Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059678
CDS Infomation

pacid=37430328 polypeptide=PGSC0003DMP400040156 locus=PGSC0003DMG400023198 ID=PGSC0003DMT400059678.v4.03 annot-version=v4.03
Sequence

ATGGGATCCTCTGCAATGTCTGTTGACGAGATTGTGGAAGAGATGATGAGGCTTAACAAA
TCTCTACCAATAAGGCCAGGGATAGATGAAGTGGAAGCAGCAAAAGTTTTAATTATGAAT
ATGGAGAAGGAGGAACAAATGAAGTTAGAGACAATTGCGCGGCAAAACAAAAGAAAAGAT
GTACCAGAAGAGGTATTCAAAATATTGCAAGAGATGCAGAGGAATTTAGTTTATTTTCAG
AGTAAAGAACAGAAGAGAGAGGCATTAAAATTGTTAGATCTCGAAAATGTTCATTACCTG
TTCGATGAATTGATTCAAAGAGCTTCGAAATGCTTGTCATCTAATCCTCAAGCTAATAAT
ACTTCTTCAGCTTCTTCAAGGAATTCCAGCAATTTGTCTTTGGCGAATTCATCTTCCTTC
AACGGTAGCAGTTTCAATTCTCCGGCAACTACTACGACTATGTCTTCGTCGAGCTTTTAT
AGTGAGAAAGAGCCTGTTAAAGTGTCTGAACTTGTTACAAGAGACGACAGTTACTTGAAG
AAGCCGACAACTGCGTTTCAAATGGATGGAATCGGTGTTGGGCTTCGATCTGGGAACGCT
TCTTCTGCTCCCCAGATTGTCGATACCACTTTGAAGCGTAGTACTGGTCAAAATGGTGAA
AAAATGAGCTTGATAAAGCTTGCTAGTTTGATAGAAGTTTCAGCCAAAAAAGGAACCAAG
GAGCTAATTCTTCGAAGAAAACTGTCAGACCAATTAGAATGGATTCCAGATTCACTTGGG
AAGCTATCAAATTTGGTGACTTTGGATTTGTCTGAGAATCGAATTGCTGTGCTGCCAACT
ACCAGCGGGGGTCTTTCATCGTTGCAAAAACTAGATTTGCATGGAAATAGAATTGTTGAA
CTTCCTGATTCAATAGGAGATCTGCTTAACTTGGTCTATCTTGATCTAAATGGCAATAAC
CTGAAGACGTTGCCTTTGACTTTAGCGAGGTTAACTCACCTTGAGGAAGTCGATCTAAGC
TCTAACATGCTATCTGTACTCCCCGAGGCAGTGGGATCCCTTGTCAGTCTCAAAAAACTG
ATCGTTGAGACTAATGACCTAGAGGAACTTCCTCACACTATTGGTCAATGTACTTCGCTG
AAAGAGCTCCGTGCTGACTATAACCGTCTTAAAGCTCTTCCTGAAGCCTTGGGGCGAATG
GGTTCTTTGGAGATTCTATCCGTGCGGTACAATAACATCAGGCAATTGCCTACAACTATG
GCATCCTTAACAAGTTTGAAAGAGCTCAATGTTAGTTTCAATGAGCTTGAGTCAGTGCCT
GAGAGCTTGTGCTTTGCCACTACACTCGTAAAACTGAACATTAGCAACAACTTTGCGGAC
CTGCAATCACTCCCTAGATCCATAGGAAACCTTGAGATGCTTGAGGAGCTGGATATGAGT
AACAACCAGATACGAATTCTACCAGATTCATTTAGGATGCTTTCGCATTTGCGTGTACTA
AAGACAGAAGGAAATCCTCTTGAAGTGCCACCAGGAAACATTATCGAGATGGGAGCACAG
GCTGTTGTGCAGCATATGGCTGATCTTGTTGAAAAGAGGGATGCGAAGCCACAGCCAGTT
AAGCAGAAGAAATCATGGGCTCAGATATGCTGCTTTTCAAGATCCAACAAACGTAAGCGC
AATGGTATAGACTATGTCGTCCAAGCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040156
PEP Infomation

pacid=37430328 transcript=PGSC0003DMT400059678 locus=PGSC0003DMG400023198 ID=PGSC0003DMT400059678.v4.03 annot-version=v4.03
Sequence

MGSSAMSVDEIVEEMMRLNKSLPIRPGIDEVEAAKVLIMNMEKEEQMKLETIARQNKRKD
VPEEVFKILQEMQRNLVYFQSKEQKREALKLLDLENVHYLFDELIQRASKCLSSNPQANN
TSSASSRNSSNLSLANSSSFNGSSFNSPATTTTMSSSSFYSEKEPVKVSELVTRDDSYLK
KPTTAFQMDGIGVGLRSGNASSAPQIVDTTLKRSTGQNGEKMSLIKLASLIEVSAKKGTK
ELILRRKLSDQLEWIPDSLGKLSNLVTLDLSENRIAVLPTTSGGLSSLQKLDLHGNRIVE
LPDSIGDLLNLVYLDLNGNNLKTLPLTLARLTHLEEVDLSSNMLSVLPEAVGSLVSLKKL
IVETNDLEELPHTIGQCTSLKELRADYNRLKALPEALGRMGSLEILSVRYNNIRQLPTTM
ASLTSLKELNVSFNELESVPESLCFATTLVKLNISNNFADLQSLPRSIGNLEMLEELDMS
NNQIRILPDSFRMLSHLRVLKTEGNPLEVPPGNIIEMGAQAVVQHMADLVEKRDAKPQPV
KQKKSWAQICCFSRSNKRKRNGIDYVVQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400059678
Transcript Infomation

pacid=37430328 locus=PGSC0003DMG400023198 ID=PGSC0003DMT400059678.v4.03 annot-version=v4.03
Sequence

ATGGGATCCTCTGCAATGTCTGTTGACGAGATTGTGGAAGAGATGATGAGGCTTAACAAA
TCTCTACCAATAAGGCCAGGGATAGATGAAGTGGAAGCAGCAAAAGTTTTAATTATGAAT
ATGGAGAAGGAGGAACAAATGAAGTTAGAGACAATTGCGCGGCAAAACAAAAGAAAAGAT
GTACCAGAAGAGGTATTCAAAATATTGCAAGAGATGCAGAGGAATTTAGTTTATTTTCAG
AGTAAAGAACAGAAGAGAGAGGCATTAAAATTGTTAGATCTCGAAAATGTTCATTACCTG
TTCGATGAATTGATTCAAAGAGCTTCGAAATGCTTGTCATCTAATCCTCAAGCTAATAAT
ACTTCTTCAGCTTCTTCAAGGAATTCCAGCAATTTGTCTTTGGCGAATTCATCTTCCTTC
AACGGTAGCAGTTTCAATTCTCCGGCAACTACTACGACTATGTCTTCGTCGAGCTTTTAT
AGTGAGAAAGAGCCTGTTAAAGTGTCTGAACTTGTTACAAGAGACGACAGTTACTTGAAG
AAGCCGACAACTGCGTTTCAAATGGATGGAATCGGTGTTGGGCTTCGATCTGGGAACGCT
TCTTCTGCTCCCCAGATTGTCGATACCACTTTGAAGCGTAGTACTGGTCAAAATGGTGAA
AAAATGAGCTTGATAAAGCTTGCTAGTTTGATAGAAGTTTCAGCCAAAAAAGGAACCAAG
GAGCTAATTCTTCGAAGAAAACTGTCAGACCAATTAGAATGGATTCCAGATTCACTTGGG
AAGCTATCAAATTTGGTGACTTTGGATTTGTCTGAGAATCGAATTGCTGTGCTGCCAACT
ACCAGCGGGGGTCTTTCATCGTTGCAAAAACTAGATTTGCATGGAAATAGAATTGTTGAA
CTTCCTGATTCAATAGGAGATCTGCTTAACTTGGTCTATCTTGATCTAAATGGCAATAAC
CTGAAGACGTTGCCTTTGACTTTAGCGAGGTTAACTCACCTTGAGGAAGTCGATCTAAGC
TCTAACATGCTATCTGTACTCCCCGAGGCAGTGGGATCCCTTGTCAGTCTCAAAAAACTG
ATCGTTGAGACTAATGACCTAGAGGAACTTCCTCACACTATTGGTCAATGTACTTCGCTG
AAAGAGCTCCGTGCTGACTATAACCGTCTTAAAGCTCTTCCTGAAGCCTTGGGGCGAATG
GGTTCTTTGGAGATTCTATCCGTGCGGTACAATAACATCAGGCAATTGCCTACAACTATG
GCATCCTTAACAAGTTTGAAAGAGCTCAATGTTAGTTTCAATGAGCTTGAGTCAGTGCCT
GAGAGCTTGTGCTTTGCCACTACACTCGTAAAACTGAACATTAGCAACAACTTTGCGGAC
CTGCAATCACTCCCTAGATCCATAGGAAACCTTGAGATGCTTGAGGAGCTGGATATGAGT
AACAACCAGATACGAATTCTACCAGATTCATTTAGGATGCTTTCGCATTTGCGTGTACTA
AAGACAGAAGGAAATCCTCTTGAAGTGCCACCAGGAAACATTATCGAGATGGGAGCACAG
GCTGTTGTGCAGCATATGGCTGATCTTGTTGAAAAGAGGGATGCGAAGCCACAGCCAGTT
AAGCAGAAGAAATCATGGGCTCAGATATGCTGCTTTTCAAGATCCAACAAACGTAAGCGC
AATGGTATAGACTATGTCGTCCAAGCGTGA