Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059856
CDS Infomation

pacid=37465935 polypeptide=PGSC0003DMP400040262 locus=PGSC0003DMG400023282 ID=PGSC0003DMT400059856.v4.03 annot-version=v4.03
Sequence

ATGTCTAGAATTCAAACTCTCCATTCCCTCCAAATCCTTGTTATTTTCTTGAAGTTTCTT
GTTTTCTCTAATTCATTGTCTGTTGAGACAGAAGCACTTCTTGAATTTAAAAAGCATCTT
GTTGACCCTTTGAATGTCTTGGAATCTTGGAAATATTCAGATTCCCCGTGTAAATTCTAT
GGTATTCAATGTGACAAACACACTGGCTTGGTCACTGAAATTTCACTTGACAATAAGTCC
CTTTATGGAATTATTTCCCCTTCAATATCTGTCCTCCAAAGCCTTACTTCTCTAGTGCTT
CCTTCAAATTACCTGTCTGGAAATCTTCCAAGTGAATTGGCGGATTGCACCAATCTCAAA
GTATTGAATGTTACTGACAATAACATGAACGGTACGATACCTGATTTATCTAGCTTGGCT
AAGTTGGAGGTGTTAGACTTGTCAGATAACTGTTTTTCTGGAAAGTTTCCAGCTTGGTTT
GGAAAGTTGACTAGTTTGGTTGCATTAGGCCTTGGTGGAAATGAGTATGATGAAGGTAAA
CTTCCTGATTTATTTGGGAAGTTAAAGAAAGTTTATTGGCTTTTCTTGGCAGGGTCAAAT
TTGACAGGACAAATCCCGGAATCTATTTTCGAAATGAAGGCACTAGGTACATTAGATATT
TCGAAAAACCAGATATCCGGGAATTTTCCAAAGTCGATAAACAAGCTGCGAAATCTCTTC
AAGATTGAACTTTATCAAAACAATTTGACCGGGGAATTGCCAGTAGAACTTGTAGACCTT
ATACATCTGCAGGAAATTGATGTTTCTAGAAACCAGCTGCATGGGACTTTGCCTAAGGGG
ATTGACAACCTGAAGAATATAACGGTTTTTCAAATATTCAAGAACAATTTCTCTGGGGAA
ATCCCTCCAGGCTTTGGAGATTTGCAGCATCTTAATGGCTTTGCTGTGTACAACAACAGT
TTTACTGGAGAAATTCCAGCTAATCTTGGCCGGTTTTCGCCACTGAATAGCATAGACATA
TCTGAGAACAAGTTTAGTGGTGCATTTCCAAAATATTTATGTCAAAACAACAACTTGCAA
AATTTGCTTGCTGTTGAAAACAGTTTCACAGGGGAGTTTCCAGGTAATTATGCTTCTTGC
AAGACTTTAATGAGATTGAGGGTGAGTCAGAATCAACTTTCTGGGAGAATTGCTGAGGGT
TTATGGGGGCTTCCAGAAGTCACAATGATAGATTTCAGTGATAACAACTTCACTGGAACT
GTATCTCCTGGAATCGGCGCTGCGACTAAGTTGAATCAGTTGGTATTATCAAACAACAGA
TTTGCAGGTGAGCTTCCAAAAGAACTTGGAAAGCTCACACAGTTGGAAAGGCTATATTTG
GATAACAATGAATTCTCTGGCATAATACCATCTGAACTTGGCTCATTGAAGCAAATTTCA
TCTTTGTATTTAGAGAAAAACTCACTTTCCGGGTCGATACCATCGGAGTTGGGTGAGTTT
CCTAGGTTGGCAAACTTGAATCTTGCTTCAAATCTTCTCACAGGCAACATACCGAATTCG
TTGTCAATGATGGCCTCGTTGAACTCTCTGAATCTTTCGAGTAACAAACTCAGTGGCTCA
ATTCCAACAAGCTTGGATAACCTGAAGTTATCTTCATTGGACCTCTCTAACAATCAGCTA
ACTGGAAGAGTTCCTACAGATCTTTTGACGGTGGGAGGAGAAACGGCATTTATAGGAAAC
AAGGGGCTTTGTGTTGATCAAAGCATCAGGAATGTCCGAAGGAACTCAAGCATCGGCGCT
TGTAGTGGAAAGGCTGCTCAGGAAGTGTTCATGAAGAGCAAACTAGTTGTGTTTTGCATT
GTATTACTTTCTTTGGCTGTTCTAATGGGTGTTTTCATGCTTGTGAGTTACTGGAAGTAC
AAGTGCAATGCTGAAGCTGATTCAGAAAAGTGTCTGGGACATTCAAATGGAATGAATCCA
AAATGGAAGCTTGAAAGCTTCCAACATGTGGAACTTGATATAGATGAAATATGTGATGTT
GGTGAGGACAAGCTGGTAGGAAGTGGGGGCACAGGAAAAGTTTATCGGTTAGATTTGAAG
AAAGGTTGTGGCACAGTGGCAGTAAAGCAGCTTTGGAAAGGAAATGAGGTGAAAGTTTTG
ACAAGGGAAATGGACATTCTAGGAAAGATCAGGCATCGAAATATAGTTAAACTGTATGCC
AGTCTAATGAGAGAAGGTTCGAATATGCTGGTTTTCGAGTACTTGCCAAATGGTAATTTA
TTCGAGGCACTACACCGGGAAGTCAAGGCTGGGAAGACAGAATTAGATTGGTACCAGAGG
TATAAAATTGCAGTTGGAACTGCAAAGGGAATCGCTTATTTGCACCATGATTGTGTCCCG
CCTATTATTCATAGAGATATCAAGTCAACAAACATTCTACTTGATGAGGAGTATGAAGCA
AAAGTTTCTGATTTCGGGGTTGCAAAAGTTTCAGAAATTTCCTCTAGAGTCTCCGAGTTC
AGCTGCTTTGCAGGCACTCACGGCTATTTAGCTCCTGGTATGTTTCAAAGAGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400040262
PEP Infomation

pacid=37465935 transcript=PGSC0003DMT400059856 locus=PGSC0003DMG400023282 ID=PGSC0003DMT400059856.v4.03 annot-version=v4.03
Sequence

MSRIQTLHSLQILVIFLKFLVFSNSLSVETEALLEFKKHLVDPLNVLESWKYSDSPCKFY
GIQCDKHTGLVTEISLDNKSLYGIISPSISVLQSLTSLVLPSNYLSGNLPSELADCTNLK
VLNVTDNNMNGTIPDLSSLAKLEVLDLSDNCFSGKFPAWFGKLTSLVALGLGGNEYDEGK
LPDLFGKLKKVYWLFLAGSNLTGQIPESIFEMKALGTLDISKNQISGNFPKSINKLRNLF
KIELYQNNLTGELPVELVDLIHLQEIDVSRNQLHGTLPKGIDNLKNITVFQIFKNNFSGE
IPPGFGDLQHLNGFAVYNNSFTGEIPANLGRFSPLNSIDISENKFSGAFPKYLCQNNNLQ
NLLAVENSFTGEFPGNYASCKTLMRLRVSQNQLSGRIAEGLWGLPEVTMIDFSDNNFTGT
VSPGIGAATKLNQLVLSNNRFAGELPKELGKLTQLERLYLDNNEFSGIIPSELGSLKQIS
SLYLEKNSLSGSIPSELGEFPRLANLNLASNLLTGNIPNSLSMMASLNSLNLSSNKLSGS
IPTSLDNLKLSSLDLSNNQLTGRVPTDLLTVGGETAFIGNKGLCVDQSIRNVRRNSSIGA
CSGKAAQEVFMKSKLVVFCIVLLSLAVLMGVFMLVSYWKYKCNAEADSEKCLGHSNGMNP
KWKLESFQHVELDIDEICDVGEDKLVGSGGTGKVYRLDLKKGCGTVAVKQLWKGNEVKVL
TREMDILGKIRHRNIVKLYASLMREGSNMLVFEYLPNGNLFEALHREVKAGKTELDWYQR
YKIAVGTAKGIAYLHHDCVPPIIHRDIKSTNILLDEEYEAKVSDFGVAKVSEISSRVSEF
SCFAGTHGYLAPGMFQRG*

Transcript Sequence

Transcript ID

PGSC0003DMT400059856
Transcript Infomation

pacid=37465935 locus=PGSC0003DMG400023282 ID=PGSC0003DMT400059856.v4.03 annot-version=v4.03
Sequence

ATGTCTAGAATTCAAACTCTCCATTCCCTCCAAATCCTTGTTATTTTCTTGAAGTTTCTT
GTTTTCTCTAATTCATTGTCTGTTGAGACAGAAGCACTTCTTGAATTTAAAAAGCATCTT
GTTGACCCTTTGAATGTCTTGGAATCTTGGAAATATTCAGATTCCCCGTGTAAATTCTAT
GGTATTCAATGTGACAAACACACTGGCTTGGTCACTGAAATTTCACTTGACAATAAGTCC
CTTTATGGAATTATTTCCCCTTCAATATCTGTCCTCCAAAGCCTTACTTCTCTAGTGCTT
CCTTCAAATTACCTGTCTGGAAATCTTCCAAGTGAATTGGCGGATTGCACCAATCTCAAA
GTATTGAATGTTACTGACAATAACATGAACGGTACGATACCTGATTTATCTAGCTTGGCT
AAGTTGGAGGTGTTAGACTTGTCAGATAACTGTTTTTCTGGAAAGTTTCCAGCTTGGTTT
GGAAAGTTGACTAGTTTGGTTGCATTAGGCCTTGGTGGAAATGAGTATGATGAAGGTAAA
CTTCCTGATTTATTTGGGAAGTTAAAGAAAGTTTATTGGCTTTTCTTGGCAGGGTCAAAT
TTGACAGGACAAATCCCGGAATCTATTTTCGAAATGAAGGCACTAGGTACATTAGATATT
TCGAAAAACCAGATATCCGGGAATTTTCCAAAGTCGATAAACAAGCTGCGAAATCTCTTC
AAGATTGAACTTTATCAAAACAATTTGACCGGGGAATTGCCAGTAGAACTTGTAGACCTT
ATACATCTGCAGGAAATTGATGTTTCTAGAAACCAGCTGCATGGGACTTTGCCTAAGGGG
ATTGACAACCTGAAGAATATAACGGTTTTTCAAATATTCAAGAACAATTTCTCTGGGGAA
ATCCCTCCAGGCTTTGGAGATTTGCAGCATCTTAATGGCTTTGCTGTGTACAACAACAGT
TTTACTGGAGAAATTCCAGCTAATCTTGGCCGGTTTTCGCCACTGAATAGCATAGACATA
TCTGAGAACAAGTTTAGTGGTGCATTTCCAAAATATTTATGTCAAAACAACAACTTGCAA
AATTTGCTTGCTGTTGAAAACAGTTTCACAGGGGAGTTTCCAGGTAATTATGCTTCTTGC
AAGACTTTAATGAGATTGAGGGTGAGTCAGAATCAACTTTCTGGGAGAATTGCTGAGGGT
TTATGGGGGCTTCCAGAAGTCACAATGATAGATTTCAGTGATAACAACTTCACTGGAACT
GTATCTCCTGGAATCGGCGCTGCGACTAAGTTGAATCAGTTGGTATTATCAAACAACAGA
TTTGCAGGTGAGCTTCCAAAAGAACTTGGAAAGCTCACACAGTTGGAAAGGCTATATTTG
GATAACAATGAATTCTCTGGCATAATACCATCTGAACTTGGCTCATTGAAGCAAATTTCA
TCTTTGTATTTAGAGAAAAACTCACTTTCCGGGTCGATACCATCGGAGTTGGGTGAGTTT
CCTAGGTTGGCAAACTTGAATCTTGCTTCAAATCTTCTCACAGGCAACATACCGAATTCG
TTGTCAATGATGGCCTCGTTGAACTCTCTGAATCTTTCGAGTAACAAACTCAGTGGCTCA
ATTCCAACAAGCTTGGATAACCTGAAGTTATCTTCATTGGACCTCTCTAACAATCAGCTA
ACTGGAAGAGTTCCTACAGATCTTTTGACGGTGGGAGGAGAAACGGCATTTATAGGAAAC
AAGGGGCTTTGTGTTGATCAAAGCATCAGGAATGTCCGAAGGAACTCAAGCATCGGCGCT
TGTAGTGGAAAGGCTGCTCAGGAAGTGTTCATGAAGAGCAAACTAGTTGTGTTTTGCATT
GTATTACTTTCTTTGGCTGTTCTAATGGGTGTTTTCATGCTTGTGAGTTACTGGAAGTAC
AAGTGCAATGCTGAAGCTGATTCAGAAAAGTGTCTGGGACATTCAAATGGAATGAATCCA
AAATGGAAGCTTGAAAGCTTCCAACATGTGGAACTTGATATAGATGAAATATGTGATGTT
GGTGAGGACAAGCTGGTAGGAAGTGGGGGCACAGGAAAAGTTTATCGGTTAGATTTGAAG
AAAGGTTGTGGCACAGTGGCAGTAAAGCAGCTTTGGAAAGGAAATGAGGTGAAAGTTTTG
ACAAGGGAAATGGACATTCTAGGAAAGATCAGGCATCGAAATATAGTTAAACTGTATGCC
AGTCTAATGAGAGAAGGTTCGAATATGCTGGTTTTCGAGTACTTGCCAAATGGTAATTTA
TTCGAGGCACTACACCGGGAAGTCAAGGCTGGGAAGACAGAATTAGATTGGTACCAGAGG
TATAAAATTGCAGTTGGAACTGCAAAGGGAATCGCTTATTTGCACCATGATTGTGTCCCG
CCTATTATTCATAGAGATATCAAGTCAACAAACATTCTACTTGATGAGGAGTATGAAGCA
AAAGTTTCTGATTTCGGGGTTGCAAAAGTTTCAGAAATTTCCTCTAGAGTCTCCGAGTTC
AGCTGCTTTGCAGGCACTCACGGCTATTTAGCTCCTGGTATGTTTCAAAGAGGATAA