Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059643
CDS Infomation

pacid=37426380 polypeptide=PGSC0003DMP400040131 locus=PGSC0003DMG400023179 ID=PGSC0003DMT400059643.v4.03 annot-version=v4.03
Sequence

ATGTCGACTACATTGCCTCAAGAAGCTCGACGTTTTGGAGATCTGAGGGGGGTGCAATGG
CGTATTGATTTGGGTATTTTGCCTTCTTCCCTCGATTCATCCATCCATGATCTTCGCCGC
GTCACAGCCGATTGCCGTAGGAGGTATGCTTCTTTGAGGCGGCAGCTTCTAATTGATCCA
CATGTTCCGAAAGATGGAAGTAATTCTCCTGATTTTGTCATGGACAATCCACTCTCACAA
AATCCAGATAGCATGTGGAGTCGCTTCTTCAGGAATGCTGAATTGGAGAGAATGGTTGAT
CAGGATCTCTCTCGTCTATATCCTGAGCATGGTAGCTACTTTCAAACACCTGGTTGTCAA
GCCACATTGAGAAGAATATTGTTGCTTTGGTGCCTTGGACATCCAGAGTTCGGCTACAGG
CAAGGGATGCATGAACTGTTGGCCCCACTTCTCTATGTTCTTCAAGCCGATATTGAGCAG
CTTACTGAAGTGAGGAATCTTTATGAAGATCATTTTGCTGACAAATTTGATGGTTTTTCA
TTTCATGAAAATGATTTTACATATAAATTTGATTTCCGAAAATTTTCAGAATCTGAGGAA
GAAGAAAATAGATCTGAAAGCAGTCCACTGAAAATTACTAGTTTAACTGAACTAGATCCC
AAGATACAATGCATTGTTTTGCTGAGTGATGCTTACGGTACTGAAGGTGAGCTTGGTATT
CTTTTGTCTGAGAAGTTTATGGAACATGATGCATACTGTATGTTTGATGCTTTGATGAAT
GGGGCTAGCGGTGCAGTTGCTATGGCAGAGTTTTTCTCCCATTCACCATATGGTACTCCT
CATGCTGGCCTTCCCCCTGTCATTGAAGCTTCAGCAGCACTTTACCATTTGCTTTCACTT
ATTGATTCCTCTCTCCACAGCCACCTTGTCGAGCTAGGGGTTGAACCACAGTACTTTGCA
CTTCGTTGGTTACGAGTACTATTTGGGCGTGAATTTGCACTTGAAGACCTATTGATAATC
TGGGATGAAATATTTGCATGTGAAAACAAGAAGTTGGTGAAATCTTCTGAAATTGCTGCT
GAGTCCAGCTGCAGTGTCTTGAATTCAAACAGAGGAGCATTCATCTCAGCTTATGCAGTT
ACTATGATACTTCACTTGAGACCTTCACTACTTGCCACTGAAAATGCTACTGTGTGCCTT
CAAAGATTGCTAAATTTTCCAGATGACGCAATTGTAGAAAAACTGATAGAAAAGGCAAAA
TCCATGCAGTCTTTGGCAATGGAGGCCAACAATTCAACTCCCTTAGTTGGCCAAGGTGGA
GACTATGGTAGAAGTAAGTCAAAAGTTGTGAGAGGTCATAGCCATTCAATTGATTTAAGC
TCCCAAAGGACTCCTCTATATTTGGTACCAGAAAGCTATTGGGAAGAAAAGTGGAGAGTT
GTACACAAAGAAGAAGAGCACAAGCAAAATTGCATACAGAAACAAACTTCAAAGCAAAGA
AAAGGTTGGTCTGAGAAATTCAGATTGCATCTTAGTAGAACCGAGTCTGTTCCATCGCCA
TCTAAGGTTAATAATGGAAGAAAAGGTCCCAAGTTATTGGTTAGGAAAAATTTATTGAAA
GATTTGCCTCAGCAACTTTGTTTGGATGAAAATGTAAATAATCATATTGGTGATGATAAT
GTACCGGAGAAAAATCCAGTTGAGGTAAATGTACAAGATGGTGACAATAGAGATGATTTG
ACTTGCGCACCTGAGAAAACGTGGTCAAGCAGAAATGCTGCTAGTGTACAGAATGCTTCT
ATTTTCTCAGATCCCCCAAGTCCTATACATGCTGGTGATCCTGAAAATAGATCCGAGAGT
AGTGTTGCATCAAACTCATATGCAGATGAAACTAATGTTGATGCCAATAGAGGTGAGGTG
TCTGGAACCAATCTGGGAAACTCACCTCCCCAAATTTTGGATCCACCACAGCAGGCCTGT
TTAAAATCTGAACCTAACGATGCCTCTGGAGGTAAATGTACAACAGGCTTGAAGGAGCGG
AGATCTGTTTCTGGTAAATTTCAGAGGTTATGGAAATTTGGACGAAATGCTGATGAGGAA
ACGTCTGAAAGAAGTGGTCTGTGTGATTCCATAAAAGCTTGCAATGGTGGGAATAATCTG
ACCACTCCAGCTGATTCTTCTACAGCTGATGCATCTCAAAACTATAAAGTAATCAAAGAG
AAAACTGTAGACCAGAATCTTATAGCTACATTGAGAAATCTTGGACAGTCTATGCACGAG
AATATCCAGGTGATCGAGTCTGAGTTCCTGCAAGATCAGGGTCATGTTGGGACCTTCAAA
CACGTCTCTAAGAATGATTTGGCTGGTCAAAGTCAAGGAACAGCCATGACAGCTCTTGAG
GAGCTTCGGAAAATCAGCAACCTCTTATCAGAGATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400040131
PEP Infomation

pacid=37426380 transcript=PGSC0003DMT400059643 locus=PGSC0003DMG400023179 ID=PGSC0003DMT400059643.v4.03 annot-version=v4.03
Sequence

MSTTLPQEARRFGDLRGVQWRIDLGILPSSLDSSIHDLRRVTADCRRRYASLRRQLLIDP
HVPKDGSNSPDFVMDNPLSQNPDSMWSRFFRNAELERMVDQDLSRLYPEHGSYFQTPGCQ
ATLRRILLLWCLGHPEFGYRQGMHELLAPLLYVLQADIEQLTEVRNLYEDHFADKFDGFS
FHENDFTYKFDFRKFSESEEEENRSESSPLKITSLTELDPKIQCIVLLSDAYGTEGELGI
LLSEKFMEHDAYCMFDALMNGASGAVAMAEFFSHSPYGTPHAGLPPVIEASAALYHLLSL
IDSSLHSHLVELGVEPQYFALRWLRVLFGREFALEDLLIIWDEIFACENKKLVKSSEIAA
ESSCSVLNSNRGAFISAYAVTMILHLRPSLLATENATVCLQRLLNFPDDAIVEKLIEKAK
SMQSLAMEANNSTPLVGQGGDYGRSKSKVVRGHSHSIDLSSQRTPLYLVPESYWEEKWRV
VHKEEEHKQNCIQKQTSKQRKGWSEKFRLHLSRTESVPSPSKVNNGRKGPKLLVRKNLLK
DLPQQLCLDENVNNHIGDDNVPEKNPVEVNVQDGDNRDDLTCAPEKTWSSRNAASVQNAS
IFSDPPSPIHAGDPENRSESSVASNSYADETNVDANRGEVSGTNLGNSPPQILDPPQQAC
LKSEPNDASGGKCTTGLKERRSVSGKFQRLWKFGRNADEETSERSGLCDSIKACNGGNNL
TTPADSSTADASQNYKVIKEKTVDQNLIATLRNLGQSMHENIQVIESEFLQDQGHVGTFK
HVSKNDLAGQSQGTAMTALEELRKISNLLSEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400059643
Transcript Infomation

pacid=37426380 locus=PGSC0003DMG400023179 ID=PGSC0003DMT400059643.v4.03 annot-version=v4.03
Sequence

ATGTCGACTACATTGCCTCAAGAAGCTCGACGTTTTGGAGATCTGAGGGGGGTGCAATGG
CGTATTGATTTGGGTATTTTGCCTTCTTCCCTCGATTCATCCATCCATGATCTTCGCCGC
GTCACAGCCGATTGCCGTAGGAGGTATGCTTCTTTGAGGCGGCAGCTTCTAATTGATCCA
CATGTTCCGAAAGATGGAAGTAATTCTCCTGATTTTGTCATGGACAATCCACTCTCACAA
AATCCAGATAGCATGTGGAGTCGCTTCTTCAGGAATGCTGAATTGGAGAGAATGGTTGAT
CAGGATCTCTCTCGTCTATATCCTGAGCATGGTAGCTACTTTCAAACACCTGGTTGTCAA
GCCACATTGAGAAGAATATTGTTGCTTTGGTGCCTTGGACATCCAGAGTTCGGCTACAGG
CAAGGGATGCATGAACTGTTGGCCCCACTTCTCTATGTTCTTCAAGCCGATATTGAGCAG
CTTACTGAAGTGAGGAATCTTTATGAAGATCATTTTGCTGACAAATTTGATGGTTTTTCA
TTTCATGAAAATGATTTTACATATAAATTTGATTTCCGAAAATTTTCAGAATCTGAGGAA
GAAGAAAATAGATCTGAAAGCAGTCCACTGAAAATTACTAGTTTAACTGAACTAGATCCC
AAGATACAATGCATTGTTTTGCTGAGTGATGCTTACGGTACTGAAGGTGAGCTTGGTATT
CTTTTGTCTGAGAAGTTTATGGAACATGATGCATACTGTATGTTTGATGCTTTGATGAAT
GGGGCTAGCGGTGCAGTTGCTATGGCAGAGTTTTTCTCCCATTCACCATATGGTACTCCT
CATGCTGGCCTTCCCCCTGTCATTGAAGCTTCAGCAGCACTTTACCATTTGCTTTCACTT
ATTGATTCCTCTCTCCACAGCCACCTTGTCGAGCTAGGGGTTGAACCACAGTACTTTGCA
CTTCGTTGGTTACGAGTACTATTTGGGCGTGAATTTGCACTTGAAGACCTATTGATAATC
TGGGATGAAATATTTGCATGTGAAAACAAGAAGTTGGTGAAATCTTCTGAAATTGCTGCT
GAGTCCAGCTGCAGTGTCTTGAATTCAAACAGAGGAGCATTCATCTCAGCTTATGCAGTT
ACTATGATACTTCACTTGAGACCTTCACTACTTGCCACTGAAAATGCTACTGTGTGCCTT
CAAAGATTGCTAAATTTTCCAGATGACGCAATTGTAGAAAAACTGATAGAAAAGGCAAAA
TCCATGCAGTCTTTGGCAATGGAGGCCAACAATTCAACTCCCTTAGTTGGCCAAGGTGGA
GACTATGGTAGAAGTAAGTCAAAAGTTGTGAGAGGTCATAGCCATTCAATTGATTTAAGC
TCCCAAAGGACTCCTCTATATTTGGTACCAGAAAGCTATTGGGAAGAAAAGTGGAGAGTT
GTACACAAAGAAGAAGAGCACAAGCAAAATTGCATACAGAAACAAACTTCAAAGCAAAGA
AAAGGTTGGTCTGAGAAATTCAGATTGCATCTTAGTAGAACCGAGTCTGTTCCATCGCCA
TCTAAGGTTAATAATGGAAGAAAAGGTCCCAAGTTATTGGTTAGGAAAAATTTATTGAAA
GATTTGCCTCAGCAACTTTGTTTGGATGAAAATGTAAATAATCATATTGGTGATGATAAT
GTACCGGAGAAAAATCCAGTTGAGGTAAATGTACAAGATGGTGACAATAGAGATGATTTG
ACTTGCGCACCTGAGAAAACGTGGTCAAGCAGAAATGCTGCTAGTGTACAGAATGCTTCT
ATTTTCTCAGATCCCCCAAGTCCTATACATGCTGGTGATCCTGAAAATAGATCCGAGAGT
AGTGTTGCATCAAACTCATATGCAGATGAAACTAATGTTGATGCCAATAGAGGTGAGGTG
TCTGGAACCAATCTGGGAAACTCACCTCCCCAAATTTTGGATCCACCACAGCAGGCCTGT
TTAAAATCTGAACCTAACGATGCCTCTGGAGGTAAATGTACAACAGGCTTGAAGGAGCGG
AGATCTGTTTCTGGTAAATTTCAGAGGTTATGGAAATTTGGACGAAATGCTGATGAGGAA
ACGTCTGAAAGAAGTGGTCTGTGTGATTCCATAAAAGCTTGCAATGGTGGGAATAATCTG
ACCACTCCAGCTGATTCTTCTACAGCTGATGCATCTCAAAACTATAAAGTAATCAAAGAG
AAAACTGTAGACCAGAATCTTATAGCTACATTGAGAAATCTTGGACAGTCTATGCACGAG
AATATCCAGGTGATCGAGTCTGAGTTCCTGCAAGATCAGGGTCATGTTGGGACCTTCAAA
CACGTCTCTAAGAATGATTTGGCTGGTCAAAGTCAAGGAACAGCCATGACAGCTCTTGAG
GAGCTTCGGAAAATCAGCAACCTCTTATCAGAGATGTAG