Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059566
CDS Infomation

pacid=37470411 polypeptide=PGSC0003DMP400040088 locus=PGSC0003DMG400023144 ID=PGSC0003DMT400059566.v4.03 annot-version=v4.03
Sequence

ATGGCCACTAGAAGTGTTTTGCTCTCTTCTTCTTTTCTTCTCATTTTGCTTTCATTCTCT
TTGGAGAAAAGCAATGCTTTGGAAGGAAGAAAAACAATTGAATCCAACTTCCACACTATC
CAACTCACCTCTATTCTTCCTTCTTCTTCTTGCAAGCCTTCTAGCAAAGGTAAAAGAGGA
GGGACATCATTGGAGGTCATCAACAAACATGGGCCATGTTCTCAACTCAACAAAAAGGGT
GAAAAAGGCCAAACTTTAACAGAAATCTTGGCCCATGATCAAGCCCGAGTGGATTCAATC
CAAACCCGAATCGCAGCCCAAAACTTCAACCTATTCAGAAAGACAGAAAAAACCTCCAAA
AAGTACAGAGCAAAAGACTCAAAAACCACTCTCCCGGCGCAACCCGGCACCGCTCTTAGC
ACCGGAAACTACATCGTCACCATCGGAATCGGAACTCCGAAGAAGGATCTCACACTCATC
TTCGACACCGGCAGTGACCTTACATGGACTCAATGCGAACCCTGTTTCAAAACATGCTTT
CCTCAACAACAACCAATTTTCAACCCATCGTCTTCTTCGACTTATTCCAACATTTCCTGC
AGTTCCACAGCTTGTTCTGGGCTTAAATCAGCTACCGGAAATACTCCTCTTTGTTCTTCA
TCTACCTGCGTTTACGGTATCCAGTATGGTGATTCATCGTTCTCAATTGGGTTTTTCGCG
AAGGATAAGCTAACTTTATCAGCAACAGATGTGTTTGATGGATTTATGTTCGGTTGTGGG
CAAGATAACAAAGGATTATTCGGGAAAACCGCCGGATTAATCGGTTTAGGCAGGGATCCT
CTTTCTATTGTATCACAAACATCTGCGAAATTCGGGAAATACTTCTCTTACTGCCTTCCT
ACCAGAAGAGGATCTAATGGCCATTTAACCTTCGGCAAAAATGGAGCTAAATCGAACCTC
CAGTTCACACCATTCGCTTCATCACAAGGAACATCGTTTTACTTCATTGATGTATTGGGT
ATTTCTGTTGGTGGAAAAGCGTTAGCGATAAGTCCAATGGTGTTTAAGAACGCCGGAACA
ATCATTGATTCCGGTACTGTGATTACCCGATTACCTTCTACGGCGTATGCTAATATGCGA
GCAACTTTCCGGGAGTTCATGAGCAAGTATCCCAGAGCACCAGATCTATCTTTGCTTGAT
ACTTGCTATGATTTAAGCAATTACACTACCGTTAGCATTCCAAAAATCAGCTTCAACTTC
AATGGCAATACGAAGATGGACTTGGTTCCAAATGGTATTTTCTTCGTAAACGGTGCATCT
CAGGTTTGCTTGGCTTTCGCTTCAAATGGAGATGATGATAGTATTGGGATTTTCGGGAAC
ACACAACAGCAGACAATGGAGATTGTGTATGATGTTGCTGGTGAGAAATTAGGGTTTGGT
TATGGTGGATGTACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040088
PEP Infomation

pacid=37470411 transcript=PGSC0003DMT400059566 locus=PGSC0003DMG400023144 ID=PGSC0003DMT400059566.v4.03 annot-version=v4.03
Sequence

MATRSVLLSSSFLLILLSFSLEKSNALEGRKTIESNFHTIQLTSILPSSSCKPSSKGKRG
GTSLEVINKHGPCSQLNKKGEKGQTLTEILAHDQARVDSIQTRIAAQNFNLFRKTEKTSK
KYRAKDSKTTLPAQPGTALSTGNYIVTIGIGTPKKDLTLIFDTGSDLTWTQCEPCFKTCF
PQQQPIFNPSSSSTYSNISCSSTACSGLKSATGNTPLCSSSTCVYGIQYGDSSFSIGFFA
KDKLTLSATDVFDGFMFGCGQDNKGLFGKTAGLIGLGRDPLSIVSQTSAKFGKYFSYCLP
TRRGSNGHLTFGKNGAKSNLQFTPFASSQGTSFYFIDVLGISVGGKALAISPMVFKNAGT
IIDSGTVITRLPSTAYANMRATFREFMSKYPRAPDLSLLDTCYDLSNYTTVSIPKISFNF
NGNTKMDLVPNGIFFVNGASQVCLAFASNGDDDSIGIFGNTQQQTMEIVYDVAGEKLGFG
YGGCT*

Transcript Sequence

Transcript ID

PGSC0003DMT400059566
Transcript Infomation

pacid=37470411 locus=PGSC0003DMG400023144 ID=PGSC0003DMT400059566.v4.03 annot-version=v4.03
Sequence

ATGGCCACTAGAAGTGTTTTGCTCTCTTCTTCTTTTCTTCTCATTTTGCTTTCATTCTCT
TTGGAGAAAAGCAATGCTTTGGAAGGAAGAAAAACAATTGAATCCAACTTCCACACTATC
CAACTCACCTCTATTCTTCCTTCTTCTTCTTGCAAGCCTTCTAGCAAAGGTAAAAGAGGA
GGGACATCATTGGAGGTCATCAACAAACATGGGCCATGTTCTCAACTCAACAAAAAGGGT
GAAAAAGGCCAAACTTTAACAGAAATCTTGGCCCATGATCAAGCCCGAGTGGATTCAATC
CAAACCCGAATCGCAGCCCAAAACTTCAACCTATTCAGAAAGACAGAAAAAACCTCCAAA
AAGTACAGAGCAAAAGACTCAAAAACCACTCTCCCGGCGCAACCCGGCACCGCTCTTAGC
ACCGGAAACTACATCGTCACCATCGGAATCGGAACTCCGAAGAAGGATCTCACACTCATC
TTCGACACCGGCAGTGACCTTACATGGACTCAATGCGAACCCTGTTTCAAAACATGCTTT
CCTCAACAACAACCAATTTTCAACCCATCGTCTTCTTCGACTTATTCCAACATTTCCTGC
AGTTCCACAGCTTGTTCTGGGCTTAAATCAGCTACCGGAAATACTCCTCTTTGTTCTTCA
TCTACCTGCGTTTACGGTATCCAGTATGGTGATTCATCGTTCTCAATTGGGTTTTTCGCG
AAGGATAAGCTAACTTTATCAGCAACAGATGTGTTTGATGGATTTATGTTCGGTTGTGGG
CAAGATAACAAAGGATTATTCGGGAAAACCGCCGGATTAATCGGTTTAGGCAGGGATCCT
CTTTCTATTGTATCACAAACATCTGCGAAATTCGGGAAATACTTCTCTTACTGCCTTCCT
ACCAGAAGAGGATCTAATGGCCATTTAACCTTCGGCAAAAATGGAGCTAAATCGAACCTC
CAGTTCACACCATTCGCTTCATCACAAGGAACATCGTTTTACTTCATTGATGTATTGGGT
ATTTCTGTTGGTGGAAAAGCGTTAGCGATAAGTCCAATGGTGTTTAAGAACGCCGGAACA
ATCATTGATTCCGGTACTGTGATTACCCGATTACCTTCTACGGCGTATGCTAATATGCGA
GCAACTTTCCGGGAGTTCATGAGCAAGTATCCCAGAGCACCAGATCTATCTTTGCTTGAT
ACTTGCTATGATTTAAGCAATTACACTACCGTTAGCATTCCAAAAATCAGCTTCAACTTC
AATGGCAATACGAAGATGGACTTGGTTCCAAATGGTATTTTCTTCGTAAACGGTGCATCT
CAGGTTTGCTTGGCTTTCGCTTCAAATGGAGATGATGATAGTATTGGGATTTTCGGGAAC
ACACAACAGCAGACAATGGAGATTGTGTATGATGTTGCTGGTGAGAAATTAGGGTTTGGT
TATGGTGGATGTACTTGA