Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059999
CDS Infomation

pacid=37443675 polypeptide=PGSC0003DMP400040360 locus=PGSC0003DMG400023345 ID=PGSC0003DMT400059999.v4.03 annot-version=v4.03
Sequence

ATGGTTGATCAACCGTGGTTTTCACAGCAGAAATACCCAAATCATATGTCATTTGAAGGT
GATGATGGTCTGCGTAGGGAAATATGGAAGGTCTGTTCTGGTTCATCGTTGGATGTTCCA
AAGGCTGGGGAGAGAGTATACTACTTTCCAAGACTTCATGTGGAGCAGCTGGAGCAATCA
TCCAACCAGGAACTGATTGAAAGACTACAATTGTCCAACTTACCCCCAAAGATGCTTTGT
CGTGTTCTACATATTCGCCTTCTGGTTGAACATGAGACGGAAGAGGTTTATGCGGAGATC
AGATTATTGCCAAATCAAGATCAAAATGAGCCAACAGCTCCGGATTTTAGTCCTCTAGAC
ACTCCAAGGCCCCAGTTTCAGTCGTTTTGCAAGTGTTTAACTCAATCTGATATAAAAAGC
AATTGGGGACTGTTTGTTCCCCTGAAAGATGCTGTCAAATGCTTTCCTCCCTTGGACATG
CGACAAGAAAAACCAAGCCAAGAACTGATAGCAACGGATCTTCAAGGAAATGAATGGCGC
TTTAAACATGCATACCAAGGCCAACCACGGAGGCATTCGCTCACAAATGGCTGGAGTACA
TTCGTTACTAGTAAGAAATTGCTTGCCGGGGATTTAGTTGTGTTCTTAAGGGATGAAACT
GGCAAACTACATGTTGGGATTAGACGTTTATCTTATCAACGTTGTTCTATTGGAGCATCA
ACATTTTCAAGACAAAGCGTGGAAGGTGCTCTTGCCGTTGCTTCTCATGCCTTTGCCACC
CGAAGTCTCTTTTCTGTTTACCACAAGCCATGTTATAATAAATCAAGTCAATTTATTATG
AGCTTGAGCAAGTATTTTGAAGGTGGAAACCATGGCCGTGGAGTTGGCATGATATCTCGA
ATGCAACATGAGGGTGAGGACTCCTCTCATGTGAGAAGAACAAATGATCTGGACCAGATA
TCTTTATCTCAGGGTCAACAGACAACAAATCTTATGCTCGAGGAGGATCAGTACATGCAA
GACTCGGAAGCAGTACTCGATTGTGCTCAATCTACTATGACAGATTTGGAGATCAGGCAG
CAGACAACTGGATCGCATAATAATGTCCATTGTTTTTCCCCTGTAGAGGACAATGGACTG
CAATTGCATACAGCAGTTGCGAGGGAGAATAATGAGGGATCTATTCCAAATGACACTGTA
AGCATCCAAACTAGAGATGAGGACTTGTATGAGCTATTCGAGGATTTTGACTTTCCAGAC
TCTATAAACACTAGTCTCGATACTATAGCTTTGGATTTGGGCAGTGATTGGTTCAGATCG
ACGCTACAAGAGCAAGAAGAGACTATTACTCCCAGTCACCCAAATGCCTCAGAAGATCAC
TCTAGACGGACTTCTTCTGTATTGGAGCATCCAACTTCCTTCCAAGTGATGTCTATCTCT
ACAAACCCGAGTCAGATTCCCTACGAAGGACCTGGTCGTGGTGACGAGCAAGTTCCTTGG
GGAGGCTATCAAGTAGCACGACGAACTTTACCAATACTCAGTAGGGTTGTCTCGCGGTAC
CCTGATTCACTCGTGAACTTCAGGGTTGCAAGTAGCATACTTCAGTCGGTGTATTTGGAA
ATATTGGCAGAGTTAGTCTACTTTCTCAATAATCTTACGATAGTGAACTTGTCAAAGGAT
CAGTTCAATGTTGCTAGGCAACATATCTGGGACCTAAAGTTAAGTGGCATTGAAATAGGC
TGGCTTGAAAATCGTTTACTGCATATAGATGAAGTATTTATCATGGAAAGTTTACGGCAA
AGGCGACAAGCACTCACACGTAGAATGGAGGAGACATTTAAGCAGCTGGATGGGGAACTT
GGATGTATAGACAAGGAGCTTCATGAACTATCTCTAAAGGTTGGCCCTAATCCCCCTATG
AGATTGCACTCTGTCTTGGAGGGTTTGTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040360
PEP Infomation

pacid=37443675 transcript=PGSC0003DMT400059999 locus=PGSC0003DMG400023345 ID=PGSC0003DMT400059999.v4.03 annot-version=v4.03
Sequence

MVDQPWFSQQKYPNHMSFEGDDGLRREIWKVCSGSSLDVPKAGERVYYFPRLHVEQLEQS
SNQELIERLQLSNLPPKMLCRVLHIRLLVEHETEEVYAEIRLLPNQDQNEPTAPDFSPLD
TPRPQFQSFCKCLTQSDIKSNWGLFVPLKDAVKCFPPLDMRQEKPSQELIATDLQGNEWR
FKHAYQGQPRRHSLTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQRCSIGAS
TFSRQSVEGALAVASHAFATRSLFSVYHKPCYNKSSQFIMSLSKYFEGGNHGRGVGMISR
MQHEGEDSSHVRRTNDLDQISLSQGQQTTNLMLEEDQYMQDSEAVLDCAQSTMTDLEIRQ
QTTGSHNNVHCFSPVEDNGLQLHTAVARENNEGSIPNDTVSIQTRDEDLYELFEDFDFPD
SINTSLDTIALDLGSDWFRSTLQEQEETITPSHPNASEDHSRRTSSVLEHPTSFQVMSIS
TNPSQIPYEGPGRGDEQVPWGGYQVARRTLPILSRVVSRYPDSLVNFRVASSILQSVYLE
ILAELVYFLNNLTIVNLSKDQFNVARQHIWDLKLSGIEIGWLENRLLHIDEVFIMESLRQ
RRQALTRRMEETFKQLDGELGCIDKELHELSLKVGPNPPMRLHSVLEGLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400059999
Transcript Infomation

pacid=37443675 locus=PGSC0003DMG400023345 ID=PGSC0003DMT400059999.v4.03 annot-version=v4.03
Sequence

ATGGTTGATCAACCGTGGTTTTCACAGCAGAAATACCCAAATCATATGTCATTTGAAGGT
GATGATGGTCTGCGTAGGGAAATATGGAAGGTCTGTTCTGGTTCATCGTTGGATGTTCCA
AAGGCTGGGGAGAGAGTATACTACTTTCCAAGACTTCATGTGGAGCAGCTGGAGCAATCA
TCCAACCAGGAACTGATTGAAAGACTACAATTGTCCAACTTACCCCCAAAGATGCTTTGT
CGTGTTCTACATATTCGCCTTCTGGTTGAACATGAGACGGAAGAGGTTTATGCGGAGATC
AGATTATTGCCAAATCAAGATCAAAATGAGCCAACAGCTCCGGATTTTAGTCCTCTAGAC
ACTCCAAGGCCCCAGTTTCAGTCGTTTTGCAAGTGTTTAACTCAATCTGATATAAAAAGC
AATTGGGGACTGTTTGTTCCCCTGAAAGATGCTGTCAAATGCTTTCCTCCCTTGGACATG
CGACAAGAAAAACCAAGCCAAGAACTGATAGCAACGGATCTTCAAGGAAATGAATGGCGC
TTTAAACATGCATACCAAGGCCAACCACGGAGGCATTCGCTCACAAATGGCTGGAGTACA
TTCGTTACTAGTAAGAAATTGCTTGCCGGGGATTTAGTTGTGTTCTTAAGGGATGAAACT
GGCAAACTACATGTTGGGATTAGACGTTTATCTTATCAACGTTGTTCTATTGGAGCATCA
ACATTTTCAAGACAAAGCGTGGAAGGTGCTCTTGCCGTTGCTTCTCATGCCTTTGCCACC
CGAAGTCTCTTTTCTGTTTACCACAAGCCATGTTATAATAAATCAAGTCAATTTATTATG
AGCTTGAGCAAGTATTTTGAAGGTGGAAACCATGGCCGTGGAGTTGGCATGATATCTCGA
ATGCAACATGAGGGTGAGGACTCCTCTCATGTGAGAAGAACAAATGATCTGGACCAGATA
TCTTTATCTCAGGGTCAACAGACAACAAATCTTATGCTCGAGGAGGATCAGTACATGCAA
GACTCGGAAGCAGTACTCGATTGTGCTCAATCTACTATGACAGATTTGGAGATCAGGCAG
CAGACAACTGGATCGCATAATAATGTCCATTGTTTTTCCCCTGTAGAGGACAATGGACTG
CAATTGCATACAGCAGTTGCGAGGGAGAATAATGAGGGATCTATTCCAAATGACACTGTA
AGCATCCAAACTAGAGATGAGGACTTGTATGAGCTATTCGAGGATTTTGACTTTCCAGAC
TCTATAAACACTAGTCTCGATACTATAGCTTTGGATTTGGGCAGTGATTGGTTCAGATCG
ACGCTACAAGAGCAAGAAGAGACTATTACTCCCAGTCACCCAAATGCCTCAGAAGATCAC
TCTAGACGGACTTCTTCTGTATTGGAGCATCCAACTTCCTTCCAAGTGATGTCTATCTCT
ACAAACCCGAGTCAGATTCCCTACGAAGGACCTGGTCGTGGTGACGAGCAAGTTCCTTGG
GGAGGCTATCAAGTAGCACGACGAACTTTACCAATACTCAGTAGGGTTGTCTCGCGGTAC
CCTGATTCACTCGTGAACTTCAGGGTTGCAAGTAGCATACTTCAGTCGGTGTATTTGGAA
ATATTGGCAGAGTTAGTCTACTTTCTCAATAATCTTACGATAGTGAACTTGTCAAAGGAT
CAGTTCAATGTTGCTAGGCAACATATCTGGGACCTAAAGTTAAGTGGCATTGAAATAGGC
TGGCTTGAAAATCGTTTACTGCATATAGATGAAGTATTTATCATGGAAAGTTTACGGCAA
AGGCGACAAGCACTCACACGTAGAATGGAGGAGACATTTAAGCAGCTGGATGGGGAACTT
GGATGTATAGACAAGGAGCTTCATGAACTATCTCTAAAGGTTGGCCCTAATCCCCCTATG
AGATTGCACTCTGTCTTGGAGGGTTTGTTGTAG