Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060106
CDS Infomation

pacid=37442158 polypeptide=PGSC0003DMP400040433 locus=PGSC0003DMG400023382 ID=PGSC0003DMT400060106.v4.03 annot-version=v4.03
Sequence

ATGCGCGAACTTCGTCAGAAGTACGGTCCTATTTTTACCCTAAGAATGGGTACTAGGACC
ATGATCATTATAAGCAACGCGGACTTAGTCCACGAAGCATTGGTCCAAAAAGGTCAGGTT
TTCGCGAGTAGACCTCGCGAAAATCCAACCAGGACCGTGTTTAGTTGTGACAAGTTTACG
GTCAATGCGGCCGTATACGGGCCGGTTTGGAGGTCACTACGGAAAAATATGGTACAAAAC
GGTCTTAGTTCAATAAAGCTAAAGGAGTTTCGGGCCGTACGAAAAAGCGCTATGGATAAG
ATGATAGAGAAAATTCGGGCCGAGGCTGATGCAAATGACGGCGTAGTTTGGGTGTTGAAA
AACTCCCGATTTGCCGTCTTCTGCATCCTACTCGCAATGTGTTTTGGGGTCGAGATGGAC
GAAAAAACTATTGAAATGATCGATCAAATGATGAAAAGTGTTTTGATTGCGCTTGATCCA
AGACTGGATGATTATTTACCAATTTTAAGCCCCTTTTTCTCTAAACAAAGAAAACGGGCC
ATGGATGTTAGAAAACAACAAATTGAAACAATTGTGCCATTTATTGAAAAACGTAAGAAG
ATTCTAGAAAGTCCAGAAATTGATGAAACTGCAGCTTCATTTTCATACCTTGACACACTT
TTTGATCTCAAAATTGAAGGTAGAAATTCAGCGCCGACGAAGCCAGAACTAGTCACATTA
TGTTCAGAGTTTCTTAACGGAGGGACAGACACAACGGCAACAGCAATAGAGTGGGCCATA
GGGAGAATTATTGAAAATCCAAGTATACAATCGCGATTATACGAAGAAATAAAAAATACT
GTTGGAGAAAATAAAGTCGATGAAAAAGACATAGAAAAAATGCCATATTTAAATGCGGTA
ATAAAAGAATTATTACGTAAGCATCCACCTACGTACATGTCATTGACCCATGCAGTAACG
GAGCCAGCTAAATTGGGCGGGTATGATATACCCACGGATGTAAATGTGGAAATTTTCTTA
CCCGGGATTTCGGATGACCCAAATTTATGGTCCGAACCCGAGAAGTTTGACCCGGATAGG
TTTTTTTTGGGTAAGGAGGACGCCGATATGACGGGTATATCGGGTGTGAAAATGATACCA
TTTGGTATGGGTCGGAGGATTTGCCCCGGTTTGAATATGGCAACAGTCCATGTGAGTTTA
ATGTTGGCCCGATTAATTCAAGAATTCGAATGGTCCGACCCGGAAAATACCCGAGTGGAT
TTTACTGAAAAATTGGAATTTACTGTGGTGATGAAAAATACTCTAAGAGCTAAAATTAAA
CCAAGAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040433
PEP Infomation

pacid=37442158 transcript=PGSC0003DMT400060106 locus=PGSC0003DMG400023382 ID=PGSC0003DMT400060106.v4.03 annot-version=v4.03
Sequence

MRELRQKYGPIFTLRMGTRTMIIISNADLVHEALVQKGQVFASRPRENPTRTVFSCDKFT
VNAAVYGPVWRSLRKNMVQNGLSSIKLKEFRAVRKSAMDKMIEKIRAEADANDGVVWVLK
NSRFAVFCILLAMCFGVEMDEKTIEMIDQMMKSVLIALDPRLDDYLPILSPFFSKQRKRA
MDVRKQQIETIVPFIEKRKKILESPEIDETAASFSYLDTLFDLKIEGRNSAPTKPELVTL
CSEFLNGGTDTTATAIEWAIGRIIENPSIQSRLYEEIKNTVGENKVDEKDIEKMPYLNAV
IKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTDVNVEIFLPGISDDPNLWSEPEKFDPDR
FFLGKEDADMTGISGVKMIPFGMGRRICPGLNMATVHVSLMLARLIQEFEWSDPENTRVD
FTEKLEFTVVMKNTLRAKIKPRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400060106
Transcript Infomation

pacid=37442158 locus=PGSC0003DMG400023382 ID=PGSC0003DMT400060106.v4.03 annot-version=v4.03
Sequence

ATGCGCGAACTTCGTCAGAAGTACGGTCCTATTTTTACCCTAAGAATGGGTACTAGGACC
ATGATCATTATAAGCAACGCGGACTTAGTCCACGAAGCATTGGTCCAAAAAGGTCAGGTT
TTCGCGAGTAGACCTCGCGAAAATCCAACCAGGACCGTGTTTAGTTGTGACAAGTTTACG
GTCAATGCGGCCGTATACGGGCCGGTTTGGAGGTCACTACGGAAAAATATGGTACAAAAC
GGTCTTAGTTCAATAAAGCTAAAGGAGTTTCGGGCCGTACGAAAAAGCGCTATGGATAAG
ATGATAGAGAAAATTCGGGCCGAGGCTGATGCAAATGACGGCGTAGTTTGGGTGTTGAAA
AACTCCCGATTTGCCGTCTTCTGCATCCTACTCGCAATGTGTTTTGGGGTCGAGATGGAC
GAAAAAACTATTGAAATGATCGATCAAATGATGAAAAGTGTTTTGATTGCGCTTGATCCA
AGACTGGATGATTATTTACCAATTTTAAGCCCCTTTTTCTCTAAACAAAGAAAACGGGCC
ATGGATGTTAGAAAACAACAAATTGAAACAATTGTGCCATTTATTGAAAAACGTAAGAAG
ATTCTAGAAAGTCCAGAAATTGATGAAACTGCAGCTTCATTTTCATACCTTGACACACTT
TTTGATCTCAAAATTGAAGGTAGAAATTCAGCGCCGACGAAGCCAGAACTAGTCACATTA
TGTTCAGAGTTTCTTAACGGAGGGACAGACACAACGGCAACAGCAATAGAGTGGGCCATA
GGGAGAATTATTGAAAATCCAAGTATACAATCGCGATTATACGAAGAAATAAAAAATACT
GTTGGAGAAAATAAAGTCGATGAAAAAGACATAGAAAAAATGCCATATTTAAATGCGGTA
ATAAAAGAATTATTACGTAAGCATCCACCTACGTACATGTCATTGACCCATGCAGTAACG
GAGCCAGCTAAATTGGGCGGGTATGATATACCCACGGATGTAAATGTGGAAATTTTCTTA
CCCGGGATTTCGGATGACCCAAATTTATGGTCCGAACCCGAGAAGTTTGACCCGGATAGG
TTTTTTTTGGGTAAGGAGGACGCCGATATGACGGGTATATCGGGTGTGAAAATGATACCA
TTTGGTATGGGTCGGAGGATTTGCCCCGGTTTGAATATGGCAACAGTCCATGTGAGTTTA
ATGTTGGCCCGATTAATTCAAGAATTCGAATGGTCCGACCCGGAAAATACCCGAGTGGAT
TTTACTGAAAAATTGGAATTTACTGTGGTGATGAAAAATACTCTAAGAGCTAAAATTAAA
CCAAGAATGTAA