Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400059452
CDS Infomation

pacid=37456726 polypeptide=PGSC0003DMP400040014 locus=PGSC0003DMG400023098 ID=PGSC0003DMT400059452.v4.03 annot-version=v4.03
Sequence

ATGGTTCGGTTAAGATCAATTTTGCTTTTTCTTCTGCTCTTTAAGAGTTTCGGGTCAATT
ATTGCCGAAGAGGAAGATCAAATTGAACAGTTCTCGGAAGCACTCTTGTTGAGGCCATTG
CCAGATCGTAAAGTGCTTGCCCATTTTCATTTCGAAAGTAAAGTCCCACCAACTCGAACA
CATGGCAGCCACCACCATCTTTTCCCCAAATCCATTTATCAGCTGGTCCATAAATTTAGA
GTTCGAGAAATGGAGCTGTCGTTCACACAAGGTCGCTGGAATTATGCACGCTGGGGTGGA
CATGATCCCATTTCAAGTAGAAATGCGAAGCCTCCTGGAGTTGAACTGTGGGCTACTTTT
GATGTTCCACAACATCAGGTCGACGCTTCATGGAGAAATTTAACACATGCTCTTTCAGGG
CTCTTTTGTGCTTCTATTAACTTCCTAGAGTCATCAACTGCTTATTCTTCTCCCCAATGG
AGCTTCAAGTCATTTGCTACAAATATCAGGTACGGCACCTTGCCCCGTGAGGCTGTTTGC
ACAGAGAACCTCACTCCTTGGCTAAAGTTGCTTCCTTGCCGAGACAAAGCTGGACTTTCT
GCATTGATGGACAGACCTTCTATCTACCGAGGATTTTATCACTCTCAGAGGTTGCATTTA
GTCTCAAATGAATTTGATCTAGCTGCAGCAAGTTCTGGAATGGTGCTTGAACAGACACTT
ACTGTTGTTCTCCAACCGGTTACTTTAGGAAGTGGCATGACATCATCTGTTGCAATACAG
CAACCAAGTTGGTCACTGAGCTCATTGTTTGGACGGAAAGTTAGTGGAAGGTGTGTTCTT
TCAAATGCTAGTAATGTGTATGTCCAATTAGAGCCAGATTTGGTGTCTGAATTGAAGACT
ATTTCAGAGACGCAACAACAATCTGATGTTGAGAATTTGATTGCTCAAGCTTGGAGTGAC
ACGAGCTTTGAAATGTCTGAGTCTGCAGTCAGGGTAATTCAAGAAGCCAATGGCTTTCAG
AAGGAGTCATCCCTTCTGTATGAATTTTCTCTAGAAAATTTTAGTGATTCAAAGCCATTC
GACTTGGAGTTCAGGTGGAAGCGTCCCGTGACATGGTCATCTCAACTGGCACCCTTGCAG
GCTCGCAGGTTCCTTATGGGAAGTGGGAATGAAAGGGGTGCCATAGCCATCTCCTTGAAG
TCTGTAGGAAGAAGTGAGTATGCAAAATCTTCTGTCAACGAGGAAGGAAGATGCTCGTTA
CGGGTTGATCTGTTCCAAGTTGTGCCTTGGTATGTCAAGGTTTATTACCACACGCTTAAA
GTGTTTCTAGATGAACGTCTTCACAGTTTAGCAGATGTTGTAGAAAGGACAAATGTTTCG
CCTTCTGAAGACAAGGTTTCTCCTGGGCTAATGGAAATAGCATTGCGATTGCCATGTGAT
GTGCACTCGGTGATATTGACATTGGAGTTTGATAAGGGTTTTCTGCACATCGATGAGTAT
CCTCCAGATGCTAACCAGGGATTTGACATTCCATCAGCTTTAATCAGGTTTCCTGAGATC
AAAACAAAGATGCATTTATTTGAGGATAAATCTGCTTGCAAGTCACCTATCTTATCCAAG
CTACAGGAAGAAAGCCCTGTTCTATGGTACACAGAAGTATTGCTTGTACCCTTGACCACT
CCTGATTTTAGCATGCCATACAATGTTATCACAATTACGTGCACTGTATTTGCTCTATAT
TTTGGATCACTGCTTAATGCGTTACGTAGGCGTGTTGAAGAGGAGGAGAGGCTTCTGAAA
AGTAAAGCTGCCATGCCCAGTGGTCCGATAGGCGTGCTACTGTCCAAGTTATCAGCTAAA
TTGAGAGGAAAACCGTTGGAACCACCACCCCCATCCTCTTCATCTAAAGTCAGTTATAAG
CTGATTCTCAGAGTGATACTGGTGGCTGGTATTGCTGCTGCTTGGCAGTACTTCTATGGA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400040014
PEP Infomation

pacid=37456726 transcript=PGSC0003DMT400059452 locus=PGSC0003DMG400023098 ID=PGSC0003DMT400059452.v4.03 annot-version=v4.03
Sequence

MVRLRSILLFLLLFKSFGSIIAEEEDQIEQFSEALLLRPLPDRKVLAHFHFESKVPPTRT
HGSHHHLFPKSIYQLVHKFRVREMELSFTQGRWNYARWGGHDPISSRNAKPPGVELWATF
DVPQHQVDASWRNLTHALSGLFCASINFLESSTAYSSPQWSFKSFATNIRYGTLPREAVC
TENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLHLVSNEFDLAAASSGMVLEQTL
TVVLQPVTLGSGMTSSVAIQQPSWSLSSLFGRKVSGRCVLSNASNVYVQLEPDLVSELKT
ISETQQQSDVENLIAQAWSDTSFEMSESAVRVIQEANGFQKESSLLYEFSLENFSDSKPF
DLEFRWKRPVTWSSQLAPLQARRFLMGSGNERGAIAISLKSVGRSEYAKSSVNEEGRCSL
RVDLFQVVPWYVKVYYHTLKVFLDERLHSLADVVERTNVSPSEDKVSPGLMEIALRLPCD
VHSVILTLEFDKGFLHIDEYPPDANQGFDIPSALIRFPEIKTKMHLFEDKSACKSPILSK
LQEESPVLWYTEVLLVPLTTPDFSMPYNVITITCTVFALYFGSLLNALRRRVEEEERLLK
SKAAMPSGPIGVLLSKLSAKLRGKPLEPPPPSSSSKVSYKLILRVILVAGIAAAWQYFYG
*

Transcript Sequence

Transcript ID

PGSC0003DMT400059452
Transcript Infomation

pacid=37456726 locus=PGSC0003DMG400023098 ID=PGSC0003DMT400059452.v4.03 annot-version=v4.03
Sequence

ATGGTTCGGTTAAGATCAATTTTGCTTTTTCTTCTGCTCTTTAAGAGTTTCGGGTCAATT
ATTGCCGAAGAGGAAGATCAAATTGAACAGTTCTCGGAAGCACTCTTGTTGAGGCCATTG
CCAGATCGTAAAGTGCTTGCCCATTTTCATTTCGAAAGTAAAGTCCCACCAACTCGAACA
CATGGCAGCCACCACCATCTTTTCCCCAAATCCATTTATCAGCTGGTCCATAAATTTAGA
GTTCGAGAAATGGAGCTGTCGTTCACACAAGGTCGCTGGAATTATGCACGCTGGGGTGGA
CATGATCCCATTTCAAGTAGAAATGCGAAGCCTCCTGGAGTTGAACTGTGGGCTACTTTT
GATGTTCCACAACATCAGGTCGACGCTTCATGGAGAAATTTAACACATGCTCTTTCAGGG
CTCTTTTGTGCTTCTATTAACTTCCTAGAGTCATCAACTGCTTATTCTTCTCCCCAATGG
AGCTTCAAGTCATTTGCTACAAATATCAGGTACGGCACCTTGCCCCGTGAGGCTGTTTGC
ACAGAGAACCTCACTCCTTGGCTAAAGTTGCTTCCTTGCCGAGACAAAGCTGGACTTTCT
GCATTGATGGACAGACCTTCTATCTACCGAGGATTTTATCACTCTCAGAGGTTGCATTTA
GTCTCAAATGAATTTGATCTAGCTGCAGCAAGTTCTGGAATGGTGCTTGAACAGACACTT
ACTGTTGTTCTCCAACCGGTTACTTTAGGAAGTGGCATGACATCATCTGTTGCAATACAG
CAACCAAGTTGGTCACTGAGCTCATTGTTTGGACGGAAAGTTAGTGGAAGGTGTGTTCTT
TCAAATGCTAGTAATGTGTATGTCCAATTAGAGCCAGATTTGGTGTCTGAATTGAAGACT
ATTTCAGAGACGCAACAACAATCTGATGTTGAGAATTTGATTGCTCAAGCTTGGAGTGAC
ACGAGCTTTGAAATGTCTGAGTCTGCAGTCAGGGTAATTCAAGAAGCCAATGGCTTTCAG
AAGGAGTCATCCCTTCTGTATGAATTTTCTCTAGAAAATTTTAGTGATTCAAAGCCATTC
GACTTGGAGTTCAGGTGGAAGCGTCCCGTGACATGGTCATCTCAACTGGCACCCTTGCAG
GCTCGCAGGTTCCTTATGGGAAGTGGGAATGAAAGGGGTGCCATAGCCATCTCCTTGAAG
TCTGTAGGAAGAAGTGAGTATGCAAAATCTTCTGTCAACGAGGAAGGAAGATGCTCGTTA
CGGGTTGATCTGTTCCAAGTTGTGCCTTGGTATGTCAAGGTTTATTACCACACGCTTAAA
GTGTTTCTAGATGAACGTCTTCACAGTTTAGCAGATGTTGTAGAAAGGACAAATGTTTCG
CCTTCTGAAGACAAGGTTTCTCCTGGGCTAATGGAAATAGCATTGCGATTGCCATGTGAT
GTGCACTCGGTGATATTGACATTGGAGTTTGATAAGGGTTTTCTGCACATCGATGAGTAT
CCTCCAGATGCTAACCAGGGATTTGACATTCCATCAGCTTTAATCAGGTTTCCTGAGATC
AAAACAAAGATGCATTTATTTGAGGATAAATCTGCTTGCAAGTCACCTATCTTATCCAAG
CTACAGGAAGAAAGCCCTGTTCTATGGTACACAGAAGTATTGCTTGTACCCTTGACCACT
CCTGATTTTAGCATGCCATACAATGTTATCACAATTACGTGCACTGTATTTGCTCTATAT
TTTGGATCACTGCTTAATGCGTTACGTAGGCGTGTTGAAGAGGAGGAGAGGCTTCTGAAA
AGTAAAGCTGCCATGCCCAGTGGTCCGATAGGCGTGCTACTGTCCAAGTTATCAGCTAAA
TTGAGAGGAAAACCGTTGGAACCACCACCCCCATCCTCTTCATCTAAAGTCAGTTATAAG
CTGATTCTCAGAGTGATACTGGTGGCTGGTATTGCTGCTGCTTGGCAGTACTTCTATGGA
TGA