAA
GACGAAGGGAGATTCCCAGTAGAAATGATGCCGTTTCAGCTGCATTCGCTGATCAGAGAG
GCTTCTTGTCTTGTTAAGTGCCTGTGCGTTTATAAGGGCTTTGGCTTTTCCACGGATGTT
CCCAATTCTTTACCTAATCTGGTGATGGGGGATGAAAAGAGAACGTTTCAGGTTATACTT
CATATGGTGGGACATCTATTGAATATCAGCTCCGGAAGGGGGTTGGTTGTATTCAAGGTT
ATTCTGGAGAGTGGAACCGAGGGCGGGAATGATAAGCTTCAGGGAGCAAGAAAACATAGC
GTATTTGATGAATATGCTACCATAAAATTTGAGATTGAAGTTAGTCGTGGAGGTTCTCAA
ACAGATAGCTCAATCTCAACTTCTCACTTTGGCGGAAAGAAGTATAACAGCAAAGAGTTA
AAGGAAGGCATGAGTTTCAGCATGTGCAAAAAGCTTGTTCAGATGATGCAGGGAAATGTA
TGGATGCCCTCAAATACCGATGGCCATGCACAGAGGATGACTCTTATTCTCCGATTTCTT
AAACAGTCATCGTTCAGAAAACATATGTTTGAACTTGTGAATCCTTTGGATCAAGCGATT
TCAAGCTCAACGTTCAAAGGCCTCCAAGTTCTACTTGCTGATGACGACGACGTTAACAGA
ATGGTAACCAAAAAACTGCTTGAAAAACTAGGCTGCCAAGTAATTGCTGTTTCGTCTGGT
TTTCAGTGCCTAAGTGCAATGGGACATTCAACAACGTCCATCCAAGTTGTCGTTTTGGAT
CTTCACATGCCAGAAATGGACGGATTTGAAGTGACAACAAGGGTTCGGAAATTCCACAGT
CATAGTTGGCCATTGATCATAGCTTTATCTTCTACTTCAGAGGAACAAGTATGGGATAGA
TGTCTACAAGTCGGAATCAACGGTCTCATACGAAAGCCTGTTCTCCTGCAAGGAATGGCT
GAAGAACTTCAAAGAGTTTTACAAAGAGCTGGTGAAGGCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040476
PEP Infomation

pacid=37442244 transcript=PGSC0003DMT400060161 locus=PGSC0003DMG400023402 ID=PGSC0003DMT400060161.v4.03 annot-version=v4.03
Sequence

MSLTVAKILTALVSCATAITLLTLFPMLLKVKVRELFLTQNVLELDQEVGMMKKQKEVYT
HVRMLTHEIRKSLDKHTILYTTLVELSKTLNLQNCAVWMPNENRSLMNLTHGLSPGAAVE
YHRSLPIDDPDVLEITKNKGVRILRQDSVLASASSGGPGEPCTVAAIRMPLLCASDFKGG
TPELVDTRYAILVLVIPSANDDWSHNEMEIVEVVADQVAVALSHATVLEESQLMREKLEA
RNGLLQQAKENAVKASQARNSFQKVMNNGMRRPMHSILGLLSILQDENTSSNQKIIIDTM
VRTSTVLSNLINDAMDIPDKDEGRFPVEMMPFQLHSLIREASCLVKCLCVYKGFGFSTDV
PNSLPNLVMGDEKRTFQVILHMVGHLLNISSGRGLVVFKVILESGTEGGNDKLQGARKHS
VFDEYATIKFEIEVSRGGSQTDSSISTSHFGGKKYNSKELKEGMSFSMCKKLVQMMQGNV
WMPSNTDGHAQRMTLILRFLKQSSFRKHMFELVNPLDQAISSSTFKGLQVLLADDDDVNR
MVTKKLLEKLGCQVIAVSSGFQCLSAMGHSTTSIQVVVLDLHMPEMDGFEVTTRVRKFHS
HSWPLIIALSSTSEEQVWDRCLQVGINGLIRKPVLLQGMAEELQRVLQRAGEGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400060161
Transcript Infomation

pacid=37442244 locus=PGSC0003DMG400023402 ID=PGSC0003DMT400060161.v4.03 annot-version=v4.03
Sequence

ATGTCCTTAACTGTTGCGAAAATCCTAACCGCCCTTGTTTCTTGCGCAACTGCAATCACC
CTTTTGACTTTGTTCCCTATGCTACTTAAAGTTAAGGTTAGAGAACTATTTTTGACTCAA
AATGTATTGGAGCTTGATCAAGAGGTTGGTATGATGAAGAAACAGAAAGAAGTGTATACT
CATGTCCGAATGCTGACACATGAAATTAGAAAGTCTCTTGATAAACATACTATATTGTAT
ACTACTTTAGTTGAGCTTTCAAAGACATTGAATCTGCAGAATTGTGCTGTTTGGATGCCA
AATGAGAATAGGTCATTGATGAACTTGACACACGGGTTAAGCCCCGGCGCTGCTGTAGAA
TACCATCGTTCACTTCCGATTGATGATCCGGATGTGTTAGAGATAACAAAGAACAAAGGA
GTGAGGATTTTGAGGCAAGATTCGGTTCTTGCATCTGCAAGCAGTGGAGGGCCTGGTGAG
CCATGTACTGTTGCAGCGATACGGATGCCGTTGCTTTGTGCTTCGGATTTCAAAGGTGGG
ACACCTGAGTTGGTTGACACTCGTTATGCTATTTTAGTTTTGGTTATTCCGAGTGCAAAT
GATGATTGGAGCCATAATGAGATGGAGATAGTGGAAGTAGTTGCTGATCAGGTGGCTGTG
GCCCTATCCCATGCGACAGTTCTTGAAGAGTCACAATTAATGAGGGAGAAACTAGAAGCG
AGGAACGGTTTGCTGCAACAGGCTAAGGAGAATGCCGTGAAGGCAAGCCAGGCAAGGAAT
TCGTTTCAGAAGGTAATGAACAATGGGATGAGACGGCCAATGCACTCGATTTTGGGTTTG
CTTTCCATACTTCAAGATGAGAACACAAGCTCTAACCAGAAGATTATTATCGACACAATG
GTGAGAACGAGCACCGTTCTGTCAAATTTAATAAATGATGCAATGGATATACCCGACAAA
GACGAAGGGAGATTCCCAGTAGAAATGATGCCGTTTCAGCTGCATTCGCTGATCAGAGAG
GCTTCTTGTCTTGTTAAGTGCCTGTGCGTTTATAAGGGCTTTGGCTTTTCCACGGATGTT
CCCAATTCTTTACCTAATCTGGTGATGGGGGATGAAAAGAGAACGTTTCAGGTTATACTT
CATATGGTGGGACATCTATTGAATATCAGCTCCGGAAGGGGGTTGGTTGTATTCAAGGTT
ATTCTGGAGAGTGGAACCGAGGGCGGGAATGATAAGCTTCAGGGAGCAAGAAAACATAGC
GTATTTGATGAATATGCTACCATAAAATTTGAGATTGAAGTTAGTCGTGGAGGTTCTCAA
ACAGATAGCTCAATCTCAACTTCTCACTTTGGCGGAAAGAAGTATAACAGCAAAGAGTTA
AAGGAAGGCATGAGTTTCAGCATGTGCAAAAAGCTTGTTCAGATGATGCAGGGAAATGTA
TGGATGCCCTCAAATACCGATGGCCATGCACAGAGGATGACTCTTATTCTCCGATTTCTT
AAACAGTCATCGTTCAGAAAACATATGTTTGAACTTGTGAATCCTTTGGATCAAGCGATT
TCAAGCTCAACGTTCAAAGGCCTCCAAGTTCTACTTGCTGATGACGACGACGTTAACAGA
ATGGTAACCAAAAAACTGCTTGAAAAACTAGGCTGCCAAGTAATTGCTGTTTCGTCTGGT
TTTCAGTGCCTAAGTGCAATGGGACATTCAACAACGTCCATCCAAGTTGTCGTTTTGGAT
CTTCACATGCCAGAAATGGACGGATTTGAAGTGACAACAAGGGTTCGGAAATTCCACAGT
CATAGTTGGCCATTGATCATAGCTTTATCTTCTACTTCAGAGGAACAAGTATGGGATAGA
TGTCTACAAGTCGGAATCAACGGTCTCATACGAAAGCCTGTTCTCCTGCAAGGAATGGCT
GAAGAACTTCAAAGAGTTTTACAAAGAGCTGGTGAAGGCTTTTGA