Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059980
CDS Infomation

pacid=37442810 polypeptide=PGSC0003DMP400040342 locus=PGSC0003DMG402023336 ID=PGSC0003DMT400059980.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCCTGAACGACGAAGGAGTTATCTGAAACAGGATGACCTAGACTTAAAGTTT
GACGATGACTGGGAAGGGGATGATAAGAGAAAATACAGGTCAAGTAAGTCAAGGCCTGGC
AACAGTGAAGAAGCTGAAGGTTTAGATAGTAATGAAAGAAGGAGAAGTACATTGGAAAGA
AATGAGAGTCGGAAAAGATCAGGAGGATCAAGCAAAGCTGATATTGGTGAGGATGACTAT
GAGGCTGAAAACGACTTGCGGTCCAAATTGACAAAGAAGAAACACGGTGAGAATACATTG
GAGACATTGAGCAATTGGTATCAGGATGGAGAACTTGGGGGCAAGTATGATAATGGAGAT
AAAACAGGGGATAGAGGACAAATCCTAGCTAATGATGGTGTCAGAAGGAAATCAACTTCC
AGGTTTTCTGATGGTGATGGTTCCCAGACAAGAAATAAAGGTAATAATGAGAAGCTACAT
GGTGGGGACTCTGGAAATGCACTGGAAAGGGATTCTAGACATTTGGAAAGAAAGGACAGT
ACCACAGAAAAGGGTCATGTGTTGTTAGATAGCCTTAAAGAGTCAAATAGAGACAAGAAT
GGTAAATACCCAGAAAGTGACGAGAGAAAAATTGACTATGATAGGATTAAGAAAGGCAGG
TCGTATGCTATAGAGGAAGACAGAGGAGGAGCATTTTCTATACGGGACGATAAATTGAGC
ATAGAGAGATTTGAGGAGCATAGACAGCTAAAAGGTGCCACAAGTCATGACATTGCGGAA
AGCCGTGAAAGGTCTGCGGTCGCAGGTGATGACGGTGGCTCACGGGTGCGAGAGAGAACT
AGGAGAGAGTTGGACTCCTCTGATAGGCCCAGGACACCTGAGAAGGGTGGAAGACGCCAT
TACGATTTAGAAAGCGTTGAGATGGAATATGAAAAAAGAGATACTTTCAGGAGGAAAGAA
CAAGAAAAAGATGGTGCGAGAGATGATAAATCAAAAGGAAGGGATGATGGCAGGAGCGAT
AGAAACAGAGTTAGGGATGGGTCCAAAGATGGGTGGAAAAGAAGGCAAGGGAACTTTGTT
GACAAGGAAATAAAAGAAGGTGAGACACCTTATGAACATGGAAGAGAGTGGGAAATGCCC
CGACGTGGGTGGATTGACAATGAAAGGCCTCGTTCTGGTGGTAGAAAAGATGGAAATAGG
ACTGAAGCCTTGAAAACTTCATCGAAATATGGAATTTCAAATGACAATTATGATGTCATA
GAGATCCAAACCAGGCCATTTGACTATGGTAGGGAGGAGGCCATATCTTCAGCAGCAAGA
ACAACTGAAGTTAATCAGAGTTCTGATGCAAAATCAGTTCCAGATGATGAGAACTATGCC
TTTCCTAGGGATGACAGGGGAAGAAACATGAATTGGTCAGGCCAATCTGCTCAAGATATA
AAGAATACATCAGGTGATGGTTCATATAGGGATGAGACTGAATCAAGGCCCCAGAAAGGA
GATGCATCTGTTCGAGCTGCCTTCGGCCAAACTTCCAATAGTGGTTCAGAACCTCCATAT
GGAAACCAGGAACCATCTTCCTTCAATAGAGATGTTCCAATGGGTTCTAAAGGAAGTAGG
GTTGGGAGAGGAGGAAGAGGGAGGCCCACAGGAAGAGATGGCCACCAGTTTGGACCTCCA
ATGCCAATGATGGGATCACCTTTTGGACCACTTGGAATGCCATCACCTGGATCTTTGCAG
TCTTTAGCTCCTAACATGTCACCTGCTCCAGGTCCTCCAATGGCTCCTGGTGTTTTCATT
CCTCCATTTTCACCTCCTGTGGTTTGGCCTGGAGCCCGAGGTCTTGAGATGAATATGCTA
GGTGTTCCACCTGGACTCTCACCTGTGCTTCCTGGGACTGGATTCCCTCCTAATTTGGGG
AATCCAATGTATTTTAATCAATCTGGCCCTGGAAGAGGGACACCGCCAAATATGTCTGGT
CCAAATTTTAATGGCCTAATACCAGGAGGTCATGGACAGGTTAAAGATAAAGCTAATGCT
GGCTGGGTGCCTCATCGAACTAATGCCCCACCTGGCAAAGCTCCTTCTAGGGGTGAGCAG
AATGACTACTCCCAAAATTTTGTAGACACTGGCACGAGGCCTCAAAATTTTATCAGGGAA
CTAGAACTTACCAGTGTTGTTGAGGACTATCCCAAGCTTCGAGAACTTATTCAAAGGAAG
GATGAGATTGTTGTCAATTCTTCTTCGCCTCCCATGTATTTCAAATGCGACCTGCTTGAG
CATGAGCTGTCACCGGATTTTTTTGGGACCAAATTTGATGTCATTCTAATAGACCCCCCA
TGGGAGGAATATGTTCATCGAGCTCCTGGTGTCACTGACCATATGGAGTACTGGACGTTT
GAGGAAATAATGAATCTCAAAATTGAGGCAATTGCTGACACTCCATCATTTGTTTTTCTT
TGGGTTGGTGATGGTGTGGGGCTTGAGCAAGGACGGCAATGTTTGAAGAAGTGGGGATTC
CGCAGATGTGAGGACATATGTTGGGTGAAAACAAACAAAACCAATGCAACTCCAGGATTA
CGGCATGATTCCCATACTTTATTTCAGCATACAAAGGAACACTGCCTTTTGGGCATAAAA
GGAACTGTTCGTCGTAGTACCGATGGGCATATAATTCATGCAAATATTGACACAGATGTG
ATTATTGCTGAGGAACCTCCTTATGGATCAACTGTAAAGCCTGAAGATATGTACCGTATA
ATTGAACATTTTGCGCTTGGCCGGAGAAGGCTTGAGCTCTTTGGTGAAGACCATAATATT
CGATCTGGCTGGTTGACTGTTGGTAAAGGATTATCTTCATCGAACTTCAGTGCAGAGACC
TATGTGCGGAATTTTGCCGATAGGGATGGTAAAGTCTGGCAGGGTGGGGGAGGAAGGAAT
CCACCACCAGGCGCCCCACATCTTGTTATTACAACACCTGAAATAGAGTCTCTTCGGCCC
AAGTCACCAATGAAGAATCAGCAGCAACAGACAGCATCTATATCTGTGATGACAACAAAC
TCTTCCAACAAGAGGCCAGCCGGTAACTCACCCCAGAATAATAATAATTCGCAAAACGTG
AACCAAGAAGCCTCTAGCTCTAACAACCCCAACACAGGCCCTTGGGTTCCACCGATGGAG
AGTTTTCAAGGGAGAGAGGGTGGACATATGATATCGGATAATAGGCATTTCGATATGTAT
GGGTATAATACTGCCTTTAGACAGTCCAACACTGAAAGTTCAGAGTATGAATCTCATAAT
GCAATGAATTTATTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040342
PEP Infomation

pacid=37442810 transcript=PGSC0003DMT400059980 locus=PGSC0003DMG402023336 ID=PGSC0003DMT400059980.v4.03 annot-version=v4.03
Sequence

MASPERRRSYLKQDDLDLKFDDDWEGDDKRKYRSSKSRPGNSEEAEGLDSNERRRSTLER
NESRKRSGGSSKADIGEDDYEAENDLRSKLTKKKHGENTLETLSNWYQDGELGGKYDNGD
KTGDRGQILANDGVRRKSTSRFSDGDGSQTRNKGNNEKLHGGDSGNALERDSRHLERKDS
TTEKGHVLLDSLKESNRDKNGKYPESDERKIDYDRIKKGRSYAIEEDRGGAFSIRDDKLS
IERFEEHRQLKGATSHDIAESRERSAVAGDDGGSRVRERTRRELDSSDRPRTPEKGGRRH
YDLESVEMEYEKRDTFRRKEQEKDGARDDKSKGRDDGRSDRNRVRDGSKDGWKRRQGNFV
DKEIKEGETPYEHGREWEMPRRGWIDNERPRSGGRKDGNRTEALKTSSKYGISNDNYDVI
EIQTRPFDYGREEAISSAARTTEVNQSSDAKSVPDDENYAFPRDDRGRNMNWSGQSAQDI
KNTSGDGSYRDETESRPQKGDASVRAAFGQTSNSGSEPPYGNQEPSSFNRDVPMGSKGSR
VGRGGRGRPTGRDGHQFGPPMPMMGSPFGPLGMPSPGSLQSLAPNMSPAPGPPMAPGVFI
PPFSPPVVWPGARGLEMNMLGVPPGLSPVLPGTGFPPNLGNPMYFNQSGPGRGTPPNMSG
PNFNGLIPGGHGQVKDKANAGWVPHRTNAPPGKAPSRGEQNDYSQNFVDTGTRPQNFIRE
LELTSVVEDYPKLRELIQRKDEIVVNSSSPPMYFKCDLLEHELSPDFFGTKFDVILIDPP
WEEYVHRAPGVTDHMEYWTFEEIMNLKIEAIADTPSFVFLWVGDGVGLEQGRQCLKKWGF
RRCEDICWVKTNKTNATPGLRHDSHTLFQHTKEHCLLGIKGTVRRSTDGHIIHANIDTDV
IIAEEPPYGSTVKPEDMYRIIEHFALGRRRLELFGEDHNIRSGWLTVGKGLSSSNFSAET
YVRNFADRDGKVWQGGGGRNPPPGAPHLVITTPEIESLRPKSPMKNQQQQTASISVMTTN
SSNKRPAGNSPQNNNNSQNVNQEASSSNNPNTGPWVPPMESFQGREGGHMISDNRHFDMY
GYNTAFRQSNTESSEYESHNAMNLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400059980
Transcript Infomation

pacid=37442810 locus=PGSC0003DMG402023336 ID=PGSC0003DMT400059980.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCCTGAACGACGAAGGAGTTATCTGAAACAGGATGACCTAGACTTAAAGTTT
GACGATGACTGGGAAGGGGATGATAAGAGAAAATACAGGTCAAGTAAGTCAAGGCCTGGC
AACAGTGAAGAAGCTGAAGGTTTAGATAGTAATGAAAGAAGGAGAAGTACATTGGAAAGA
AATGAGAGTCGGAAAAGATCAGGAGGATCAAGCAAAGCTGATATTGGTGAGGATGACTAT
GAGGCTGAAAACGACTTGCGGTCCAAATTGACAAAGAAGAAACACGGTGAGAATACATTG
GAGACATTGAGCAATTGGTATCAGGATGGAGAACTTGGGGGCAAGTATGATAATGGAGAT
AAAACAGGGGATAGAGGACAAATCCTAGCTAATGATGGTGTCAGAAGGAAATCAACTTCC
AGGTTTTCTGATGGTGATGGTTCCCAGACAAGAAATAAAGGTAATAATGAGAAGCTACAT
GGTGGGGACTCTGGAAATGCACTGGAAAGGGATTCTAGACATTTGGAAAGAAAGGACAGT
ACCACAGAAAAGGGTCATGTGTTGTTAGATAGCCTTAAAGAGTCAAATAGAGACAAGAAT
GGTAAATACCCAGAAAGTGACGAGAGAAAAATTGACTATGATAGGATTAAGAAAGGCAGG
TCGTATGCTATAGAGGAAGACAGAGGAGGAGCATTTTCTATACGGGACGATAAATTGAGC
ATAGAGAGATTTGAGGAGCATAGACAGCTAAAAGGTGCCACAAGTCATGACATTGCGGAA
AGCCGTGAAAGGTCTGCGGTCGCAGGTGATGACGGTGGCTCACGGGTGCGAGAGAGAACT
AGGAGAGAGTTGGACTCCTCTGATAGGCCCAGGACACCTGAGAAGGGTGGAAGACGCCAT
TACGATTTAGAAAGCGTTGAGATGGAATATGAAAAAAGAGATACTTTCAGGAGGAAAGAA
CAAGAAAAAGATGGTGCGAGAGATGATAAATCAAAAGGAAGGGATGATGGCAGGAGCGAT
AGAAACAGAGTTAGGGATGGGTCCAAAGATGGGTGGAAAAGAAGGCAAGGGAACTTTGTT
GACAAGGAAATAAAAGAAGGTGAGACACCTTATGAACATGGAAGAGAGTGGGAAATGCCC
CGACGTGGGTGGATTGACAATGAAAGGCCTCGTTCTGGTGGTAGAAAAGATGGAAATAGG
ACTGAAGCCTTGAAAACTTCATCGAAATATGGAATTTCAAATGACAATTATGATGTCATA
GAGATCCAAACCAGGCCATTTGACTATGGTAGGGAGGAGGCCATATCTTCAGCAGCAAGA
ACAACTGAAGTTAATCAGAGTTCTGATGCAAAATCAGTTCCAGATGATGAGAACTATGCC
TTTCCTAGGGATGACAGGGGAAGAAACATGAATTGGTCAGGCCAATCTGCTCAAGATATA
AAGAATACATCAGGTGATGGTTCATATAGGGATGAGACTGAATCAAGGCCCCAGAAAGGA
GATGCATCTGTTCGAGCTGCCTTCGGCCAAACTTCCAATAGTGGTTCAGAACCTCCATAT
GGAAACCAGGAACCATCTTCCTTCAATAGAGATGTTCCAATGGGTTCTAAAGGAAGTAGG
GTTGGGAGAGGAGGAAGAGGGAGGCCCACAGGAAGAGATGGCCACCAGTTTGGACCTCCA
ATGCCAATGATGGGATCACCTTTTGGACCACTTGGAATGCCATCACCTGGATCTTTGCAG
TCTTTAGCTCCTAACATGTCACCTGCTCCAGGTCCTCCAATGGCTCCTGGTGTTTTCATT
CCTCCATTTTCACCTCCTGTGGTTTGGCCTGGAGCCCGAGGTCTTGAGATGAATATGCTA
GGTGTTCCACCTGGACTCTCACCTGTGCTTCCTGGGACTGGATTCCCTCCTAATTTGGGG
AATCCAATGTATTTTAATCAATCTGGCCCTGGAAGAGGGACACCGCCAAATATGTCTGGT
CCAAATTTTAATGGCCTAATACCAGGAGGTCATGGACAGGTTAAAGATAAAGCTAATGCT
GGCTGGGTGCCTCATCGAACTAATGCCCCACCTGGCAAAGCTCCTTCTAGGGGTGAGCAG
AATGACTACTCCCAAAATTTTGTAGACACTGGCACGAGGCCTCAAAATTTTATCAGGGAA
CTAGAACTTACCAGTGTTGTTGAGGACTATCCCAAGCTTCGAGAACTTATTCAAAGGAAG
GATGAGATTGTTGTCAATTCTTCTTCGCCTCCCATGTATTTCAAATGCGACCTGCTTGAG
CATGAGCTGTCACCGGATTTTTTTGGGACCAAATTTGATGTCATTCTAATAGACCCCCCA
TGGGAGGAATATGTTCATCGAGCTCCTGGTGTCACTGACCATATGGAGTACTGGACGTTT
GAGGAAATAATGAATCTCAAAATTGAGGCAATTGCTGACACTCCATCATTTGTTTTTCTT
TGGGTTGGTGATGGTGTGGGGCTTGAGCAAGGACGGCAATGTTTGAAGAAGTGGGGATTC
CGCAGATGTGAGGACATATGTTGGGTGAAAACAAACAAAACCAATGCAACTCCAGGATTA
CGGCATGATTCCCATACTTTATTTCAGCATACAAAGGAACACTGCCTTTTGGGCATAAAA
GGAACTGTTCGTCGTAGTACCGATGGGCATATAATTCATGCAAATATTGACACAGATGTG
ATTATTGCTGAGGAACCTCCTTATGGATCAACTGTAAAGCCTGAAGATATGTACCGTATA
ATTGAACATTTTGCGCTTGGCCGGAGAAGGCTTGAGCTCTTTGGTGAAGACCATAATATT
CGATCTGGCTGGTTGACTGTTGGTAAAGGATTATCTTCATCGAACTTCAGTGCAGAGACC
TATGTGCGGAATTTTGCCGATAGGGATGGTAAAGTCTGGCAGGGTGGGGGAGGAAGGAAT
CCACCACCAGGCGCCCCACATCTTGTTATTACAACACCTGAAATAGAGTCTCTTCGGCCC
AAGTCACCAATGAAGAATCAGCAGCAACAGACAGCATCTATATCTGTGATGACAACAAAC
TCTTCCAACAAGAGGCCAGCCGGTAACTCACCCCAGAATAATAATAATTCGCAAAACGTG
AACCAAGAAGCCTCTAGCTCTAACAACCCCAACACAGGCCCTTGGGTTCCACCGATGGAG
AGTTTTCAAGGGAGAGAGGGTGGACATATGATATCGGATAATAGGCATTTCGATATGTAT
GGGTATAATACTGCCTTTAGACAGTCCAACACTGAAAGTTCAGAGTATGAATCTCATAAT
GCAATGAATTTATTGTAG