Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060020
CDS Infomation

pacid=37443701 polypeptide=PGSC0003DMP400040378 locus=PGSC0003DMG400023355 ID=PGSC0003DMT400060020.v4.03 annot-version=v4.03
Sequence

ATGAGTTGCCTCCCCTGCTTCAAGAAAAAAGCCGAATCACCGGAGGACGAGGTGCCGGTC
GCTCAATCTAAAGGAATCTCAACCACCCCACCAAATCCTGCTGAACCATTTCACAAAGGC
GACAACGTAAACAGCAATGCTAAGACTTACACATTCCGCGAGCTCGCGAGTGCAACAAAA
AATTTCAAGCAAGAATGCCTGATAGGTGAAGGTGGATTTGGAAGAGTGTTCAAGGGAACA
CTTCAAGGTGGAGAGATTGTGGCAGTGAAGCAACTAGACAGAAGTGGAACACAAGGAAAC
CAAGAGTTCCTTGTTGAGGTCTCAAAGTTGACTCTCCTTAAGCACCAAAATTTGGTCAAT
CTCATTGGATATTGTGCTGATGGTGATCAGAGGATTTTGGTCTATGAATATATGCCAATG
GGTTGCCTAAACGATCATCTTCTTGATCTCAAAGAGGATAAAAAGCCACTAGGTTGGCTA
TCCAGAATGAAGATAGCTTTAGGTGCTGCTAATGGACTCGAGTATCTACACAAAACAGCC
AACCCACCAATAATTTATCGCGATTTGAAAGGCACAAACATTCTATTGGATAAAGATTTT
AATCCTAGACTTTCAGATTATGGTCTTGCTAAGCTTGCAGGTGGAGGGAGTAAGACAAAC
ATGTCACCGATGATGATGGGAACTGGTTATTGTGCTCCGGAGTTTGAAAAAAATGGTGAA
CACACTTTGAAGTCAGATGTATATTGTTTTGGAATTGTTTTGCTTGAACTTATAACAGGG
CGTCGAGCAGTGGATACTACAAGGCCAGCAAATGAGCAAAACTTAGTTGCTTGGGCACAA
CCCTATTTCAAGGATCCAAAGAAGTTCCCTGAATTGGCAGATCCGTGCCTCGGGAAGAGT
TTCCCTGTCAAAGGTTTAAATCAAGCAGTTGGGGTTACAGCAATGTGTCTTCAAGACGAA
CCAATGGTTCGTCCTTTTATTGGTGATGTTGTGGCTGCTCTTACTTTTCTTACAATGCCC
CAGCCAGATGACCCTATTCCCAGTTCACCTCCCGCTCCAACCCCAACGTCAAATATTGAA
AAGTCAAGTCCAAATAATGAAGATCAAGAGAGTTCCGAAAACGAGGACCAAGGTTTTTCA
GATGATGAGGATCAAGATTATTCTGATGATGAGTATGAAGATAGTGAGAGTGACCAACAA
AATGATGAAAAAGTCCATGACAAACAACGCTCTCAAAAAGTTAGTGACAAACGGAAGTCT
CAAAAAGTTCGTGACAGTCAAGAGGATGAGAAAGCAAGTTCAGAATATGGATATGGAAGT
GCATCGGGATCTTCAGAATATGAGGACAGTGGAGATGATGAACGACAAAATGTAACAGCA
AAATCTGCAAAATACTCTTCGCCTTCAAGACATAAAAGCAAGGTGAAATCTCGTGCTAAA
AGTATCAACTCAGGTTCAAGTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040378
PEP Infomation

pacid=37443701 transcript=PGSC0003DMT400060020 locus=PGSC0003DMG400023355 ID=PGSC0003DMT400060020.v4.03 annot-version=v4.03
Sequence

MSCLPCFKKKAESPEDEVPVAQSKGISTTPPNPAEPFHKGDNVNSNAKTYTFRELASATK
NFKQECLIGEGGFGRVFKGTLQGGEIVAVKQLDRSGTQGNQEFLVEVSKLTLLKHQNLVN
LIGYCADGDQRILVYEYMPMGCLNDHLLDLKEDKKPLGWLSRMKIALGAANGLEYLHKTA
NPPIIYRDLKGTNILLDKDFNPRLSDYGLAKLAGGGSKTNMSPMMMGTGYCAPEFEKNGE
HTLKSDVYCFGIVLLELITGRRAVDTTRPANEQNLVAWAQPYFKDPKKFPELADPCLGKS
FPVKGLNQAVGVTAMCLQDEPMVRPFIGDVVAALTFLTMPQPDDPIPSSPPAPTPTSNIE
KSSPNNEDQESSENEDQGFSDDEDQDYSDDEYEDSESDQQNDEKVHDKQRSQKVSDKRKS
QKVRDSQEDEKASSEYGYGSASGSSEYEDSGDDERQNVTAKSAKYSSPSRHKSKVKSRAK
SINSGSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400060020
Transcript Infomation

pacid=37443701 locus=PGSC0003DMG400023355 ID=PGSC0003DMT400060020.v4.03 annot-version=v4.03
Sequence

ATGAGTTGCCTCCCCTGCTTCAAGAAAAAAGCCGAATCACCGGAGGACGAGGTGCCGGTC
GCTCAATCTAAAGGAATCTCAACCACCCCACCAAATCCTGCTGAACCATTTCACAAAGGC
GACAACGTAAACAGCAATGCTAAGACTTACACATTCCGCGAGCTCGCGAGTGCAACAAAA
AATTTCAAGCAAGAATGCCTGATAGGTGAAGGTGGATTTGGAAGAGTGTTCAAGGGAACA
CTTCAAGGTGGAGAGATTGTGGCAGTGAAGCAACTAGACAGAAGTGGAACACAAGGAAAC
CAAGAGTTCCTTGTTGAGGTCTCAAAGTTGACTCTCCTTAAGCACCAAAATTTGGTCAAT
CTCATTGGATATTGTGCTGATGGTGATCAGAGGATTTTGGTCTATGAATATATGCCAATG
GGTTGCCTAAACGATCATCTTCTTGATCTCAAAGAGGATAAAAAGCCACTAGGTTGGCTA
TCCAGAATGAAGATAGCTTTAGGTGCTGCTAATGGACTCGAGTATCTACACAAAACAGCC
AACCCACCAATAATTTATCGCGATTTGAAAGGCACAAACATTCTATTGGATAAAGATTTT
AATCCTAGACTTTCAGATTATGGTCTTGCTAAGCTTGCAGGTGGAGGGAGTAAGACAAAC
ATGTCACCGATGATGATGGGAACTGGTTATTGTGCTCCGGAGTTTGAAAAAAATGGTGAA
CACACTTTGAAGTCAGATGTATATTGTTTTGGAATTGTTTTGCTTGAACTTATAACAGGG
CGTCGAGCAGTGGATACTACAAGGCCAGCAAATGAGCAAAACTTAGTTGCTTGGGCACAA
CCCTATTTCAAGGATCCAAAGAAGTTCCCTGAATTGGCAGATCCGTGCCTCGGGAAGAGT
TTCCCTGTCAAAGGTTTAAATCAAGCAGTTGGGGTTACAGCAATGTGTCTTCAAGACGAA
CCAATGGTTCGTCCTTTTATTGGTGATGTTGTGGCTGCTCTTACTTTTCTTACAATGCCC
CAGCCAGATGACCCTATTCCCAGTTCACCTCCCGCTCCAACCCCAACGTCAAATATTGAA
AAGTCAAGTCCAAATAATGAAGATCAAGAGAGTTCCGAAAACGAGGACCAAGGTTTTTCA
GATGATGAGGATCAAGATTATTCTGATGATGAGTATGAAGATAGTGAGAGTGACCAACAA
AATGATGAAAAAGTCCATGACAAACAACGCTCTCAAAAAGTTAGTGACAAACGGAAGTCT
CAAAAAGTTCGTGACAGTCAAGAGGATGAGAAAGCAAGTTCAGAATATGGATATGGAAGT
GCATCGGGATCTTCAGAATATGAGGACAGTGGAGATGATGAACGACAAAATGTAACAGCA
AAATCTGCAAAATACTCTTCGCCTTCAAGACATAAAAGCAAGGTGAAATCTCGTGCTAAA
AGTATCAACTCAGGTTCAAGTAGCTGA