Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059600
CDS Infomation

pacid=37425601 polypeptide=PGSC0003DMP400040106 locus=PGSC0003DMG400023159 ID=PGSC0003DMT400059600.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGGGGGTGATGGTACATCAAGACAGCTTGATCAGACACCTACTTGGGCAGTT
GCTGGTGTTTGTGCAGTCATTATTCTCATTTCTATTGCTTTGGAGAAGATTATCCATAAA
CTTGGCACTTGGCTCACAGAGAGGCATAAGAAAGCTCTATTTGAGGCTTTGGAAAAGGTT
AAGGCTGAGTTGATGGTTCTTGGTTTTATCTCATTAACCCTTGTGTTCAGCCAGTATTAT
ATTGCTGGAATCTGTATCCCCACAAGTGTGGCTAACACTCTGCTCCCTTGCCCTGCTGTT
AACAAAGAGGATAAAACGGAGGAACATCGCCGGAGGCTTTTATGGCATGAGCGCAGGATT
TTGGCTGGTGCAGAGCCTAAATGTGATGATGGACGAGTCTCTCTCATTTCTATCGACGCA
CTGCATCAAATACACATCCTTATCTTCTTTTTGGCGGTCTTTCATGTGGTATACAGTGCT
ATCACTATGTGGCTGGGAAAACTCAAGATTCGTGGCTGGAAATGCTGGGAACTAGAGACC
TCAACCCATAACTATGAGTTTTCAAATGATCCTTCAAGATTTAGGCTTACTCATGAGACA
TCATTTGTCAGAGCACATACTAGTTTCTGGACCAATATTCCAATCTTCTTTTACATTGGA
TGTTTCTTGAGACAATTTTTCAGGTCCGTGAATAAGTCAGACTACTTGACCCTCCGCAAT
GGCTTTATCAGTGTTCATTTGGCTCCTGGAAGTAAATTTAACTTCCAAAAGTATATCAAA
AGGTCATTAGAGGATGACTTCAAGGTAGTTGTTGGTGTCAGTCCAGTTTTGTGGGGATCG
TTTGTTGTTTTCTTGCTCCTAAATGTTAGTGGGTGGCATGCATTGTTCTGGGCATCCTTA
ATTCCTTTGATTATCATTTTAGCTGTTGGAACAAAGCTTCAGGCGGTGTTGACAAGAATG
GCTCTTGACATCTCGGAGAGACATGCAGTAGTCCAGGGAATCCCTCTTGTTCAAGGTTCA
GACAACTATTTTTGGTTTGGACGACCTCAGTTGGTTCTTCACCTCATCCATTTTGCCTTA
TTTCAGAATGCGTTCCAAATAACATATTTCTTATGGATATGGTATGAGTATGGGCTAAAA
TCTTGCTTCCATGACAAGTTTGGTTTCATCATTGCGAAAATTGCTTTGGGGGTGGGAGTT
TTATTCGTATGCAGCTATATCACTCTTCCACTCTATGCCCTTATTACTCAGATGGGCTCC
AACATGAAGAAATCCATTTTTGATGAACAAACCTCAAAGGCATTAAAGAAGTGGCATATG
GCGGTGAAGAAGAAGCAGGTAGCTAAGGGAGACAAATCTATACGGACACTAGGCAATGCA
AGTCCGAGGTCCTCTGTGGGCTCACCTCTACACCCGTCGATTGGTCCTACACTTCATCGG
TTTAAAACAACCGGTCACTCAACACGTTTCAATGGCTACGATGATCTAGAAGCATCTGAC
CTCGAGAATGATCCAACTACACCGATAATCCGTGCAGAGGAACACTCAACTGATCATGAT
GATACTGAACTTCAAGTGCATGTTCCTCAAAATGGAGAATCCTCCAGGAATGAAGACGAC
TTTTCGTTTGCGAAACCTGCTCCTAAAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040106
PEP Infomation

pacid=37425601 transcript=PGSC0003DMT400059600 locus=PGSC0003DMG400023159 ID=PGSC0003DMT400059600.v4.03 annot-version=v4.03
Sequence

MAGGGDGTSRQLDQTPTWAVAGVCAVIILISIALEKIIHKLGTWLTERHKKALFEALEKV
KAELMVLGFISLTLVFSQYYIAGICIPTSVANTLLPCPAVNKEDKTEEHRRRLLWHERRI
LAGAEPKCDDGRVSLISIDALHQIHILIFFLAVFHVVYSAITMWLGKLKIRGWKCWELET
STHNYEFSNDPSRFRLTHETSFVRAHTSFWTNIPIFFYIGCFLRQFFRSVNKSDYLTLRN
GFISVHLAPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWGSFVVFLLLNVSGWHALFWASL
IPLIIILAVGTKLQAVLTRMALDISERHAVVQGIPLVQGSDNYFWFGRPQLVLHLIHFAL
FQNAFQITYFLWIWYEYGLKSCFHDKFGFIIAKIALGVGVLFVCSYITLPLYALITQMGS
NMKKSIFDEQTSKALKKWHMAVKKKQVAKGDKSIRTLGNASPRSSVGSPLHPSIGPTLHR
FKTTGHSTRFNGYDDLEASDLENDPTTPIIRAEEHSTDHDDTELQVHVPQNGESSRNEDD
FSFAKPAPKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400059600
Transcript Infomation

pacid=37425601 locus=PGSC0003DMG400023159 ID=PGSC0003DMT400059600.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGGGGGTGATGGTACATCAAGACAGCTTGATCAGACACCTACTTGGGCAGTT
GCTGGTGTTTGTGCAGTCATTATTCTCATTTCTATTGCTTTGGAGAAGATTATCCATAAA
CTTGGCACTTGGCTCACAGAGAGGCATAAGAAAGCTCTATTTGAGGCTTTGGAAAAGGTT
AAGGCTGAGTTGATGGTTCTTGGTTTTATCTCATTAACCCTTGTGTTCAGCCAGTATTAT
ATTGCTGGAATCTGTATCCCCACAAGTGTGGCTAACACTCTGCTCCCTTGCCCTGCTGTT
AACAAAGAGGATAAAACGGAGGAACATCGCCGGAGGCTTTTATGGCATGAGCGCAGGATT
TTGGCTGGTGCAGAGCCTAAATGTGATGATGGACGAGTCTCTCTCATTTCTATCGACGCA
CTGCATCAAATACACATCCTTATCTTCTTTTTGGCGGTCTTTCATGTGGTATACAGTGCT
ATCACTATGTGGCTGGGAAAACTCAAGATTCGTGGCTGGAAATGCTGGGAACTAGAGACC
TCAACCCATAACTATGAGTTTTCAAATGATCCTTCAAGATTTAGGCTTACTCATGAGACA
TCATTTGTCAGAGCACATACTAGTTTCTGGACCAATATTCCAATCTTCTTTTACATTGGA
TGTTTCTTGAGACAATTTTTCAGGTCCGTGAATAAGTCAGACTACTTGACCCTCCGCAAT
GGCTTTATCAGTGTTCATTTGGCTCCTGGAAGTAAATTTAACTTCCAAAAGTATATCAAA
AGGTCATTAGAGGATGACTTCAAGGTAGTTGTTGGTGTCAGTCCAGTTTTGTGGGGATCG
TTTGTTGTTTTCTTGCTCCTAAATGTTAGTGGGTGGCATGCATTGTTCTGGGCATCCTTA
ATTCCTTTGATTATCATTTTAGCTGTTGGAACAAAGCTTCAGGCGGTGTTGACAAGAATG
GCTCTTGACATCTCGGAGAGACATGCAGTAGTCCAGGGAATCCCTCTTGTTCAAGGTTCA
GACAACTATTTTTGGTTTGGACGACCTCAGTTGGTTCTTCACCTCATCCATTTTGCCTTA
TTTCAGAATGCGTTCCAAATAACATATTTCTTATGGATATGGTATGAGTATGGGCTAAAA
TCTTGCTTCCATGACAAGTTTGGTTTCATCATTGCGAAAATTGCTTTGGGGGTGGGAGTT
TTATTCGTATGCAGCTATATCACTCTTCCACTCTATGCCCTTATTACTCAGATGGGCTCC
AACATGAAGAAATCCATTTTTGATGAACAAACCTCAAAGGCATTAAAGAAGTGGCATATG
GCGGTGAAGAAGAAGCAGGTAGCTAAGGGAGACAAATCTATACGGACACTAGGCAATGCA
AGTCCGAGGTCCTCTGTGGGCTCACCTCTACACCCGTCGATTGGTCCTACACTTCATCGG
TTTAAAACAACCGGTCACTCAACACGTTTCAATGGCTACGATGATCTAGAAGCATCTGAC
CTCGAGAATGATCCAACTACACCGATAATCCGTGCAGAGGAACACTCAACTGATCATGAT
GATACTGAACTTCAAGTGCATGTTCCTCAAAATGGAGAATCCTCCAGGAATGAAGACGAC
TTTTCGTTTGCGAAACCTGCTCCTAAAAGGTGA