Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060046
CDS Infomation

pacid=37445400 polypeptide=PGSC0003DMP400040393 locus=PGSC0003DMG400023361 ID=PGSC0003DMT400060046.v4.03 annot-version=v4.03
Sequence

ATGAAGGTTATTGAGAAAATTCAAGAATCTGTGAAAGATGACAGAGTAGTTTTCTCTTTT
GAGTTTTTTCCACCAAAAACTGAAGATGGGGTTGATAATTTGTTTGAAAGAATGGAAAGA
ATGGTGTCACATAACCCATCTTTTTGTGATATTACATGGGGTGCTGGTGGTTCAACAGCA
GATCTGACTCTTGAAATTTCAAATAGGATGCAGAATATGGTGTGTGTTGAGACAATGATG
CATTTGACTTGTACAAATATGCCTGTTGAGAAAATTGATCATGCTCTTGAAACTATTAAG
TCTAATGGGATTCAAAATGTTCTCGCTCTTCGTGGAGATCCTCCTCATGGACAAGATAAG
TTTGTTCAAGTTGAAGGTGGTTTTGCTTGTGCTTTAGATCTGGTAAAGCACATGCGGGCC
AAGTATGGGGATTACTTTGGGATCACTGTTGCGGGTTACCCTGAGGCGCATCCTGATGTT
ATACCTGCAACTGGACTAGCTACACTTGAGACATACGAAAACGAACTTGCCTATCTCAAA
CAAAAGGTTGATGCTGGAGCTGATCTCATTGTAACTCAACTCTTCTATGATACTGATAAT
TTCCTCAAGTTTGTCAGTGATTGTCGTCAAATTGGGATAACTTGTCCCATTGTTCCAGGA
ATCATGCCCATCAACAATTATAAGGGCTTCTTGCGCATGACTGGATTTTGCAAAACTAGG
ATCCCGGCAGAGATTACAGCTGCCTTGGAACCTATTAAGGATAACGAAGAGGCTGTCAAA
GCATATGGAATTCACCTTGGAACTGAAATGTGCAAGAAAATTATGGCCAGTGGCATTAAG
ACATTGCATCTTTATACATTAAACATGGAGAAATCAGCATTGGCCATTTTGATGAATCTT
GGATTGATTGAAGAGTCCAAAATTTCAAGGCCATTACCTTGGAGACGTCCTACAAATGTT
TTCCGTATCAAAGAAGATGTCCGTCCTATATTCTGGGCCAACCGTCCGAAGAGCTACATC
TCAAGAACCATTGGTTGGGATGAGTTTCCACATGGCCGATGGGGCAATGCTAAAAATCCG
TCATATGGAGCACTTAGTGATTATCAGTTCATGCGGGCACGCTCACGTGATAAGAAACTT
CAAGAGGAATGGGCTATTGCTCTCAATAGTGTGGAAGACATCTATGAGAGATTTATGAAC
TACTGTCTCGGGAAGCTGAGAAGTTGTCCTTGGTCTGAGTTAGATGGGCTTCAGGCAGAG
ACAAAGATCATCGATGATCACTTGGGTAATATAAACTCGAAAGGTTTCCTGACTATTAAC
AGCCAACCATCAGTTAATGGTGCAAAGTCCGACGCTCCTTTAGTTGGATGGGGTGGTCCT
GGTGGATTTGTTTATCAAAAGGCATACTTAGAGTTCTTTTGCTCGCGTGAGAAGTTAAAT
GCTGTTATCGAAAAATGCATGGCTTTCCCCTTCCTTACCTACATGGCTGTGAACAAGAAA
GGAAACTGGATGTCCAACGTCAACCAAGTCGACGTCAATGCAGTGACATGGGGCGTCTTC
CCAGCTAAGGAGATTGTACAACCAACCGTCGTTGATCCTGCCAGCTTCATGGTATGGAAA
GACGAGGCATTTGAAATCTGGTCACGAGGTTGGGCTCAATTATACCCCGAGAATGATCCA
TCTAGAACATTACTCGAACAGGTTCAAAACAGTTACTTCTTGGTCAGCCTTGTCGATAAC
GATTACATCAATGGAGATTTGTTTGCCATCTTCAAGGATATGATCTGGAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040393
PEP Infomation

pacid=37445400 transcript=PGSC0003DMT400060046 locus=PGSC0003DMG400023361 ID=PGSC0003DMT400060046.v4.03 annot-version=v4.03
Sequence

MKVIEKIQESVKDDRVVFSFEFFPPKTEDGVDNLFERMERMVSHNPSFCDITWGAGGSTA
DLTLEISNRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDK
FVQVEGGFACALDLVKHMRAKYGDYFGITVAGYPEAHPDVIPATGLATLETYENELAYLK
QKVDAGADLIVTQLFYDTDNFLKFVSDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTR
IPAEITAALEPIKDNEEAVKAYGIHLGTEMCKKIMASGIKTLHLYTLNMEKSALAILMNL
GLIEESKISRPLPWRRPTNVFRIKEDVRPIFWANRPKSYISRTIGWDEFPHGRWGNAKNP
SYGALSDYQFMRARSRDKKLQEEWAIALNSVEDIYERFMNYCLGKLRSCPWSELDGLQAE
TKIIDDHLGNINSKGFLTINSQPSVNGAKSDAPLVGWGGPGGFVYQKAYLEFFCSREKLN
AVIEKCMAFPFLTYMAVNKKGNWMSNVNQVDVNAVTWGVFPAKEIVQPTVVDPASFMVWK
DEAFEIWSRGWAQLYPENDPSRTLLEQVQNSYFLVSLVDNDYINGDLFAIFKDMIWN*

Transcript Sequence

Transcript ID

PGSC0003DMT400060046
Transcript Infomation

pacid=37445400 locus=PGSC0003DMG400023361 ID=PGSC0003DMT400060046.v4.03 annot-version=v4.03
Sequence

ATGAAGGTTATTGAGAAAATTCAAGAATCTGTGAAAGATGACAGAGTAGTTTTCTCTTTT
GAGTTTTTTCCACCAAAAACTGAAGATGGGGTTGATAATTTGTTTGAAAGAATGGAAAGA
ATGGTGTCACATAACCCATCTTTTTGTGATATTACATGGGGTGCTGGTGGTTCAACAGCA
GATCTGACTCTTGAAATTTCAAATAGGATGCAGAATATGGTGTGTGTTGAGACAATGATG
CATTTGACTTGTACAAATATGCCTGTTGAGAAAATTGATCATGCTCTTGAAACTATTAAG
TCTAATGGGATTCAAAATGTTCTCGCTCTTCGTGGAGATCCTCCTCATGGACAAGATAAG
TTTGTTCAAGTTGAAGGTGGTTTTGCTTGTGCTTTAGATCTGGTAAAGCACATGCGGGCC
AAGTATGGGGATTACTTTGGGATCACTGTTGCGGGTTACCCTGAGGCGCATCCTGATGTT
ATACCTGCAACTGGACTAGCTACACTTGAGACATACGAAAACGAACTTGCCTATCTCAAA
CAAAAGGTTGATGCTGGAGCTGATCTCATTGTAACTCAACTCTTCTATGATACTGATAAT
TTCCTCAAGTTTGTCAGTGATTGTCGTCAAATTGGGATAACTTGTCCCATTGTTCCAGGA
ATCATGCCCATCAACAATTATAAGGGCTTCTTGCGCATGACTGGATTTTGCAAAACTAGG
ATCCCGGCAGAGATTACAGCTGCCTTGGAACCTATTAAGGATAACGAAGAGGCTGTCAAA
GCATATGGAATTCACCTTGGAACTGAAATGTGCAAGAAAATTATGGCCAGTGGCATTAAG
ACATTGCATCTTTATACATTAAACATGGAGAAATCAGCATTGGCCATTTTGATGAATCTT
GGATTGATTGAAGAGTCCAAAATTTCAAGGCCATTACCTTGGAGACGTCCTACAAATGTT
TTCCGTATCAAAGAAGATGTCCGTCCTATATTCTGGGCCAACCGTCCGAAGAGCTACATC
TCAAGAACCATTGGTTGGGATGAGTTTCCACATGGCCGATGGGGCAATGCTAAAAATCCG
TCATATGGAGCACTTAGTGATTATCAGTTCATGCGGGCACGCTCACGTGATAAGAAACTT
CAAGAGGAATGGGCTATTGCTCTCAATAGTGTGGAAGACATCTATGAGAGATTTATGAAC
TACTGTCTCGGGAAGCTGAGAAGTTGTCCTTGGTCTGAGTTAGATGGGCTTCAGGCAGAG
ACAAAGATCATCGATGATCACTTGGGTAATATAAACTCGAAAGGTTTCCTGACTATTAAC
AGCCAACCATCAGTTAATGGTGCAAAGTCCGACGCTCCTTTAGTTGGATGGGGTGGTCCT
GGTGGATTTGTTTATCAAAAGGCATACTTAGAGTTCTTTTGCTCGCGTGAGAAGTTAAAT
GCTGTTATCGAAAAATGCATGGCTTTCCCCTTCCTTACCTACATGGCTGTGAACAAGAAA
GGAAACTGGATGTCCAACGTCAACCAAGTCGACGTCAATGCAGTGACATGGGGCGTCTTC
CCAGCTAAGGAGATTGTACAACCAACCGTCGTTGATCCTGCCAGCTTCATGGTATGGAAA
GACGAGGCATTTGAAATCTGGTCACGAGGTTGGGCTCAATTATACCCCGAGAATGATCCA
TCTAGAACATTACTCGAACAGGTTCAAAACAGTTACTTCTTGGTCAGCCTTGTCGATAAC
GATTACATCAATGGAGATTTGTTTGCCATCTTCAAGGATATGATCTGGAATTAG