Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060086
CDS Infomation

pacid=37444462 polypeptide=PGSC0003DMP400040415 locus=PGSC0003DMG400023372 ID=PGSC0003DMT400060086.v4.03 annot-version=v4.03
Sequence

ATGTTTAAGATAATAAAAAGAGGGAAGAAAAGCTCCAAAGGGGATGCTGTGGAGCCTCCG
ATACCGAGTTCATTGCCTAATGCGCCTGTTGATCATGCTTCGCGAATAGCAACGTCTGCT
GTGGCGTCACAGCATGTTACTTTGGCAAATGCCACACCAGATCCTAGTGTGGTTGAAGTT
TTGCCCTTATTGAAGGAGGTTGCGCTTTCCGAACGTCATGTTTTGTTTATCCGGAAGCTC
CAAATTTGCTGCGTGCAATTTGACTTCTCGGATACGGTGAAGTGTGCTAGACAAAAGGAG
ATCAAGAGACAAACACTCACAGAGCTTATTGATTTAGTTCAATCGGGTTCGTGTAAAATG
AATGAAATAATGCAGGAAGAGTTGGTTAGGATGATATCTACCAACCTTTTCCGGTGCCTG
CCTCCTGCTTCGCATGAGAATACTGGGTCGGAAGGTATTGAGGAAGAGGATGACATGTAT
CTGGATCCATCATGGCCGCATTTGCAACTAGTGTATGAGTTACTTTTAAGGTATGTGATG
TCGACTGAGATGGATACCAAGGTTGCCAAGCGATATCTTGACCACTCATTTGTGCTGAAA
CTGCTCGACTTGTTTGATTCAGAGGATCCTAGAGAGCGGGAGTATTTGAAGACTATCCTT
CACCGCATATATGGGAAATTCATGGTTCATAGGCCATTTATAAGGAACGGGATAAACAAT
GTATTCTACAGGTTTATATTTGAGACGGAGAGGCATAACGGTATCGGTGAATTGCTAGAG
ATTCTTGGAAGTGTAATAAATGGATTTGCTCTACCAATGAAAGAAGAGCACAAGTTGTTT
CTTGTTCGGGCACTTATTCCACTCCACAAGCCTAAATGTGTTTCTGCATATCACCATCAG
CTGTCCTACTGCATTACTCAGTTTGTTGAGAAAGATTACCGATTGGCAGATATCGTCATC
AGGGGGCTACTAAAATATTGGCCAATTACTAATTGCGGAAAGGAGGTTCTCTTTCTTAAT
GAACTGGAAGAAGTTCTGGAAGGTACACAGCCTGCTGAATTTCAGCGCTGTTTAGTTCCC
CTTTTCAAGCAACTTGGACGAAGCATCAATAGTCCCCATTTTCAGGTTGCTGAGCGAGCT
CTGTTCTTATGGAACAATGAGCATATAGTAGACTTGATCGCTCAGAATCGACGTGCAATT
TTGCCAATCATCTTTGAGCCATTAGAAAGGAATATGTATGGTCACTGGAATCAGGCAGTC
CACGGGTTGACCTCTAATGTCCGGAGAATGTTCTTGGAGATGGATTCAGAACTTTTTGAG
GAGTGTGAAAAGGAATACAATGAAAAGGCAGCTGGTGCCAGCAGCCTTGTGGAGCAGCGT
GAGCGAGCTTGGAAAAAATTGGAAGAAGCTGCTTCAATGGTCGGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040415
PEP Infomation

pacid=37444462 transcript=PGSC0003DMT400060086 locus=PGSC0003DMG400023372 ID=PGSC0003DMT400060086.v4.03 annot-version=v4.03
Sequence

MFKIIKRGKKSSKGDAVEPPIPSSLPNAPVDHASRIATSAVASQHVTLANATPDPSVVEV
LPLLKEVALSERHVLFIRKLQICCVQFDFSDTVKCARQKEIKRQTLTELIDLVQSGSCKM
NEIMQEELVRMISTNLFRCLPPASHENTGSEGIEEEDDMYLDPSWPHLQLVYELLLRYVM
STEMDTKVAKRYLDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRNGINN
VFYRFIFETERHNGIGELLEILGSVINGFALPMKEEHKLFLVRALIPLHKPKCVSAYHHQ
LSYCITQFVEKDYRLADIVIRGLLKYWPITNCGKEVLFLNELEEVLEGTQPAEFQRCLVP
LFKQLGRSINSPHFQVAERALFLWNNEHIVDLIAQNRRAILPIIFEPLERNMYGHWNQAV
HGLTSNVRRMFLEMDSELFEECEKEYNEKAAGASSLVEQRERAWKKLEEAASMVG*

Transcript Sequence

Transcript ID

PGSC0003DMT400060086
Transcript Infomation

pacid=37444462 locus=PGSC0003DMG400023372 ID=PGSC0003DMT400060086.v4.03 annot-version=v4.03
Sequence

ATGTTTAAGATAATAAAAAGAGGGAAGAAAAGCTCCAAAGGGGATGCTGTGGAGCCTCCG
ATACCGAGTTCATTGCCTAATGCGCCTGTTGATCATGCTTCGCGAATAGCAACGTCTGCT
GTGGCGTCACAGCATGTTACTTTGGCAAATGCCACACCAGATCCTAGTGTGGTTGAAGTT
TTGCCCTTATTGAAGGAGGTTGCGCTTTCCGAACGTCATGTTTTGTTTATCCGGAAGCTC
CAAATTTGCTGCGTGCAATTTGACTTCTCGGATACGGTGAAGTGTGCTAGACAAAAGGAG
ATCAAGAGACAAACACTCACAGAGCTTATTGATTTAGTTCAATCGGGTTCGTGTAAAATG
AATGAAATAATGCAGGAAGAGTTGGTTAGGATGATATCTACCAACCTTTTCCGGTGCCTG
CCTCCTGCTTCGCATGAGAATACTGGGTCGGAAGGTATTGAGGAAGAGGATGACATGTAT
CTGGATCCATCATGGCCGCATTTGCAACTAGTGTATGAGTTACTTTTAAGGTATGTGATG
TCGACTGAGATGGATACCAAGGTTGCCAAGCGATATCTTGACCACTCATTTGTGCTGAAA
CTGCTCGACTTGTTTGATTCAGAGGATCCTAGAGAGCGGGAGTATTTGAAGACTATCCTT
CACCGCATATATGGGAAATTCATGGTTCATAGGCCATTTATAAGGAACGGGATAAACAAT
GTATTCTACAGGTTTATATTTGAGACGGAGAGGCATAACGGTATCGGTGAATTGCTAGAG
ATTCTTGGAAGTGTAATAAATGGATTTGCTCTACCAATGAAAGAAGAGCACAAGTTGTTT
CTTGTTCGGGCACTTATTCCACTCCACAAGCCTAAATGTGTTTCTGCATATCACCATCAG
CTGTCCTACTGCATTACTCAGTTTGTTGAGAAAGATTACCGATTGGCAGATATCGTCATC
AGGGGGCTACTAAAATATTGGCCAATTACTAATTGCGGAAAGGAGGTTCTCTTTCTTAAT
GAACTGGAAGAAGTTCTGGAAGGTACACAGCCTGCTGAATTTCAGCGCTGTTTAGTTCCC
CTTTTCAAGCAACTTGGACGAAGCATCAATAGTCCCCATTTTCAGGTTGCTGAGCGAGCT
CTGTTCTTATGGAACAATGAGCATATAGTAGACTTGATCGCTCAGAATCGACGTGCAATT
TTGCCAATCATCTTTGAGCCATTAGAAAGGAATATGTATGGTCACTGGAATCAGGCAGTC
CACGGGTTGACCTCTAATGTCCGGAGAATGTTCTTGGAGATGGATTCAGAACTTTTTGAG
GAGTGTGAAAAGGAATACAATGAAAAGGCAGCTGGTGCCAGCAGCCTTGTGGAGCAGCGT
GAGCGAGCTTGGAAAAAATTGGAAGAAGCTGCTTCAATGGTCGGGTAG