Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059782
CDS Infomation

pacid=37452459 polypeptide=PGSC0003DMP400040215 locus=PGSC0003DMG400023248 ID=PGSC0003DMT400059782.v4.03 annot-version=v4.03
Sequence

ATGGAAGTTGACGACGATCTTCACACCTTACTCGACGAACAACGCCGTGAAATAGCAGCC
GCCGGTGACGGTGCCGTCGATGTCGACCTCCTCTTCGCTTTTCAACTCCAAATGCAAGAG
GCTATGAACGCTTCTACTTCAAAACCCACCATTAATGCAAACGTTATCGGAGGTAATAAC
AATGTCACTAATCTTTTCCCTGAAGAATTATCATACTACGAGCAACAAGTTATAGACCAA
CAAACAGCTCAAGTTGAGATGAGGAAAATCGAAGATGACCTCAATCGTCGAATCCACGAC
CAGGCTTTTGCACGGGAGATACTCAATGTCCCAGATGGTGAGTGGAAATTAACCGGTGAT
CATTTACATAGGCCTTATGGGGAGGGATCGTCGTCCGAAGGCGTGGATACACAAAATGGG
GAGTGTTTTAGGGTTTATGTGAAGGGTTTGATGGGAGAAGATGCTGATGAAGACATAGTT
GGGATTAATGTGGGGAGAAATATTGCTGGGATTGGAGTTGCTGTTTGTGATCCGAGTGGG
ATATTGGTGTTTGAAGTGAGTAAGGGTTTGGTTAAAGGCACTGAAGTATTGACGGATGAA
ATTGCAGAATTGAAAGCACTGATTGAAGGGCTGGATGTTGCTATAATGCTGGGTTTGAAA
AGGGTTAATGTTGTTTTGGATAGTCAAACAATCTTGCAATATGTTAGGGGCACGTTGCAT
CCAAGGAAGAGTAATATTGTTGCAATTGTTGAACAGGCAACTTCTTGCCTAAGAAAATTC
ACAGATTGTATACCATCTCTTGTGACACAGAACACCATCAACTTGGCAATTAAACTTGCT
ACCGATGCAATAGTCTCTCAGGTTAGAGGACCAGCAGAAAATAGCATTCGGAAGAGCATC
ACTGAGACTTGTACTATTTGTCTGCAAGATACTGATATAGATCATATGTTTCTAATTAAT
GGCTGCCTGCATTATTATTGCTATTCTTGTATGAATAAATATGTGGAAGCTAAGCTCCTT
CAAGGAATGCTACCTAAATGCCCTCATGATACATGCAAGTCTGAATTGAAATTAGATAGC
TGCAAAAAGTTCCTGATACCCAAGCTATATGATTTGATGAGTGAACGTGTGAAGGAAACT
ACCATTCCTATCACGGAAAAGATTTACTGCCCAAATCCTAAGTGTTCTACATTGATGTCA
AAAGCTGAGGTCCATATATCTATTCAAAATGTCACTGTGGGAAAACAACAAGCTGGGGCT
ACAATGTGCACGAAATGTCACCTTAATTTTTGTATCAACTGCAGAGTTCCTTGGCATAAA
AACATGACTTGCTTTGACTATAGAAGACTTAACCCTTACTTGTGTGTAGAAGATGCAAAT
CTCAAGTCTCTTGCCGCACAGAGTCGTTGGCGTCAGTGCGTAAAGTGCAACCACATGGTG
TCTCTTGGCGAAGGTTGCTATCATATTTACTGCAGATGTGGTCACGAGTTCTGTTACACA
TGCGGAGCTGAGTGGAAAAACAAGAAAGCAACATGTTCCTGCCCAGTATGGGATGAGCAA
AATATCATTTACGACAATAGACTCCAACCAAGGAGAGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040215
PEP Infomation

pacid=37452459 transcript=PGSC0003DMT400059782 locus=PGSC0003DMG400023248 ID=PGSC0003DMT400059782.v4.03 annot-version=v4.03
Sequence

MEVDDDLHTLLDEQRREIAAAGDGAVDVDLLFAFQLQMQEAMNASTSKPTINANVIGGNN
NVTNLFPEELSYYEQQVIDQQTAQVEMRKIEDDLNRRIHDQAFAREILNVPDGEWKLTGD
HLHRPYGEGSSSEGVDTQNGECFRVYVKGLMGEDADEDIVGINVGRNIAGIGVAVCDPSG
ILVFEVSKGLVKGTEVLTDEIAELKALIEGLDVAIMLGLKRVNVVLDSQTILQYVRGTLH
PRKSNIVAIVEQATSCLRKFTDCIPSLVTQNTINLAIKLATDAIVSQVRGPAENSIRKSI
TETCTICLQDTDIDHMFLINGCLHYYCYSCMNKYVEAKLLQGMLPKCPHDTCKSELKLDS
CKKFLIPKLYDLMSERVKETTIPITEKIYCPNPKCSTLMSKAEVHISIQNVTVGKQQAGA
TMCTKCHLNFCINCRVPWHKNMTCFDYRRLNPYLCVEDANLKSLAAQSRWRQCVKCNHMV
SLGEGCYHIYCRCGHEFCYTCGAEWKNKKATCSCPVWDEQNIIYDNRLQPRRG*

Transcript Sequence

Transcript ID

PGSC0003DMT400059782
Transcript Infomation

pacid=37452459 locus=PGSC0003DMG400023248 ID=PGSC0003DMT400059782.v4.03 annot-version=v4.03
Sequence

ATGGAAGTTGACGACGATCTTCACACCTTACTCGACGAACAACGCCGTGAAATAGCAGCC
GCCGGTGACGGTGCCGTCGATGTCGACCTCCTCTTCGCTTTTCAACTCCAAATGCAAGAG
GCTATGAACGCTTCTACTTCAAAACCCACCATTAATGCAAACGTTATCGGAGGTAATAAC
AATGTCACTAATCTTTTCCCTGAAGAATTATCATACTACGAGCAACAAGTTATAGACCAA
CAAACAGCTCAAGTTGAGATGAGGAAAATCGAAGATGACCTCAATCGTCGAATCCACGAC
CAGGCTTTTGCACGGGAGATACTCAATGTCCCAGATGGTGAGTGGAAATTAACCGGTGAT
CATTTACATAGGCCTTATGGGGAGGGATCGTCGTCCGAAGGCGTGGATACACAAAATGGG
GAGTGTTTTAGGGTTTATGTGAAGGGTTTGATGGGAGAAGATGCTGATGAAGACATAGTT
GGGATTAATGTGGGGAGAAATATTGCTGGGATTGGAGTTGCTGTTTGTGATCCGAGTGGG
ATATTGGTGTTTGAAGTGAGTAAGGGTTTGGTTAAAGGCACTGAAGTATTGACGGATGAA
ATTGCAGAATTGAAAGCACTGATTGAAGGGCTGGATGTTGCTATAATGCTGGGTTTGAAA
AGGGTTAATGTTGTTTTGGATAGTCAAACAATCTTGCAATATGTTAGGGGCACGTTGCAT
CCAAGGAAGAGTAATATTGTTGCAATTGTTGAACAGGCAACTTCTTGCCTAAGAAAATTC
ACAGATTGTATACCATCTCTTGTGACACAGAACACCATCAACTTGGCAATTAAACTTGCT
ACCGATGCAATAGTCTCTCAGGTTAGAGGACCAGCAGAAAATAGCATTCGGAAGAGCATC
ACTGAGACTTGTACTATTTGTCTGCAAGATACTGATATAGATCATATGTTTCTAATTAAT
GGCTGCCTGCATTATTATTGCTATTCTTGTATGAATAAATATGTGGAAGCTAAGCTCCTT
CAAGGAATGCTACCTAAATGCCCTCATGATACATGCAAGTCTGAATTGAAATTAGATAGC
TGCAAAAAGTTCCTGATACCCAAGCTATATGATTTGATGAGTGAACGTGTGAAGGAAACT
ACCATTCCTATCACGGAAAAGATTTACTGCCCAAATCCTAAGTGTTCTACATTGATGTCA
AAAGCTGAGGTCCATATATCTATTCAAAATGTCACTGTGGGAAAACAACAAGCTGGGGCT
ACAATGTGCACGAAATGTCACCTTAATTTTTGTATCAACTGCAGAGTTCCTTGGCATAAA
AACATGACTTGCTTTGACTATAGAAGACTTAACCCTTACTTGTGTGTAGAAGATGCAAAT
CTCAAGTCTCTTGCCGCACAGAGTCGTTGGCGTCAGTGCGTAAAGTGCAACCACATGGTG
TCTCTTGGCGAAGGTTGCTATCATATTTACTGCAGATGTGGTCACGAGTTCTGTTACACA
TGCGGAGCTGAGTGGAAAAACAAGAAAGCAACATGTTCCTGCCCAGTATGGGATGAGCAA
AATATCATTTACGACAATAGACTCCAACCAAGGAGAGGCTGA