Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060098
CDS Infomation

pacid=37443823 polypeptide=PGSC0003DMP400040425 locus=PGSC0003DMG400023376 ID=PGSC0003DMT400060098.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAGCTCAGCTTCTTCTTCGCTAACAAATCTAAGCTACATTTCTTTCCAATAC
AAAACCCCTAAGTTCTCTACTACCTTTTCCTCGGTTGATTCTTCAAAATGTACTACTCTA
CGTATTACAGCTGATTCTGCTCCAAAAGCTCGATTTATTGGTCGCCGGAAAGAATCATTA
TCCGTTAAGCAGCTTCAACGTCCGCTAATGGAGTATATGAGCTTGCCGGCGAGCCAGTAC
TCGGTGTTGGATGCAGAAAGGATTGAACGAGTGGATGATAGTACGTTCAGGTGTTACGTG
TATAGATTCAAGTTCTTTGCATTTGAAGTATGTCCTGTTTTGTTGGTTAGAGTTGAGGAG
CAGCCTGATGGATGTTGTATCAAGTTGTTGTCTTGCAAGCTTGAGGGATCTCCTATTGTG
GTCGCTCAAAATGATAAATTTGACGCTTCTATGGTGAACAAAATATCTTATGATAGCAAG
CAAAGAGACTCACCTTTGCAGCAGCTCACTTCAGATGCTGTTATTGAGGTTAACATTGAA
ATTCCCTTTGCATTTCGAGCAATTCCAGTGCAGGCAATTGAGTCAACTGGTTCTCAGGTC
CTAGATCAGATACTAAGGATCATGCTCCCTCGGTTTATGGCACAGCTAGTGAAGGACTAT
CAAGCTTGGGCTTCAGGTGATGCTTCGAGGCAGCCTCTAGGAACTGGTCAGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040425
PEP Infomation

pacid=37443823 transcript=PGSC0003DMT400060098 locus=PGSC0003DMG400023376 ID=PGSC0003DMT400060098.v4.03 annot-version=v4.03
Sequence

MALSSASSSLTNLSYISFQYKTPKFSTTFSSVDSSKCTTLRITADSAPKARFIGRRKESL
SVKQLQRPLMEYMSLPASQYSVLDAERIERVDDSTFRCYVYRFKFFAFEVCPVLLVRVEE
QPDGCCIKLLSCKLEGSPIVVAQNDKFDASMVNKISYDSKQRDSPLQQLTSDAVIEVNIE
IPFAFRAIPVQAIESTGSQVLDQILRIMLPRFMAQLVKDYQAWASGDASRQPLGTGQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400060098
Transcript Infomation

pacid=37443823 locus=PGSC0003DMG400023376 ID=PGSC0003DMT400060098.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAGCTCAGCTTCTTCTTCGCTAACAAATCTAAGCTACATTTCTTTCCAATAC
AAAACCCCTAAGTTCTCTACTACCTTTTCCTCGGTTGATTCTTCAAAATGTACTACTCTA
CGTATTACAGCTGATTCTGCTCCAAAAGCTCGATTTATTGGTCGCCGGAAAGAATCATTA
TCCGTTAAGCAGCTTCAACGTCCGCTAATGGAGTATATGAGCTTGCCGGCGAGCCAGTAC
TCGGTGTTGGATGCAGAAAGGATTGAACGAGTGGATGATAGTACGTTCAGGTGTTACGTG
TATAGATTCAAGTTCTTTGCATTTGAAGTATGTCCTGTTTTGTTGGTTAGAGTTGAGGAG
CAGCCTGATGGATGTTGTATCAAGTTGTTGTCTTGCAAGCTTGAGGGATCTCCTATTGTG
GTCGCTCAAAATGATAAATTTGACGCTTCTATGGTGAACAAAATATCTTATGATAGCAAG
CAAAGAGACTCACCTTTGCAGCAGCTCACTTCAGATGCTGTTATTGAGGTTAACATTGAA
ATTCCCTTTGCATTTCGAGCAATTCCAGTGCAGGCAATTGAGTCAACTGGTTCTCAGGTC
CTAGATCAGATACTAAGGATCATGCTCCCTCGGTTTATGGCACAGCTAGTGAAGGACTAT
CAAGCTTGGGCTTCAGGTGATGCTTCGAGGCAGCCTCTAGGAACTGGTCAGATTTGA