Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059923
CDS Infomation

pacid=37429402 polypeptide=PGSC0003DMP400040298 locus=PGSC0003DMG400023310 ID=PGSC0003DMT400059923.v4.03 annot-version=v4.03
Sequence

ATGGTGAATTCTCCATCATCGGAGCATGATGGCGTCGTAGAAATCAACAAACATGTACCC
CAGGATCGAGAATCCAATCGTCTATTATCTGACAATGATGGTGATGACGATAATGATAAG
AATAAAATTTTGGCCATTGAAATAGACAGAGCTGAGGCCCTTGATGTGGTCCCGCATTTC
TCATGGAAGAAGTTATGGGAGTTTACAGGGCCTGGATTTTTAATGAGTGTTGCATTTCTC
GATCCAGGGAATTTGGAGGGAGATTTGCAGGCTGGAGCTATCGCGGGCTACTCATTGCTA
TGGTTACTTATGTGGTCTACTTTCATGGGGTTGCTCATTCAGTTGTTGTCCCTTAGGTTG
GGTGTTGCTACGGGACGGCATTTGGCTGAGATCTGCCGGGAGGAGTACCCGAATTGGGCG
AGGATTTTGCTTTGGTTAATGGCGGAGGTGGCATTGATTGGAGCTGATATTCAGGAAGTT
ATAGGAAGTGCTATTGCTATTAAGATACTTAGTCAAGGGGTTATTCCTCTTTGGGGTGGT
GTACTCATTACTGCTTCTGATTGCTTCATCTTCTTATTTCTGGAAAATTATGGAGTTCGG
AAACTAGAAGCGTTTTTCGCTGTTCTAATTTCCACTATGGCATTATCATTTGCCTGGATG
TTTGCTGAAACTAGGCCTAGTAGCAAGGAACTCATAATAGGTCTGTTGCTACCTAGACTC
AGCTCAAAGACAATTCAGACGGCTGTTGGAGTTGTTGGTTGTGTCATAACTCCTCACAAT
GTATTTCTATACTCCGCTTTGGTGCAGTCTAGAAAAATTGATCCCAAAAAGAAAGACAAA
GTGCAAGAGGCACTGAACTACTACTCAATCGAGTTTTACATTGCTGTTTTTATTTCGTTC
TCTATCAATTTGATGGTAACAGCTGTGTTCGCTAAGGGTTTTTATGGAACTTCACAAGCT
GATAGTATAGGCCTAGTAAATGCAGGGCAATATCTTCAAGAAAGATATGGTGGAGGGTTT
TTCCCAATTCTCTACATATGGGGCATTGGCCTTTTGGCAGCTGGTCAAAGTAGCACCATG
ACAGGTACTTATGCTGGACAGTTTATAATGGAAGGCTTTCTGAATCTGCGGATGAAGAAA
TGGATAAGGTCAGTGATTACGAGGAGTTGTGCCATTGTACCAACCATAATCGTGGCCATC
TATTTCAACAGATCAGAAGATTCACTCGATGTTCTGAACGAATGGCTAAACGTGCTTCAA
GGCATGCAGATCCCATTTGCTATCATTCCACTTCTAACATTAGTGTCAAATGAAAAAATC
ATGGGAATCTTCAAGATTGGGAAGCTCATGGAGAGAACTGTGTGGACAGTAGCTGCCCTG
GTAATAATGATCAATGGATATGTCATGTTGAGCTTCTTCCTTTCTGAAGTTAATGGCCTG
TTGTTTGGTTTTGTGGCTTGCCTGGGAGCTTCTGCATATGTGGCTTTTCTTGTATATCTC
ATTTCCCAACGTCATAACCGTGCAGAGTTGAATGGATTTACTCACCTTACAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040298
PEP Infomation

pacid=37429402 transcript=PGSC0003DMT400059923 locus=PGSC0003DMG400023310 ID=PGSC0003DMT400059923.v4.03 annot-version=v4.03
Sequence

MVNSPSSEHDGVVEINKHVPQDRESNRLLSDNDGDDDNDKNKILAIEIDRAEALDVVPHF
SWKKLWEFTGPGFLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTFMGLLIQLLSLRL
GVATGRHLAEICREEYPNWARILLWLMAEVALIGADIQEVIGSAIAIKILSQGVIPLWGG
VLITASDCFIFLFLENYGVRKLEAFFAVLISTMALSFAWMFAETRPSSKELIIGLLLPRL
SSKTIQTAVGVVGCVITPHNVFLYSALVQSRKIDPKKKDKVQEALNYYSIEFYIAVFISF
SINLMVTAVFAKGFYGTSQADSIGLVNAGQYLQERYGGGFFPILYIWGIGLLAAGQSSTM
TGTYAGQFIMEGFLNLRMKKWIRSVITRSCAIVPTIIVAIYFNRSEDSLDVLNEWLNVLQ
GMQIPFAIIPLLTLVSNEKIMGIFKIGKLMERTVWTVAALVIMINGYVMLSFFLSEVNGL
LFGFVACLGASAYVAFLVYLISQRHNRAELNGFTHLTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400059923
Transcript Infomation

pacid=37429402 locus=PGSC0003DMG400023310 ID=PGSC0003DMT400059923.v4.03 annot-version=v4.03
Sequence

ATGGTGAATTCTCCATCATCGGAGCATGATGGCGTCGTAGAAATCAACAAACATGTACCC
CAGGATCGAGAATCCAATCGTCTATTATCTGACAATGATGGTGATGACGATAATGATAAG
AATAAAATTTTGGCCATTGAAATAGACAGAGCTGAGGCCCTTGATGTGGTCCCGCATTTC
TCATGGAAGAAGTTATGGGAGTTTACAGGGCCTGGATTTTTAATGAGTGTTGCATTTCTC
GATCCAGGGAATTTGGAGGGAGATTTGCAGGCTGGAGCTATCGCGGGCTACTCATTGCTA
TGGTTACTTATGTGGTCTACTTTCATGGGGTTGCTCATTCAGTTGTTGTCCCTTAGGTTG
GGTGTTGCTACGGGACGGCATTTGGCTGAGATCTGCCGGGAGGAGTACCCGAATTGGGCG
AGGATTTTGCTTTGGTTAATGGCGGAGGTGGCATTGATTGGAGCTGATATTCAGGAAGTT
ATAGGAAGTGCTATTGCTATTAAGATACTTAGTCAAGGGGTTATTCCTCTTTGGGGTGGT
GTACTCATTACTGCTTCTGATTGCTTCATCTTCTTATTTCTGGAAAATTATGGAGTTCGG
AAACTAGAAGCGTTTTTCGCTGTTCTAATTTCCACTATGGCATTATCATTTGCCTGGATG
TTTGCTGAAACTAGGCCTAGTAGCAAGGAACTCATAATAGGTCTGTTGCTACCTAGACTC
AGCTCAAAGACAATTCAGACGGCTGTTGGAGTTGTTGGTTGTGTCATAACTCCTCACAAT
GTATTTCTATACTCCGCTTTGGTGCAGTCTAGAAAAATTGATCCCAAAAAGAAAGACAAA
GTGCAAGAGGCACTGAACTACTACTCAATCGAGTTTTACATTGCTGTTTTTATTTCGTTC
TCTATCAATTTGATGGTAACAGCTGTGTTCGCTAAGGGTTTTTATGGAACTTCACAAGCT
GATAGTATAGGCCTAGTAAATGCAGGGCAATATCTTCAAGAAAGATATGGTGGAGGGTTT
TTCCCAATTCTCTACATATGGGGCATTGGCCTTTTGGCAGCTGGTCAAAGTAGCACCATG
ACAGGTACTTATGCTGGACAGTTTATAATGGAAGGCTTTCTGAATCTGCGGATGAAGAAA
TGGATAAGGTCAGTGATTACGAGGAGTTGTGCCATTGTACCAACCATAATCGTGGCCATC
TATTTCAACAGATCAGAAGATTCACTCGATGTTCTGAACGAATGGCTAAACGTGCTTCAA
GGCATGCAGATCCCATTTGCTATCATTCCACTTCTAACATTAGTGTCAAATGAAAAAATC
ATGGGAATCTTCAAGATTGGGAAGCTCATGGAGAGAACTGTGTGGACAGTAGCTGCCCTG
GTAATAATGATCAATGGATATGTCATGTTGAGCTTCTTCCTTTCTGAAGTTAATGGCCTG
TTGTTTGGTTTTGTGGCTTGCCTGGGAGCTTCTGCATATGTGGCTTTTCTTGTATATCTC
ATTTCCCAACGTCATAACCGTGCAGAGTTGAATGGATTTACTCACCTTACAAATTGA