Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059655
CDS Infomation

pacid=37463524 polypeptide=PGSC0003DMP400040142 locus=PGSC0003DMG402023186 ID=PGSC0003DMT400059655.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTCCTCACGTATTTATTTTCCCGTTGCCTCTTCAAGGTACAGTAAATTGCATG
CTTAAACTGGCTGAACTCTTATGCCTTCACCAAGAAATTCATATCACTTTCATCAACACT
GAATATATCCATCAACGCTTGATGAATTATACGGACGTTCTAGTCCGTTTTGAGAAATAT
CCAAACTTCAAATTCGTGACAGTTCCAGATGGACTTCCAGAAGATAATCCAAGAAATGGA
GACCAAATAGGGAAGATTATTGAAGGTGTAGAGAAAGTGAGTAGCCCACTTTTCAGAGAG
ATGGTGATGATGACTACTACTAATTATTGTACTCCAACTTGTCTCATAGTTGATGGTATT
TTTTCATTTGCTGTTGATATTGCTAAAGAGGCTAAAATCCCACTTCTTTATTTTGATACT
ATAAGTCCTTGTTCTCTCTGGACTTATTTGGCTGTTCCAAAACTCATTGAAGATGGAGAA
ATTCCTTTCAAAGGAAATGACTTGGATGCATTAGTAAATGGTGTGGCAGGAATGGAAGGT
GTGATGAGGCGCCGAGATCTTCCTAGTTTCTGCCGAACACCTGACCTTGATATCCCTATT
ATCAAACTTGTAATCAAGCAGGGGAAACATATTGTCCAAGCCCAAGGTCTAATATTCAAC
ACATTTGAAGACCTTGAAGGGCCTATTCTCTCACAATTTCGAGCTCTATGTCCAAACATC
TATGCCATTGGGCCTCTTCACACTCAAATGAAGGCAAACCTATCTTCTCAATATTTGCCA
AACACACCAACATCCAACAGCATATGGAAAGAGGATATGAGTTGTATAGATTGGCTCAAC
AAACAGCCCAATAAATCAGTTCTATTTGTCAGCATTGGAAGCCTTGCCACAATGAGCAAG
GCCCAATTCTTGGAATTTTGGTATGGTTTGGTGAATAGTAAGACTAGGTTCTTGTGGGTC
CAGAGGCCCGGTTCAATTATTGGACTTGAAGACGACAACAATAATGTTCCCATGGAATTG
GTTAAAAGTACAAAGGAGAGGGGGTGTATTATTAGTTGGGCTCCACAAGAAAAAGTGCTA
GCTCACCCATCAATTGGTGGGTTTTTAACGCACAGTGGGTGGAATTCGACTTTGGAAAGT
ATAGTAGAAGGAGTGCCAATGATTTGTTGGCCCTATTTTGTTGATCAACAAGTAAATAGT
AGGTATGTTGGGGAAGTGTGGAAGCTTGGAATAGACATGAAAGATGTATGTGATAGAGCC
ACAATTGAGAGGATGGTGATACAAGTGATGGATGTGGAGAAAATTGAATTTTTGGAAAAG
GCAAAACATATGAGCGATTTGGCAATAGCAAGTGTTGGCGAAGGTGGCTCTTCATACCAA
GATTTGGACCGTTTAATTGAGGATATTAGGCTGATGAGGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400040142
PEP Infomation

pacid=37463524 transcript=PGSC0003DMT400059655 locus=PGSC0003DMG402023186 ID=PGSC0003DMT400059655.v4.03 annot-version=v4.03
Sequence

MAVPHVFIFPLPLQGTVNCMLKLAELLCLHQEIHITFINTEYIHQRLMNYTDVLVRFEKY
PNFKFVTVPDGLPEDNPRNGDQIGKIIEGVEKVSSPLFREMVMMTTTNYCTPTCLIVDGI
FSFAVDIAKEAKIPLLYFDTISPCSLWTYLAVPKLIEDGEIPFKGNDLDALVNGVAGMEG
VMRRRDLPSFCRTPDLDIPIIKLVIKQGKHIVQAQGLIFNTFEDLEGPILSQFRALCPNI
YAIGPLHTQMKANLSSQYLPNTPTSNSIWKEDMSCIDWLNKQPNKSVLFVSIGSLATMSK
AQFLEFWYGLVNSKTRFLWVQRPGSIIGLEDDNNNVPMELVKSTKERGCIISWAPQEKVL
AHPSIGGFLTHSGWNSTLESIVEGVPMICWPYFVDQQVNSRYVGEVWKLGIDMKDVCDRA
TIERMVIQVMDVEKIEFLEKAKHMSDLAIASVGEGGSSYQDLDRLIEDIRLMRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400059655
Transcript Infomation

pacid=37463524 locus=PGSC0003DMG402023186 ID=PGSC0003DMT400059655.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTCCTCACGTATTTATTTTCCCGTTGCCTCTTCAAGGTACAGTAAATTGCATG
CTTAAACTGGCTGAACTCTTATGCCTTCACCAAGAAATTCATATCACTTTCATCAACACT
GAATATATCCATCAACGCTTGATGAATTATACGGACGTTCTAGTCCGTTTTGAGAAATAT
CCAAACTTCAAATTCGTGACAGTTCCAGATGGACTTCCAGAAGATAATCCAAGAAATGGA
GACCAAATAGGGAAGATTATTGAAGGTGTAGAGAAAGTGAGTAGCCCACTTTTCAGAGAG
ATGGTGATGATGACTACTACTAATTATTGTACTCCAACTTGTCTCATAGTTGATGGTATT
TTTTCATTTGCTGTTGATATTGCTAAAGAGGCTAAAATCCCACTTCTTTATTTTGATACT
ATAAGTCCTTGTTCTCTCTGGACTTATTTGGCTGTTCCAAAACTCATTGAAGATGGAGAA
ATTCCTTTCAAAGGAAATGACTTGGATGCATTAGTAAATGGTGTGGCAGGAATGGAAGGT
GTGATGAGGCGCCGAGATCTTCCTAGTTTCTGCCGAACACCTGACCTTGATATCCCTATT
ATCAAACTTGTAATCAAGCAGGGGAAACATATTGTCCAAGCCCAAGGTCTAATATTCAAC
ACATTTGAAGACCTTGAAGGGCCTATTCTCTCACAATTTCGAGCTCTATGTCCAAACATC
TATGCCATTGGGCCTCTTCACACTCAAATGAAGGCAAACCTATCTTCTCAATATTTGCCA
AACACACCAACATCCAACAGCATATGGAAAGAGGATATGAGTTGTATAGATTGGCTCAAC
AAACAGCCCAATAAATCAGTTCTATTTGTCAGCATTGGAAGCCTTGCCACAATGAGCAAG
GCCCAATTCTTGGAATTTTGGTATGGTTTGGTGAATAGTAAGACTAGGTTCTTGTGGGTC
CAGAGGCCCGGTTCAATTATTGGACTTGAAGACGACAACAATAATGTTCCCATGGAATTG
GTTAAAAGTACAAAGGAGAGGGGGTGTATTATTAGTTGGGCTCCACAAGAAAAAGTGCTA
GCTCACCCATCAATTGGTGGGTTTTTAACGCACAGTGGGTGGAATTCGACTTTGGAAAGT
ATAGTAGAAGGAGTGCCAATGATTTGTTGGCCCTATTTTGTTGATCAACAAGTAAATAGT
AGGTATGTTGGGGAAGTGTGGAAGCTTGGAATAGACATGAAAGATGTATGTGATAGAGCC
ACAATTGAGAGGATGGTGATACAAGTGATGGATGTGGAGAAAATTGAATTTTTGGAAAAG
GCAAAACATATGAGCGATTTGGCAATAGCAAGTGTTGGCGAAGGTGGCTCTTCATACCAA
GATTTGGACCGTTTAATTGAGGATATTAGGCTGATGAGGATATAA