Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060140
CDS Infomation

pacid=37443696 polypeptide=PGSC0003DMP400040457 locus=PGSC0003DMG400023398 ID=PGSC0003DMT400060140.v4.03 annot-version=v4.03
Sequence

ATGAACAGGAAGGAGTATTTTGAGATTCCTTGGGCTGCATTAAGGTCAATGTGTGATCCT
TCATTTGCAAAACGAGCCGTCTTTAGTCACTCCGAATACCTTCCCCATGGAAATGTCATT
ACATCTGCTGCTGCTAACATCACGGATACAGAGGTTGTAACTGCAAAAGGCGACAAAGTT
GCGTATGATTTTGCTGTTATTGCTACTGGTCACTCGGAAACTGGTGCTTACACGAAAGAT
GAGAAGTTTTCTCAATACCAAACAGATCATCAAAAGATTAAATCTGCCAGCTCCATATTA
ATAATCGGGGGAGGACAAACAGGAGTGGAACTGGCTGCTGAAATTGCTGTGGATTATCCC
GATAAGAAGGTGACGATTGTGCATAGGGGATCAATGTTGTTGGAATTTATAGGAGAAAGT
GCTAGCAATAAGGTAGTGCATTGGCTAAAATCAAGGAAGGTTGAGATCATATTGGGGCAA
TCTGTCGATGTAAATTCTGCAAAAGACGGTGTTTACAAAACATCTGGTGGACAAACTATA
GATGCTGAATGCCATTTCATTTGCATTGGAAAGCCGATAGGTTCAGGGTGGCTAAAAGAA
ACCGTCTTGAAAGGTAGTTTGGATATTCATGGAAGGTTGATGGTTGATTCTGATTTGAAG
GTCAAGGGTCGAAGCAATGTCTTTGGTATTGGAGATATTACTGATATCCCTGAACTTAAA
CTAGGATATTTGGCTCAAAGACACGCGGGGATAACTGCCAAGAACATAAGATTGTTAATG
AAGAACGCTAACGATAACAACTTGAATGTATATAAACCTGCTTTACCATTGTCGTTAATC
GCTCTAGGCAAAAAAGAAGCTGTAGCACAGTTTTACTGTTTATCGTGTATTGGACGCCTT
CCAGGGATGATAAAATCTGGAGATTTATTCGTTGGGAGGACTCGAAAGCAACTTGGTTTG
CTATCTGAACTTCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400040457
PEP Infomation

pacid=37443696 transcript=PGSC0003DMT400060140 locus=PGSC0003DMG400023398 ID=PGSC0003DMT400060140.v4.03 annot-version=v4.03
Sequence

MNRKEYFEIPWAALRSMCDPSFAKRAVFSHSEYLPHGNVITSAAANITDTEVVTAKGDKV
AYDFAVIATGHSETGAYTKDEKFSQYQTDHQKIKSASSILIIGGGQTGVELAAEIAVDYP
DKKVTIVHRGSMLLEFIGESASNKVVHWLKSRKVEIILGQSVDVNSAKDGVYKTSGGQTI
DAECHFICIGKPIGSGWLKETVLKGSLDIHGRLMVDSDLKVKGRSNVFGIGDITDIPELK
LGYLAQRHAGITAKNIRLLMKNANDNNLNVYKPALPLSLIALGKKEAVAQFYCLSCIGRL
PGMIKSGDLFVGRTRKQLGLLSELQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400060140
Transcript Infomation

pacid=37443696 locus=PGSC0003DMG400023398 ID=PGSC0003DMT400060140.v4.03 annot-version=v4.03
Sequence

ATGAACAGGAAGGAGTATTTTGAGATTCCTTGGGCTGCATTAAGGTCAATGTGTGATCCT
TCATTTGCAAAACGAGCCGTCTTTAGTCACTCCGAATACCTTCCCCATGGAAATGTCATT
ACATCTGCTGCTGCTAACATCACGGATACAGAGGTTGTAACTGCAAAAGGCGACAAAGTT
GCGTATGATTTTGCTGTTATTGCTACTGGTCACTCGGAAACTGGTGCTTACACGAAAGAT
GAGAAGTTTTCTCAATACCAAACAGATCATCAAAAGATTAAATCTGCCAGCTCCATATTA
ATAATCGGGGGAGGACAAACAGGAGTGGAACTGGCTGCTGAAATTGCTGTGGATTATCCC
GATAAGAAGGTGACGATTGTGCATAGGGGATCAATGTTGTTGGAATTTATAGGAGAAAGT
GCTAGCAATAAGGTAGTGCATTGGCTAAAATCAAGGAAGGTTGAGATCATATTGGGGCAA
TCTGTCGATGTAAATTCTGCAAAAGACGGTGTTTACAAAACATCTGGTGGACAAACTATA
GATGCTGAATGCCATTTCATTTGCATTGGAAAGCCGATAGGTTCAGGGTGGCTAAAAGAA
ACCGTCTTGAAAGGTAGTTTGGATATTCATGGAAGGTTGATGGTTGATTCTGATTTGAAG
GTCAAGGGTCGAAGCAATGTCTTTGGTATTGGAGATATTACTGATATCCCTGAACTTAAA
CTAGGATATTTGGCTCAAAGACACGCGGGGATAACTGCCAAGAACATAAGATTGTTAATG
AAGAACGCTAACGATAACAACTTGAATGTATATAAACCTGCTTTACCATTGTCGTTAATC
GCTCTAGGCAAAAAAGAAGCTGTAGCACAGTTTTACTGTTTATCGTGTATTGGACGCCTT
CCAGGGATGATAAAATCTGGAGATTTATTCGTTGGGAGGACTCGAAAGCAACTTGGTTTG
CTATCTGAACTTCAATAA