Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059818
CDS Infomation

pacid=37477829 polypeptide=PGSC0003DMP400040238 locus=PGSC0003DMG400023264 ID=PGSC0003DMT400059818.v4.03 annot-version=v4.03
Sequence

ATGGCGGCATCTGCTTCTTCCGCTATCAATCTCTCCATCAAACCCTCACATACCTCTTTC
TCATGGAAAACTCACCTCTCTTCTACCTCCGCCTTAGCCGTTTCTCCTATCTCCGGTCAC
CGTCAGTATCCGCGTTTCGTTATCTACGCTGTGGGAGATAAACCGACGGTTCTCGTAGCT
GAAAAACTCGGTGAGGCAGGGGTCAATCTCCTTAAGGAATTTGCTGATGTTGATTGTTCT
TATAACCTGACTCCTGAGGAGCTCTGTAATAAGATCTCATTGTGTGATGCGTTGATTGTA
AGGAGTGGAACGAAGGTGAGCAGAGAGGTATTTGAGTCATCCGGTGGACGGCTCAAAGTT
GTTGGACGAGCTGGTGTTGGTATTGATAATGTCGATCTTGCAGCCGCGACTGAGCATGGA
TGCCTTGTTGTAAATGCCCCGACTGCTAACACTGTTGCTGCTGCTGAGCATGGAATCGCG
TTACTCACAGCTATGGCTCGAAATGTTGCTCAGGCCGATGCTTCCGTTAAAGCTGGGAAA
TGGCTGAGAAACAAATATGTTGGTGTCTCATTAGTTGGCAAAACACTTGCTGTGATGGGT
TTTGGAAAGGTTGGATCAGAAGTTGCCAGGCGAGCTAAGGGACTTGGCATGCATGTTATT
GCTCATGATCCATATGCCCCTGCTGATCGTGCACGTGCCATTGGGGTGGAGCTCGTTAGC
TTTGATAAAGCCATTGCTTCTGCAGATTTTATCTCACTTCACATGCCCCTTACTCCTGCA
ACTAACAAGGTCCTAAATGATGAAACTTTTGCAAAGATGAAAAAGGGAGTACGAATTGTA
AATGTTGCTCGTGGGGGAGTGATTGATGAAGATGCTTTGGTCAGGGCACTTGATGCAGGA
ATTGTGGCACAGGCGGCACTTGATGTTTTCACTGTGGAGCCACCAAAGGATAGTAAGTTG
GTTCAACATGAGAATGTAACTGCAACTCCTCATCTTGGTGCTAGTACTATGGAAGCTCAG
GAAGGGGTGGCCATTGAGATAGCAGAAGCTGTTGTTGGTGCTTTGAAGGGAGAGCTTGCA
GCTACTGCTGTCAATGCTCCAATGGTGCCTGCTGAGGTGCTTTCCGAGCTGAAGCCTTTT
GTTGCACTGGCTGAAAAACTTGGTAGACTTGCTGTCCAACTAGTGGCAGGTGGAAGTGGT
GTGAAATCAGTGAAAGTAACTTATGGTTCAGCTAGAGGACCTGATGATCTTGACACAAGA
TTGCTTCGGGCGATGATAACTAAGGGATTGATTGAGCCTATTTCCAGTTCTTTTGTGAAC
TTGGTAAATGCAGATTTCACAGCTAAACAGAGGGGACTGAGAATAGCTGAGCTAAGATCT
CTTCTAAATGGTTCTCCAGAAAGTCCACTCGAATTCATTCAGGTTCAGATTTCCAGTGTG
GAGTCCAAGTTTGCCAGTGCTCTTTCCGACTCTGGAGAGATTAGAGTGGAGGGCAGGGTT
AAAGATGGAATCCCCCATTTGACAAAAGTTGGATCTTTTGAAGTGGATGTGAGCTTGGAG
GGCAGCATCATTCTGTGCAGACAGGTTGATCAGCCCGGAATGATTGGAAAGGTGGGTAGC
ATCTTGTCTGAGGGGAATGTGAACGTAAGCTTCATGAGTGTTGGAAGGGTTGCTCCAAGG
AAGCATGCTGTTATGGCTATTGGGGTGGATGACCAACCAAGCAAGGAGATATTGAAGAGA
ATTGGGGAAATTCCTGCTGTTGAGGAGTTTGTTTACCTAAAGATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400040238
PEP Infomation

pacid=37477829 transcript=PGSC0003DMT400059818 locus=PGSC0003DMG400023264 ID=PGSC0003DMT400059818.v4.03 annot-version=v4.03
Sequence

MAASASSAINLSIKPSHTSFSWKTHLSSTSALAVSPISGHRQYPRFVIYAVGDKPTVLVA
EKLGEAGVNLLKEFADVDCSYNLTPEELCNKISLCDALIVRSGTKVSREVFESSGGRLKV
VGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMARNVAQADASVKAGK
WLRNKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVELVS
FDKAIASADFISLHMPLTPATNKVLNDETFAKMKKGVRIVNVARGGVIDEDALVRALDAG
IVAQAALDVFTVEPPKDSKLVQHENVTATPHLGASTMEAQEGVAIEIAEAVVGALKGELA
ATAVNAPMVPAEVLSELKPFVALAEKLGRLAVQLVAGGSGVKSVKVTYGSARGPDDLDTR
LLRAMITKGLIEPISSSFVNLVNADFTAKQRGLRIAELRSLLNGSPESPLEFIQVQISSV
ESKFASALSDSGEIRVEGRVKDGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGS
ILSEGNVNVSFMSVGRVAPRKHAVMAIGVDDQPSKEILKRIGEIPAVEEFVYLKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400059818
Transcript Infomation

pacid=37477829 locus=PGSC0003DMG400023264 ID=PGSC0003DMT400059818.v4.03 annot-version=v4.03
Sequence

ATGGCGGCATCTGCTTCTTCCGCTATCAATCTCTCCATCAAACCCTCACATACCTCTTTC
TCATGGAAAACTCACCTCTCTTCTACCTCCGCCTTAGCCGTTTCTCCTATCTCCGGTCAC
CGTCAGTATCCGCGTTTCGTTATCTACGCTGTGGGAGATAAACCGACGGTTCTCGTAGCT
GAAAAACTCGGTGAGGCAGGGGTCAATCTCCTTAAGGAATTTGCTGATGTTGATTGTTCT
TATAACCTGACTCCTGAGGAGCTCTGTAATAAGATCTCATTGTGTGATGCGTTGATTGTA
AGGAGTGGAACGAAGGTGAGCAGAGAGGTATTTGAGTCATCCGGTGGACGGCTCAAAGTT
GTTGGACGAGCTGGTGTTGGTATTGATAATGTCGATCTTGCAGCCGCGACTGAGCATGGA
TGCCTTGTTGTAAATGCCCCGACTGCTAACACTGTTGCTGCTGCTGAGCATGGAATCGCG
TTACTCACAGCTATGGCTCGAAATGTTGCTCAGGCCGATGCTTCCGTTAAAGCTGGGAAA
TGGCTGAGAAACAAATATGTTGGTGTCTCATTAGTTGGCAAAACACTTGCTGTGATGGGT
TTTGGAAAGGTTGGATCAGAAGTTGCCAGGCGAGCTAAGGGACTTGGCATGCATGTTATT
GCTCATGATCCATATGCCCCTGCTGATCGTGCACGTGCCATTGGGGTGGAGCTCGTTAGC
TTTGATAAAGCCATTGCTTCTGCAGATTTTATCTCACTTCACATGCCCCTTACTCCTGCA
ACTAACAAGGTCCTAAATGATGAAACTTTTGCAAAGATGAAAAAGGGAGTACGAATTGTA
AATGTTGCTCGTGGGGGAGTGATTGATGAAGATGCTTTGGTCAGGGCACTTGATGCAGGA
ATTGTGGCACAGGCGGCACTTGATGTTTTCACTGTGGAGCCACCAAAGGATAGTAAGTTG
GTTCAACATGAGAATGTAACTGCAACTCCTCATCTTGGTGCTAGTACTATGGAAGCTCAG
GAAGGGGTGGCCATTGAGATAGCAGAAGCTGTTGTTGGTGCTTTGAAGGGAGAGCTTGCA
GCTACTGCTGTCAATGCTCCAATGGTGCCTGCTGAGGTGCTTTCCGAGCTGAAGCCTTTT
GTTGCACTGGCTGAAAAACTTGGTAGACTTGCTGTCCAACTAGTGGCAGGTGGAAGTGGT
GTGAAATCAGTGAAAGTAACTTATGGTTCAGCTAGAGGACCTGATGATCTTGACACAAGA
TTGCTTCGGGCGATGATAACTAAGGGATTGATTGAGCCTATTTCCAGTTCTTTTGTGAAC
TTGGTAAATGCAGATTTCACAGCTAAACAGAGGGGACTGAGAATAGCTGAGCTAAGATCT
CTTCTAAATGGTTCTCCAGAAAGTCCACTCGAATTCATTCAGGTTCAGATTTCCAGTGTG
GAGTCCAAGTTTGCCAGTGCTCTTTCCGACTCTGGAGAGATTAGAGTGGAGGGCAGGGTT
AAAGATGGAATCCCCCATTTGACAAAAGTTGGATCTTTTGAAGTGGATGTGAGCTTGGAG
GGCAGCATCATTCTGTGCAGACAGGTTGATCAGCCCGGAATGATTGGAAAGGTGGGTAGC
ATCTTGTCTGAGGGGAATGTGAACGTAAGCTTCATGAGTGTTGGAAGGGTTGCTCCAAGG
AAGCATGCTGTTATGGCTATTGGGGTGGATGACCAACCAAGCAAGGAGATATTGAAGAGA
ATTGGGGAAATTCCTGCTGTTGAGGAGTTTGTTTACCTAAAGATATAG