Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060003
CDS Infomation

pacid=37443811 polypeptide=PGSC0003DMP400040363 locus=PGSC0003DMG400023346 ID=PGSC0003DMT400060003.v4.03 annot-version=v4.03
Sequence

ATGGTGGACTACTATGCAACTAATCCTGGACCAATTGAGGATATTGTGTTGTACGATCAA
GATAAACATGTATCATCTGCTGTTTGGGAGGGGCAGGAGCGTGGTGCTCTTAGGTGCCAT
GAGCACACATCAAAGCTCGATCAGTGGATGCTCACAGAGAAACAGGTTGAGTTGGTTAAA
ATGGCTGGATTTGGCTATTTGAGAATGATACCGGCAATCAGTTTGGATAACCCACTCATA
TCTGCCCTAGTTGAGAGATGGAGGAGAGAAACAAACACATTCCATTTCATTGTTGGGGAA
ATGACTGTTACCCTTGAGGATGTCGCGTACTTGCTTGGGCTACCAGTTGATGGTGAGGCT
GTTATAGGTGTGACATACACTTCATGTGAAGCAGTCTGTATCAAATTGTTGGGAAAAGCA
CCTGACTCTGGATATACCAGTGGTGGGATGGTGAAGCTTAGTTGGTTGAAAGAGACCTTC
TCCCAGTGTCCGGAGGATGCTTCCATGGAGGATATTGCGCGTTGTACACGTGCTTATCTT
CTTTACCTGGTCGGTAGCACCATCTTTTCAACTACAACTGGCAATAAAGTACCTGTCATG
TACCTTCCTCTGTTTGAAAATTTTGATGAAGCTGGCAAGTATGCTTGGGGTGCTGCAGCA
TTATCCTTCTTGTACAGAGCACTCGGCAATGCTTCCCTAAGGTCCCAAAGCACAATTAGT
GGCTGTTTGACATTATTACAGTGCTGGAGTTACTACCACCTCAATGTTGGTCGGCCAAAG
CTTAATCATGATCCAATCCATGAGTGTTTCCCATTTGTGCTTAGGTGGAAAGGTAAACAA
AGCAGTCCAACGTCAAACCGTGATGTGGCATTCTACCGAAAATCATTGGACTCTATGAAG
CCATCTGATGTTGACTGGTGTCCTTACTCAAACATTAGCCATACCGTCATACCAGAACAT
ATATTGCGCAGCCTCATTCTGGGGAGATCAAAGACCATGTTGATATGTTATGACAAGGCA
GAAAGACACCTTCCAGATCGTTGCCTACGGCAATTTGGCATGCATCAGACTGTCCCCGAA
GAGGTACAGAAGTGGGAGAGGAAGAGTCGAGGAGTAGATGGTGGTGTAGATCTCTCAACA
AAAATGGAATCAGAGCTTAATGAATGGTCAAATCGGCATCTCTATATTGTGGAGGCAGAG
GAAGATGTTGAGGAAAGTGAATACATGCAGTGGTATATGAGAATTACAAGGAAGTTGGTT
GGGAGGCCTGTACCTATCTCATCTGAGTTTCAAAGAATGAATGCTGCACTGAGAGAGATT
GCCCATATAGCGGACACCATTTCAACTCATGGGTTGGATGATCAACAGTTACAATCTGTC
ACAAGAATCCGATATATTACTTATGAATGCCTGAGGGATCAGATTGCAAGTACGGTAGTT
GTTGCATCGAACTCACAAAGTGAAGTCGGAAAGAAAGTACGTGGAAAGGAGAGAGTAAGA
AGGAAGGGGATGGGCAAACGTAAGCGTAAAGAAGAGGTAGAGCAATATTATGCCGCAGGG
ATACCCATGCAACATCGGATACCTGCTACAACTTTTGATGTTGATCCTTCTCACCTATAT
CACATCGGCAATGAGATGGATAATCCTCATTTGTGCATTACAGTAAGTGAAGATGATCAT
GGTCGGATATCTCATGTGGCTCATAGTGTCGATGATATTGATTTCTGTGAAGATGCTAAG
GAAGTTGATGAATCACACTTCCATCATTTAGTTGGAGAACAAGATGGCCATCTCTCCAGT
GAAGTAGCAGAAGATAAACCTCATGCTTCAATGGATATCGTGGTTCCTCAGGTCTCCCAT
GAAACTAGAGAGGATGTTGCACAGCAGAACGATTACGGGGTTCTTGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040363
PEP Infomation

pacid=37443811 transcript=PGSC0003DMT400060003 locus=PGSC0003DMG400023346 ID=PGSC0003DMT400060003.v4.03 annot-version=v4.03
Sequence

MVDYYATNPGPIEDIVLYDQDKHVSSAVWEGQERGALRCHEHTSKLDQWMLTEKQVELVK
MAGFGYLRMIPAISLDNPLISALVERWRRETNTFHFIVGEMTVTLEDVAYLLGLPVDGEA
VIGVTYTSCEAVCIKLLGKAPDSGYTSGGMVKLSWLKETFSQCPEDASMEDIARCTRAYL
LYLVGSTIFSTTTGNKVPVMYLPLFENFDEAGKYAWGAAALSFLYRALGNASLRSQSTIS
GCLTLLQCWSYYHLNVGRPKLNHDPIHECFPFVLRWKGKQSSPTSNRDVAFYRKSLDSMK
PSDVDWCPYSNISHTVIPEHILRSLILGRSKTMLICYDKAERHLPDRCLRQFGMHQTVPE
EVQKWERKSRGVDGGVDLSTKMESELNEWSNRHLYIVEAEEDVEESEYMQWYMRITRKLV
GRPVPISSEFQRMNAALREIAHIADTISTHGLDDQQLQSVTRIRYITYECLRDQIASTVV
VASNSQSEVGKKVRGKERVRRKGMGKRKRKEEVEQYYAAGIPMQHRIPATTFDVDPSHLY
HIGNEMDNPHLCITVSEDDHGRISHVAHSVDDIDFCEDAKEVDESHFHHLVGEQDGHLSS
EVAEDKPHASMDIVVPQVSHETREDVAQQNDYGVLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400060003
Transcript Infomation

pacid=37443811 locus=PGSC0003DMG400023346 ID=PGSC0003DMT400060003.v4.03 annot-version=v4.03
Sequence

ATGGTGGACTACTATGCAACTAATCCTGGACCAATTGAGGATATTGTGTTGTACGATCAA
GATAAACATGTATCATCTGCTGTTTGGGAGGGGCAGGAGCGTGGTGCTCTTAGGTGCCAT
GAGCACACATCAAAGCTCGATCAGTGGATGCTCACAGAGAAACAGGTTGAGTTGGTTAAA
ATGGCTGGATTTGGCTATTTGAGAATGATACCGGCAATCAGTTTGGATAACCCACTCATA
TCTGCCCTAGTTGAGAGATGGAGGAGAGAAACAAACACATTCCATTTCATTGTTGGGGAA
ATGACTGTTACCCTTGAGGATGTCGCGTACTTGCTTGGGCTACCAGTTGATGGTGAGGCT
GTTATAGGTGTGACATACACTTCATGTGAAGCAGTCTGTATCAAATTGTTGGGAAAAGCA
CCTGACTCTGGATATACCAGTGGTGGGATGGTGAAGCTTAGTTGGTTGAAAGAGACCTTC
TCCCAGTGTCCGGAGGATGCTTCCATGGAGGATATTGCGCGTTGTACACGTGCTTATCTT
CTTTACCTGGTCGGTAGCACCATCTTTTCAACTACAACTGGCAATAAAGTACCTGTCATG
TACCTTCCTCTGTTTGAAAATTTTGATGAAGCTGGCAAGTATGCTTGGGGTGCTGCAGCA
TTATCCTTCTTGTACAGAGCACTCGGCAATGCTTCCCTAAGGTCCCAAAGCACAATTAGT
GGCTGTTTGACATTATTACAGTGCTGGAGTTACTACCACCTCAATGTTGGTCGGCCAAAG
CTTAATCATGATCCAATCCATGAGTGTTTCCCATTTGTGCTTAGGTGGAAAGGTAAACAA
AGCAGTCCAACGTCAAACCGTGATGTGGCATTCTACCGAAAATCATTGGACTCTATGAAG
CCATCTGATGTTGACTGGTGTCCTTACTCAAACATTAGCCATACCGTCATACCAGAACAT
ATATTGCGCAGCCTCATTCTGGGGAGATCAAAGACCATGTTGATATGTTATGACAAGGCA
GAAAGACACCTTCCAGATCGTTGCCTACGGCAATTTGGCATGCATCAGACTGTCCCCGAA
GAGGTACAGAAGTGGGAGAGGAAGAGTCGAGGAGTAGATGGTGGTGTAGATCTCTCAACA
AAAATGGAATCAGAGCTTAATGAATGGTCAAATCGGCATCTCTATATTGTGGAGGCAGAG
GAAGATGTTGAGGAAAGTGAATACATGCAGTGGTATATGAGAATTACAAGGAAGTTGGTT
GGGAGGCCTGTACCTATCTCATCTGAGTTTCAAAGAATGAATGCTGCACTGAGAGAGATT
GCCCATATAGCGGACACCATTTCAACTCATGGGTTGGATGATCAACAGTTACAATCTGTC
ACAAGAATCCGATATATTACTTATGAATGCCTGAGGGATCAGATTGCAAGTACGGTAGTT
GTTGCATCGAACTCACAAAGTGAAGTCGGAAAGAAAGTACGTGGAAAGGAGAGAGTAAGA
AGGAAGGGGATGGGCAAACGTAAGCGTAAAGAAGAGGTAGAGCAATATTATGCCGCAGGG
ATACCCATGCAACATCGGATACCTGCTACAACTTTTGATGTTGATCCTTCTCACCTATAT
CACATCGGCAATGAGATGGATAATCCTCATTTGTGCATTACAGTAAGTGAAGATGATCAT
GGTCGGATATCTCATGTGGCTCATAGTGTCGATGATATTGATTTCTGTGAAGATGCTAAG
GAAGTTGATGAATCACACTTCCATCATTTAGTTGGAGAACAAGATGGCCATCTCTCCAGT
GAAGTAGCAGAAGATAAACCTCATGCTTCAATGGATATCGTGGTTCCTCAGGTCTCCCAT
GAAACTAGAGAGGATGTTGCACAGCAGAACGATTACGGGGTTCTTGTTTAG