Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059986
CDS Infomation

pacid=37442988 polypeptide=PGSC0003DMP400040348 locus=PGSC0003DMG400023339 ID=PGSC0003DMT400059986.v4.03 annot-version=v4.03
Sequence

ATGGTAAGCAAATGGGGAAAAGTGAAATTGGCTCTTGGTTTGAATCTTTGTACTTATGTT
CCTAAAAAAACACTGGATGAAAATGATGATAGTGGTAGTTCAACAGTTTCTGAATCAGAG
AGGCATTCCGGCGCCGCCCTTATATCTCCGGCGACGGCTGACTGGGATGTTGCTCCGGCG
ACCCCAAGGTCACAAGTGTTGAAGCTCTCCAAGAGCTTAAGTAGATCTTCTAAGAAAACA
TGCTCAATATGTTTGGCTTCAATGAAGAGAGGGGATGGCCATGCTATATTCACCGCTGAA
TGTTCACATTCGTTTCACTTCCAGTGTATTGCTTCAAACGTGAAACATGGAAATCAAGTT
TGCCCAGTTTGCAGGGCAGAATGGAAAGAAATTCCTCTGCAGTTTCCCAGCCTAGATCCT
CCTATTGGGAGGGCTAGAGTCAATCCTGTGGACTGGCCCCAAAATAATGCACTAATGACT
GTAATACGTCGTTTACCAACAACCCGCCCAACACCAAATCGGCATATTTCCCCTCTATTT
CAGGCTCCTGAGCCAGCCATCTTTGATGATGATGAATCTTTGGGTCATCAACTCAATTCT
ACTGAGAAAAGTGCTTCTGATAAGAGTTCAATAGATAGTTGTGAGTCTTGTGACAACAGA
AAAGTAAAGATTGAAACTTACCCTGAGGTTCCGGCAGTCTCAAGGTCCAGTGCTTCAGAT
AACTTTACTGTGTTAGTCCAGCTAAAGGCTCCTGGTTCAGTCTCAGTACAAGAACCAGGC
AAAAACCAGGTAAATTTGTCTCAGGTTTCCCAAACGCCTCGTGCTCCTGTTGACCTTGTC
ACAGTTCTTGACATCAGTGGAAGTATGGCTGGCACCAAACTAGCATTACTAAAACGAGCT
ATGGGTTTTGTGATACAGAATCTCGGTCCCAATGATAGGCTGGCAGTAATTGCCTTCTCT
TCGACTGCTCGCCGCCTCTTCCCTCTTCGTAGGATGTCTGAGACAGGACGGCAGCAAGCA
CTCCAAGCTGTAAACTCCCTGGTTGCAAATGGAGGGACAAATATTGCTGAAGGCTTGAGA
AAGGGTGCCAAGATAATGGAAGACCGTAAGGAAAAGAACTCTGTTACTAGTATAATACTG
TTGTCTGATGGTCAAGACACATACACAGTCAGCAATAATTCTGGTAGTAGACAGCAGCAA
CCTAACTACAAGCTGCTTCTACCCTTGTCCATTCATGGTGGAAACAGTTCAGGGTTTAAA
ATACCAGTACATGCTTTCGGGTTTGGTGCTGATCACGATGCTTCATCAATGCATTCGATA
TCAGAGATTTCAGGAGGAACGTTTTCATTTATTGAGACAGAAGGTGTCATACAGGATGCT
TTTGCTCAATGCATTGGAGGCCTTCTCAGTGTTGTAGTCAAGGAGCTTCAGGTAAGCATC
GAGTGTCTTCACCCAGGTGTCCGTCTTAGCTCTTTAAAAGCAGGAAGCTATCCAAACTGC
TTAATGTCTGATGGACACATGGGAACAATTGATGTTGGAGATTTATATGCTGATGAAGAG
AGGGATTTTCTGGTTTCAATCAATATCCCTACTGAATCTTCATGTGCAGAAACATCATTG
TTAAAGGTTAAGTGTGTATACGTGGATCCTTTCACGAAAGAGAAGGTTTCCATCAGAAGC
GAAGATCTTAGGATCAAGAGACCTGAAAAGGCTGGACAAGAGAGTGTTTTAATTGAAGTA
GACAGGCAGCAGAACAGGGTCCGAGTTGCCGAGGCAATGGCACAGGCACGAGCTGCTGCT
GAGAAAGGAGACCTAGTTGGTGCGACTTCCATCCTAGAGAACTCCAGAAAGTTGTTGTCA
GAGTCACAGTCTGCTAAATCTCATGATCGGCTTTGTGTTGCACTTGATGCTGAGCTCAAG
GAGATGCAGGAGAGGATGGCAAGCAGAAATGTATACGAAGCATCAGGAAGGGCATATATC
TTGTCAGGGCTGAGCTCACACTCGTGGCAAAGAGCAACAGCACGAGGTGACTCCACAGGT
GGATCAAGTCTTGTCCAAGCCTATCAAACCCCTTCCATGGCTGAGATGGTAACTCGATCT
CAGGCTACATTACTGGCTAGCCCTTCAGCTCAAAGAAATGTTCAACCAGTGTGGTCATTT
GCATCACAACCAAAGCCTAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040348
PEP Infomation

pacid=37442988 transcript=PGSC0003DMT400059986 locus=PGSC0003DMG400023339 ID=PGSC0003DMT400059986.v4.03 annot-version=v4.03
Sequence

MVSKWGKVKLALGLNLCTYVPKKTLDENDDSGSSTVSESERHSGAALISPATADWDVAPA
TPRSQVLKLSKSLSRSSKKTCSICLASMKRGDGHAIFTAECSHSFHFQCIASNVKHGNQV
CPVCRAEWKEIPLQFPSLDPPIGRARVNPVDWPQNNALMTVIRRLPTTRPTPNRHISPLF
QAPEPAIFDDDESLGHQLNSTEKSASDKSSIDSCESCDNRKVKIETYPEVPAVSRSSASD
NFTVLVQLKAPGSVSVQEPGKNQVNLSQVSQTPRAPVDLVTVLDISGSMAGTKLALLKRA
MGFVIQNLGPNDRLAVIAFSSTARRLFPLRRMSETGRQQALQAVNSLVANGGTNIAEGLR
KGAKIMEDRKEKNSVTSIILLSDGQDTYTVSNNSGSRQQQPNYKLLLPLSIHGGNSSGFK
IPVHAFGFGADHDASSMHSISEISGGTFSFIETEGVIQDAFAQCIGGLLSVVVKELQVSI
ECLHPGVRLSSLKAGSYPNCLMSDGHMGTIDVGDLYADEERDFLVSINIPTESSCAETSL
LKVKCVYVDPFTKEKVSIRSEDLRIKRPEKAGQESVLIEVDRQQNRVRVAEAMAQARAAA
EKGDLVGATSILENSRKLLSESQSAKSHDRLCVALDAELKEMQERMASRNVYEASGRAYI
LSGLSSHSWQRATARGDSTGGSSLVQAYQTPSMAEMVTRSQATLLASPSAQRNVQPVWSF
ASQPKPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400059986
Transcript Infomation

pacid=37442988 locus=PGSC0003DMG400023339 ID=PGSC0003DMT400059986.v4.03 annot-version=v4.03
Sequence

ATGGTAAGCAAATGGGGAAAAGTGAAATTGGCTCTTGGTTTGAATCTTTGTACTTATGTT
CCTAAAAAAACACTGGATGAAAATGATGATAGTGGTAGTTCAACAGTTTCTGAATCAGAG
AGGCATTCCGGCGCCGCCCTTATATCTCCGGCGACGGCTGACTGGGATGTTGCTCCGGCG
ACCCCAAGGTCACAAGTGTTGAAGCTCTCCAAGAGCTTAAGTAGATCTTCTAAGAAAACA
TGCTCAATATGTTTGGCTTCAATGAAGAGAGGGGATGGCCATGCTATATTCACCGCTGAA
TGTTCACATTCGTTTCACTTCCAGTGTATTGCTTCAAACGTGAAACATGGAAATCAAGTT
TGCCCAGTTTGCAGGGCAGAATGGAAAGAAATTCCTCTGCAGTTTCCCAGCCTAGATCCT
CCTATTGGGAGGGCTAGAGTCAATCCTGTGGACTGGCCCCAAAATAATGCACTAATGACT
GTAATACGTCGTTTACCAACAACCCGCCCAACACCAAATCGGCATATTTCCCCTCTATTT
CAGGCTCCTGAGCCAGCCATCTTTGATGATGATGAATCTTTGGGTCATCAACTCAATTCT
ACTGAGAAAAGTGCTTCTGATAAGAGTTCAATAGATAGTTGTGAGTCTTGTGACAACAGA
AAAGTAAAGATTGAAACTTACCCTGAGGTTCCGGCAGTCTCAAGGTCCAGTGCTTCAGAT
AACTTTACTGTGTTAGTCCAGCTAAAGGCTCCTGGTTCAGTCTCAGTACAAGAACCAGGC
AAAAACCAGGTAAATTTGTCTCAGGTTTCCCAAACGCCTCGTGCTCCTGTTGACCTTGTC
ACAGTTCTTGACATCAGTGGAAGTATGGCTGGCACCAAACTAGCATTACTAAAACGAGCT
ATGGGTTTTGTGATACAGAATCTCGGTCCCAATGATAGGCTGGCAGTAATTGCCTTCTCT
TCGACTGCTCGCCGCCTCTTCCCTCTTCGTAGGATGTCTGAGACAGGACGGCAGCAAGCA
CTCCAAGCTGTAAACTCCCTGGTTGCAAATGGAGGGACAAATATTGCTGAAGGCTTGAGA
AAGGGTGCCAAGATAATGGAAGACCGTAAGGAAAAGAACTCTGTTACTAGTATAATACTG
TTGTCTGATGGTCAAGACACATACACAGTCAGCAATAATTCTGGTAGTAGACAGCAGCAA
CCTAACTACAAGCTGCTTCTACCCTTGTCCATTCATGGTGGAAACAGTTCAGGGTTTAAA
ATACCAGTACATGCTTTCGGGTTTGGTGCTGATCACGATGCTTCATCAATGCATTCGATA
TCAGAGATTTCAGGAGGAACGTTTTCATTTATTGAGACAGAAGGTGTCATACAGGATGCT
TTTGCTCAATGCATTGGAGGCCTTCTCAGTGTTGTAGTCAAGGAGCTTCAGGTAAGCATC
GAGTGTCTTCACCCAGGTGTCCGTCTTAGCTCTTTAAAAGCAGGAAGCTATCCAAACTGC
TTAATGTCTGATGGACACATGGGAACAATTGATGTTGGAGATTTATATGCTGATGAAGAG
AGGGATTTTCTGGTTTCAATCAATATCCCTACTGAATCTTCATGTGCAGAAACATCATTG
TTAAAGGTTAAGTGTGTATACGTGGATCCTTTCACGAAAGAGAAGGTTTCCATCAGAAGC
GAAGATCTTAGGATCAAGAGACCTGAAAAGGCTGGACAAGAGAGTGTTTTAATTGAAGTA
GACAGGCAGCAGAACAGGGTCCGAGTTGCCGAGGCAATGGCACAGGCACGAGCTGCTGCT
GAGAAAGGAGACCTAGTTGGTGCGACTTCCATCCTAGAGAACTCCAGAAAGTTGTTGTCA
GAGTCACAGTCTGCTAAATCTCATGATCGGCTTTGTGTTGCACTTGATGCTGAGCTCAAG
GAGATGCAGGAGAGGATGGCAAGCAGAAATGTATACGAAGCATCAGGAAGGGCATATATC
TTGTCAGGGCTGAGCTCACACTCGTGGCAAAGAGCAACAGCACGAGGTGACTCCACAGGT
GGATCAAGTCTTGTCCAAGCCTATCAAACCCCTTCCATGGCTGAGATGGTAACTCGATCT
CAGGCTACATTACTGGCTAGCCCTTCAGCTCAAAGAAATGTTCAACCAGTGTGGTCATTT
GCATCACAACCAAAGCCTAGGTAA